RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C ULP2P40537 1034 aaPredicted RBP1.25□□□□□ -2.21
SWI4YER111C SAS2P40963 338 aa1.25□□□□□ -2.21
SWI4YER111C ELP2P42935 788 aa1.25□□□□□ -2.21
SWI4YER111C SCD6P45978 349 aaKnown RBP RIP-Chip data1.25□□□□□ -2.21 RIP-Chip
SWI4YER111C YHC3P47040 408 aa1.25□□□□□ -2.21
SWI4YER111C MLC1P53141 149 aa1.25□□□□□ -2.21
SWI4YER111C NUP100Q02629 959 aa1.25□□□□□ -2.21
SWI4YER111C HSP31Q04432 237 aa1.25□□□□□ -2.21
SWI4YER111C ECI1Q05871 280 aa1.25□□□□□ -2.21
SWI4YER111C MUM3Q08750 479 aa1.25□□□□□ -2.21
SWI4YER111C YOR365CQ08844 703 aa1.25□□□□□ -2.21
SWI4YER111C NCE102Q12207 173 aaRIP-Chip data1.25□□□□□ -2.21not detected
SWI4YER111C LSP1Q12230 341 aaKnown RBP1.25□□□□□ -2.21
SWI4YER111C SKS1Q12505 502 aa1.25□□□□□ -2.21
SWI4YER111C CSR2Q12734 1121 aa1.25□□□□□ -2.21
SWI4YER111C RIP1P08067 215 aa1.25□□□□□ -2.21
SWI4YER111C ALG1P16661 449 aa1.25□□□□□ -2.21
SWI4YER111C DAP2P18962 818 aa1.25□□□□□ -2.21
SWI4YER111C SLM5P25345 492 aaKnown RBP1.25□□□□□ -2.21
SWI4YER111C FRE1P32791 686 aa1.25□□□□□ -2.21
SWI4YER111C VPS17P32913 551 aa1.25□□□□□ -2.21
SWI4YER111C YCR041WP37265 110 aa1.25□□□□□ -2.21
SWI4YER111C YPK3P38070 525 aa1.25□□□□□ -2.21
SWI4YER111C YBR056WP38081 501 aa1.25□□□□□ -2.21
SWI4YER111C ADH5P38113 351 aaKnown RBP1.25□□□□□ -2.21
SWI4YER111C YBL028CP38202 106 aa1.25□□□□□ -2.21
SWI4YER111C SPP381P38282 291 aaPredicted RBP1.25□□□□□ -2.21
SWI4YER111C PHO90P39535 881 aa1.25□□□□□ -2.21
SWI4YER111C YER079WP40052 210 aaKnown RBP1.25□□□□□ -2.21
SWI4YER111C SNL1P40548 159 aa1.25□□□□□ -2.21
SWI4YER111C RTS2P40962 232 aa1.25□□□□□ -2.21
SWI4YER111C VMA13P41807 478 aaKnown RBP1.25□□□□□ -2.21
SWI4YER111C PRM1P53835 661 aa1.25□□□□□ -2.21
SWI4YER111C YNL181WP53878 407 aa1.25□□□□□ -2.21
SWI4YER111C SLD5Q03406 294 aa1.25□□□□□ -2.21
SWI4YER111C MSS11Q03825 758 aa1.25□□□□□ -2.21
SWI4YER111C VTI1Q04338 217 aa1.25□□□□□ -2.21
SWI4YER111C UBX3Q12229 455 aa1.25□□□□□ -2.21
SWI4YER111C VTH1P40438 1549 aa1.25□□□□□ -2.21
SWI4YER111C VTH2P40890 1549 aa1.25□□□□□ -2.21
SWI4YER111C PGK1P00560 416 aaKnown RBP1.25□□□□□ -2.21
SWI4YER111C RPC40P07703 335 aaKnown RBP1.25□□□□□ -2.21
SWI4YER111C SPO12P17123 173 aa1.25□□□□□ -2.21
SWI4YER111C GID7P25569 745 aa1.25□□□□□ -2.21
SWI4YER111C PRP21P32524 280 aaPredicted RBP1.25□□□□□ -2.21
SWI4YER111C NRP1P32770 719 aaKnown RBP RIP-Chip data1.25□□□□□ -2.21not detected
SWI4YER111C EFM2P38347 419 aa1.25□□□□□ -2.21
SWI4YER111C IAH1P41734 238 aa1.25□□□□□ -2.21
SWI4YER111C PSA1P41940 361 aaKnown RBP1.25□□□□□ -2.21
SWI4YER111C TRS85P46944 698 aa1.25□□□□□ -2.21
SWI4YER111C ECM27P47144 725 aa1.25□□□□□ -2.21
SWI4YER111C ASN2P49090 572 aaKnown RBP1.25□□□□□ -2.21
SWI4YER111C ESBP6P53918 673 aa1.25□□□□□ -2.21
SWI4YER111C STP1Q00947 519 aa1.25□□□□□ -2.21
SWI4YER111C RIM13Q03792 727 aa1.25□□□□□ -2.21
SWI4YER111C PEX27Q08580 376 aa1.25□□□□□ -2.21
SWI4YER111C BSC1Q12140 328 aa1.25□□□□□ -2.21
SWI4YER111C PSY3Q12318 242 aa1.25□□□□□ -2.21
SWI4YER111C SCH9P11792 824 aaKnown RBP1.24□□□□□ -2.21
SWI4YER111C TAL1P15019 335 aaKnown RBP1.24□□□□□ -2.21
SWI4YER111C RPS2P25443 254 aaKnown RBP1.24□□□□□ -2.21
SWI4YER111C YCR100CP25606 316 aa1.24□□□□□ -2.21
SWI4YER111C HSP104P31539 908 aaKnown RBP1.24□□□□□ -2.21
SWI4YER111C ACH1P32316 526 aa1.24□□□□□ -2.21
SWI4YER111C PTK1P36002 662 aaPredicted RBP1.24□□□□□ -2.21
SWI4YER111C FRE2P36033 711 aa1.24□□□□□ -2.21
SWI4YER111C MIC60P36112 540 aa1.24□□□□□ -2.21
SWI4YER111C PCA1P38360 1216 aa1.24□□□□□ -2.21
SWI4YER111C OSH3P38713 996 aaKnown RBP1.24□□□□□ -2.21
SWI4YER111C END3P39013 349 aa1.24□□□□□ -2.21
SWI4YER111C VPS52P39904 641 aa1.24□□□□□ -2.21
SWI4YER111C PCL7P40186 285 aa1.24□□□□□ -2.21
SWI4YER111C OSW5P40219 148 aa1.24□□□□□ -2.21
SWI4YER111C RPA34P47006 233 aaPredicted RBP1.24□□□□□ -2.21
SWI4YER111C MDV1P47025 714 aa1.24□□□□□ -2.21
SWI4YER111C YJR011CP47086 261 aaPredicted RBP1.24□□□□□ -2.21
SWI4YER111C SAM50P53969 484 aa1.24□□□□□ -2.21
SWI4YER111C SLG1P54867 378 aa1.24□□□□□ -2.21
SWI4YER111C RHO4Q00246 291 aa1.24□□□□□ -2.21
SWI4YER111C IRC15Q02733 499 aa1.24□□□□□ -2.21
SWI4YER111C DIG1Q03063 452 aaKnown RBP1.24□□□□□ -2.21
SWI4YER111C BET5Q03630 159 aa1.24□□□□□ -2.21
SWI4YER111C SMA2Q04658 369 aa1.24□□□□□ -2.21
SWI4YER111C MRPL51Q06090 140 aaPredicted RBP1.24□□□□□ -2.21
SWI4YER111C YFH1Q07540 174 aa1.24□□□□□ -2.21
SWI4YER111C APL5Q08951 932 aaKnown RBP1.24□□□□□ -2.21
SWI4YER111C BUG1Q12191 341 aa1.24□□□□□ -2.21
SWI4YER111C RKM5Q12367 367 aa1.24□□□□□ -2.21
SWI4YER111C ARP6Q12509 438 aa1.24□□□□□ -2.21
SWI4YER111C YOR1P53049 1477 aa1.24□□□□□ -2.21
SWI4YER111C IQG1Q12280 1495 aa1.24□□□□□ -2.21
SWI4YER111C ILV5P06168 395 aaKnown RBP1.24□□□□□ -2.21
SWI4YER111C GAL7P08431 366 aa1.24□□□□□ -2.21
SWI4YER111C NFT1P0CE68 1218 aa1.24□□□□□ -2.21
SWI4YER111C UBA1P22515 1024 aaKnown RBP1.24□□□□□ -2.21
SWI4YER111C BUB3P26449 341 aa1.24□□□□□ -2.21
SWI4YER111C SIN4P32259 974 aa1.24□□□□□ -2.21
SWI4YER111C YEL043WP32618 956 aa1.24□□□□□ -2.21
SWI4YER111C UTR4P32626 227 aa1.24□□□□□ -2.21
SWI4YER111C UIP5P36137 443 aa1.24□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms