RNA–Protein interactions for RNA: YEL019C

MMS21, Transcript of SUMO ligase and component of the SMC5-SMC6 complex, yeast

Gene MMS21, Length 804 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MMS21	YEL019C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
MMS21	YEL019C	SMY1	P32364	656 aa	Known RBP	4.92	□□□□□ -1.62
MMS21	YEL019C	MIX23	P38162	196 aa		4.92	□□□□□ -1.62
MMS21	YEL019C	YNR048W	P53740	393 aa		4.92	□□□□□ -1.62
MMS21	YEL019C	IBD2	P53892	351 aa		4.92	□□□□□ -1.62
MMS21	YEL019C	SCW10	Q04951	389 aa		4.92	□□□□□ -1.62
MMS21	YEL019C	TEF1	P02994	458 aa	Known RBP	4.91	□□□□□ -1.62
MMS21	YEL019C	SPO7	P18410	259 aa		4.91	□□□□□ -1.62
MMS21	YEL019C	RRN10	P38204	145 aa		4.91	□□□□□ -1.62
MMS21	YEL019C	SER3	P40054	469 aa		4.91	□□□□□ -1.62
MMS21	YEL019C	PHO86	P46956	311 aa		4.91	□□□□□ -1.62
MMS21	YEL019C	PHB2	P50085	310 aa		4.91	□□□□□ -1.62
MMS21	YEL019C	YML6	P51998	286 aa		4.91	□□□□□ -1.62
MMS21	YEL019C	OCA2	P53949	197 aa		4.91	□□□□□ -1.62
MMS21	YEL019C	BET5	Q03630	159 aa		4.91	□□□□□ -1.62
MMS21	YEL019C	BUG1	Q12191	341 aa		4.91	□□□□□ -1.62
MMS21	YEL019C	YLR108C	Q12259	485 aa		4.91	□□□□□ -1.62
MMS21	YEL019C	RAD61	Q99359	647 aa		4.91	□□□□□ -1.62
MMS21	YEL019C	ILV5	P06168	395 aa	Known RBP	4.9	□□□□□ -1.63
MMS21	YEL019C	CBS2	P14905	389 aa		4.9	□□□□□ -1.63
MMS21	YEL019C	SLY1	P22213	666 aa		4.9	□□□□□ -1.63
MMS21	YEL019C	CTR86	P25355	563 aa		4.9	□□□□□ -1.63
MMS21	YEL019C	LSB5	P25369	354 aa		4.9	□□□□□ -1.63
MMS21	YEL019C	RGT1	P32862	1170 aa		4.9	□□□□□ -1.63
MMS21	YEL019C	RRP4	P38792	359 aa	Known RBP	4.9	□□□□□ -1.63
MMS21	YEL019C	YIL067C	P40514	678 aa		4.9	□□□□□ -1.63
MMS21	YEL019C	HXT11	P54862	567 aa		4.9	□□□□□ -1.63
MMS21	YEL019C	GIP3	Q03016	1276 aa		4.9	□□□□□ -1.63
MMS21	YEL019C	SGT1	Q08446	395 aa		4.9	□□□□□ -1.63
MMS21	YEL019C	SKI7	Q08491	747 aa	Predicted RBP	4.9	□□□□□ -1.63
MMS21	YEL019C	MED2	Q12124	431 aa		4.9	□□□□□ -1.63
MMS21	YEL019C	RRP12	Q12754	1228 aa	Known RBP	4.9	□□□□□ -1.63
MMS21	YEL019C	ARO3	P14843	370 aa	Known RBP	4.89	□□□□□ -1.63
MMS21	YEL019C	SPS22	P25380	463 aa		4.89	□□□□□ -1.63
MMS21	YEL019C	WWM1	P43582	211 aa	Known RBP	4.89	□□□□□ -1.63
MMS21	YEL019C	RSC1	P53236	928 aa		4.89	□□□□□ -1.63
MMS21	YEL019C	YGR111W	P53265	400 aa		4.89	□□□□□ -1.63
MMS21	YEL019C	RSN1	Q03516	953 aa		4.89	□□□□□ -1.63
MMS21	YEL019C	RRN11	Q04712	507 aa		4.89	□□□□□ -1.63
MMS21	YEL019C	HEL2	Q05580	639 aa	Known RBP	4.89	□□□□□ -1.63
MMS21	YEL019C	ESA1	Q08649	445 aa		4.89	□□□□□ -1.63
MMS21	YEL019C	AEP3	Q12089	606 aa		4.89	□□□□□ -1.63
MMS21	YEL019C	CPR4	P25334	318 aa		4.88	□□□□□ -1.63
MMS21	YEL019C	FAA2	P39518	744 aa		4.88	□□□□□ -1.63
MMS21	YEL019C	CIK1	Q01649	594 aa		4.88	□□□□□ -1.63
MMS21	YEL019C	TAF12	Q03761	539 aa		4.88	□□□□□ -1.63
MMS21	YEL019C	PPM1	Q04081	328 aa		4.88	□□□□□ -1.63
MMS21	YEL019C	GYL1	Q04322	720 aa		4.88	□□□□□ -1.63
MMS21	YEL019C	GPM3	Q12326	303 aa		4.88	□□□□□ -1.63
MMS21	YEL019C	RMD5	Q12508	421 aa		4.88	□□□□□ -1.63
MMS21	YEL019C	MTR10	Q99189	972 aa		4.88	□□□□□ -1.63
MMS21	YEL019C	NDT80	P38830	627 aa		4.87	□□□□□ -1.63
MMS21	YEL019C	YAL037W	P39728	267 aa		4.87	□□□□□ -1.63
MMS21	YEL019C	NCA3	P46955	337 aa		4.87	□□□□□ -1.63
MMS21	YEL019C	GPI15	P53961	229 aa		4.87	□□□□□ -1.63
MMS21	YEL019C	YMR181C	Q03231	154 aa		4.87	□□□□□ -1.63
MMS21	YEL019C	PBA1	Q05778	276 aa		4.87	□□□□□ -1.63
MMS21	YEL019C	SNX3	Q08826	162 aa	Known RBP	4.87	□□□□□ -1.63
MMS21	YEL019C	YOR387C	Q08910	206 aa		4.87	□□□□□ -1.63
MMS21	YEL019C	SPO12	P17123	173 aa		4.86	□□□□□ -1.63
MMS21	YEL019C	DEG1	P31115	442 aa	Known RBP	4.86	□□□□□ -1.63
MMS21	YEL019C	AVT5	P38176	459 aa		4.86	□□□□□ -1.63
MMS21	YEL019C	MTC6	P38849	526 aa		4.86	□□□□□ -1.63
MMS21	YEL019C	VHS2	P40463	436 aa		4.86	□□□□□ -1.63
MMS21	YEL019C	SMA2	Q04658	369 aa		4.86	□□□□□ -1.63
MMS21	YEL019C	TLG2	Q08144	397 aa		4.86	□□□□□ -1.63
MMS21	YEL019C	DCI1	Q08558	271 aa		4.86	□□□□□ -1.63
MMS21	YEL019C	COX3	P00420	269 aa		4.85	□□□□□ -1.63
MMS21	YEL019C	ADE4	P04046	510 aa	Known RBP	4.85	□□□□□ -1.63
MMS21	YEL019C	SDH3	P33421	198 aa		4.85	□□□□□ -1.63
MMS21	YEL019C	YBL059W	P34224	193 aa		4.85	□□□□□ -1.63
MMS21	YEL019C	KKQ8	P36004	724 aa		4.85	□□□□□ -1.63
MMS21	YEL019C	ASC1	P38011	319 aa	Known RBP	4.85	□□□□□ -1.63
MMS21	YEL019C	YBR139W	P38109	508 aa		4.85	□□□□□ -1.63
MMS21	YEL019C	ZTA1	P38230	334 aa	Known RBP	4.85	□□□□□ -1.63
MMS21	YEL019C	YPI1	P43587	155 aa		4.85	□□□□□ -1.63
MMS21	YEL019C	TOF1	P53840	1238 aa		4.85	□□□□□ -1.63
MMS21	YEL019C	OAZ1	Q02803	292 aa		4.85	□□□□□ -1.63
MMS21	YEL019C	TSR1	Q07381	788 aa	Known RBP	4.85	□□□□□ -1.63
MMS21	YEL019C	UAF30	Q08747	228 aa		4.85	□□□□□ -1.63
MMS21	YEL019C	HHF1	P02309	103 aa	Known RBP	4.84	□□□□□ -1.63
MMS21	YEL019C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
MMS21	YEL019C	YBR137W	P38276	179 aa		4.84	□□□□□ -1.63
MMS21	YEL019C	PCF11	P39081	626 aa	Predicted RBP	4.84	□□□□□ -1.63
MMS21	YEL019C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
MMS21	YEL019C	TOM22	P49334	152 aa		4.84	□□□□□ -1.63
MMS21	YEL019C	ELP3	Q02908	557 aa	Known RBP	4.84	□□□□□ -1.63
MMS21	YEL019C	SPT15	P13393	240 aa	Known RBP	4.83	□□□□□ -1.64
MMS21	YEL019C	NAM9	P27929	486 aa		4.83	□□□□□ -1.64
MMS21	YEL019C	RIM1	P32445	135 aa	Known RBP	4.83	□□□□□ -1.64
MMS21	YEL019C	SWH1	P35845	1188 aa		4.83	□□□□□ -1.64
MMS21	YEL019C	HEL1	P36113	551 aa		4.83	□□□□□ -1.64
MMS21	YEL019C	AZR1	P50080	613 aa		4.83	□□□□□ -1.64
MMS21	YEL019C	ERV2	Q12284	196 aa		4.83	□□□□□ -1.64
MMS21	YEL019C	MNE1	P24720	663 aa		4.82	□□□□□ -1.64
MMS21	YEL019C	PEX5	P35056	612 aa		4.82	□□□□□ -1.64
MMS21	YEL019C	RFS1	P38234	210 aa	Known RBP	4.82	□□□□□ -1.64
MMS21	YEL019C	PRM5	P40476	318 aa		4.82	□□□□□ -1.64
MMS21	YEL019C	PIB2	P53191	635 aa		4.82	□□□□□ -1.64
MMS21	YEL019C	SNT309	Q06091	175 aa	Predicted RBP	4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms