RNA–Protein interactions for RNA: YGL120C

PRP43, Transcript of RNA helicase in the DEAH-box family, yeast

Gene PRP43, Length 2,304 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP43	YGL120C	SRO77	P38163	1010 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	NCL1	P38205	684 aa	Known RBP	4.64	□□□□□ -1.67
PRP43	YGL120C	FMP23	P38231	175 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	YBR071W	P38243	211 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	SHE3	P38272	425 aa	Known RBP	4.64	□□□□□ -1.67
PRP43	YGL120C	SEC72	P39742	193 aa	Known RBP	4.64	□□□□□ -1.67
PRP43	YGL120C	EXO1	P39875	702 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	LSM4	P40070	187 aa	Known RBP	4.64	□□□□□ -1.67
PRP43	YGL120C	FAU1	P40099	211 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	TIR3	P40552	269 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	HXT8	P40886	569 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	ARC1	P46672	376 aa	Known RBP	4.64	□□□□□ -1.67
PRP43	YGL120C	SWC4	P53201	476 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	YGR117C	P53270	476 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	BUD17	P53727	317 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	YNR065C	P53751	1116 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	NUP116	Q02630	1113 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	UGO1	Q03327	502 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	EFR3	Q03653	782 aa	Known RBP	4.64	□□□□□ -1.67
PRP43	YGL120C	YDR109C	Q04585	715 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	ADY4	Q05955	493 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	PFK27	Q12471	397 aa	Predicted RBP	4.64	□□□□□ -1.67
PRP43	YGL120C	ARG82	P07250	355 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	COR1	P07256	457 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
PRP43	YGL120C	CBS1	P14066	229 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	RBK1	P25332	333 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	DEG1	P31115	442 aa	Known RBP	4.64	□□□□□ -1.67
PRP43	YGL120C	PGM1	P33401	570 aa	Known RBP	4.64	□□□□□ -1.67
PRP43	YGL120C	EFM1	P38732	585 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	UBP5	P39944	805 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	YEL025C	P39991	1188 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	YMR147W	P40218	223 aa	Known RBP	4.64	□□□□□ -1.67
PRP43	YGL120C	ADO1	P47143	340 aa	Known RBP	4.64	□□□□□ -1.67
PRP43	YGL120C	RPS12	P48589	143 aa	Known RBP	4.64	□□□□□ -1.67
PRP43	YGL120C	CTF18	P49956	741 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	ACS2	P52910	683 aa	Known RBP	4.64	□□□□□ -1.67
PRP43	YGL120C	OCA2	P53949	197 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	TIM44	Q01852	431 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	YSA1	Q01976	231 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	MSC1	Q03104	513 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	SNU56	Q03782	492 aa	Known RBP	4.64	□□□□□ -1.67
PRP43	YGL120C	YAP6	Q03935	383 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	MRX10	Q05648	414 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	RAD34	Q06665	692 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	CDA1	Q06702	301 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	YPL257W	Q08974	193 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	ATX2	Q12067	313 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	HRT3	Q12347	344 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	ATP14	Q12349	124 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	RRD2	Q12461	358 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	AFI1	Q99222	893 aa		4.64	□□□□□ -1.67
PRP43	YGL120C	AI3	P03877	415 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	CDC7	P06243	507 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	TRP4	P07285	380 aa	Predicted RBP	4.63	□□□□□ -1.67
PRP43	YGL120C	HEM15	P16622	393 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	CSM1	P25651	190 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	SBA1	P28707	216 aa	Known RBP	4.63	□□□□□ -1.67
PRP43	YGL120C	LDS1	P31379	325 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	FAT1	P38225	669 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	YBR220C	P38318	560 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	MGE1	P38523	228 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	YHL041W	P38730	149 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	WSS1	P38838	269 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	PLB1	P39105	664 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	MRK1	P50873	501 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	DUO1	P53168	247 aa	Known RBP	4.63	□□□□□ -1.67
PRP43	YGL120C	PEX29	Q03370	554 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	YOL075C	Q08234	1294 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	YOL107W	Q12239	342 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	SUL2	Q12325	893 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	PDH1	Q12428	516 aa	Known RBP	4.63	□□□□□ -1.67
PRP43	YGL120C	SNF8	Q12483	233 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	AI5_ALPHA	Q9ZZX1	630 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	RRP5	Q05022	1729 aa	Known RBP	4.63	□□□□□ -1.67
PRP43	YGL120C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
PRP43	YGL120C	PEP5	P12868	1029 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	ARE1	P25628	610 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	AHC2	P25649	128 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	ARO7	P32178	256 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	RNP1	P32385	249 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	HYM1	P32464	399 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	CBT1	P36038	271 aa	Predicted RBP	4.63	□□□□□ -1.67
PRP43	YGL120C	APN2	P38207	520 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	ECM8	P38246	354 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	DIA4	P38705	446 aa	Predicted RBP	4.63	□□□□□ -1.67
PRP43	YGL120C	GPP2	P40106	250 aa	Known RBP	4.63	□□□□□ -1.67
PRP43	YGL120C	ATF1	P40353	525 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	OPT1	P40897	799 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	EMW1	P42842	904 aa	Known RBP	4.63	□□□□□ -1.67
PRP43	YGL120C	SLS1	P42900	643 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	YGR201C	P42936	225 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	SPT20	P50875	604 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	YTP1	P53584	459 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	MPP6	P53725	186 aa	Predicted RBP	4.63	□□□□□ -1.67
PRP43	YGL120C	NOG2	P53742	486 aa	Known RBP	4.63	□□□□□ -1.67
PRP43	YGL120C	MRP51	Q02950	344 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	MYO5	Q04439	1219 aa	Known RBP	4.63	□□□□□ -1.67
PRP43	YGL120C	CSC1	Q06538	782 aa		4.63	□□□□□ -1.67
PRP43	YGL120C	SVS1	Q12254	260 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms