RNA–Protein interactions for RNA: YDR510W

SMT3, Transcript of Ubiquitin-like protein of the SUMO family, yeast

Gene SMT3, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMT3	YDR510W	YOL107W	Q12239	342 aa		3.11	□□□□□ -1.91
SMT3	YDR510W	DCP1	Q12517	231 aa	Predicted RBP	3.11	□□□□□ -1.91
SMT3	YDR510W	MES1	P00958	751 aa	Known RBP	3.1	□□□□□ -1.91
SMT3	YDR510W	MER1	P16523	270 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	SAR1	P20606	190 aa	Known RBP	3.1	□□□□□ -1.91
SMT3	YDR510W	VPS3	P23643	1011 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	YPS1	P32329	569 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	MSS51	P32335	436 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	DOA4	P32571	926 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	RGT1	P32862	1170 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
SMT3	YDR510W	CBP4	P37267	147 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	YHR122W	P38829	231 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	RTT107	P38850	1070 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	PET100	P38958	111 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	YMR124W	P39523	943 aa	Known RBP	3.1	□□□□□ -1.91
SMT3	YDR510W	PRP39	P39682	629 aa	Known RBP	3.1	□□□□□ -1.91
SMT3	YDR510W	INA22	P40576	216 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	SPG5	P42933	373 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	SMM1	P53720	384 aa	Known RBP	3.1	□□□□□ -1.91
SMT3	YDR510W	ASI1	P54074	624 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	SHR3	Q02774	210 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	HSP31	Q04432	237 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	APC4	Q04601	652 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	PDR8	Q06149	701 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	BCP1	Q06338	283 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	ARR1	Q06596	294 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	MRPL35	Q06678	367 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	YOL073C	Q08232	322 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	AAD15	Q08361	143 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	BUG1	Q12191	341 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	LSP1	Q12230	341 aa	Known RBP	3.1	□□□□□ -1.91
SMT3	YDR510W	FMP16	Q12497	93 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	RMD5	Q12508	421 aa		3.1	□□□□□ -1.91
SMT3	YDR510W	CAR2	P07991	424 aa	Known RBP	3.09	□□□□□ -1.91
SMT3	YDR510W	CHS1	P08004	1131 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	HEM1	P09950	548 aa	Predicted RBP	3.09	□□□□□ -1.91
SMT3	YDR510W	PEP5	P12868	1029 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	MSS116	P15424	664 aa	Known RBP	3.09	□□□□□ -1.91
SMT3	YDR510W	RPI1	P23250	407 aa	Known RBP	3.09	□□□□□ -1.91
SMT3	YDR510W	YUR1	P26725	428 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	FUN19	P28003	413 aa	Predicted RBP	3.09	□□□□□ -1.91
SMT3	YDR510W	CYS4	P32582	507 aa	Known RBP	3.09	□□□□□ -1.91
SMT3	YDR510W	SPR1	P32603	445 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	RAD24	P32641	659 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	FRE1	P32791	686 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	BUD2	P33314	1104 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
SMT3	YDR510W	SPT10	P35208	640 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	OCT1	P35999	772 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	CAB3	P36076	571 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	ROT2	P38138	954 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	RCY1	P39531	840 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	EXO1	P39875	702 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	AIM10	P39965	576 aa	Known RBP	3.09	□□□□□ -1.91
SMT3	YDR510W	ALD5	P40047	520 aa	Known RBP	3.09	□□□□□ -1.91
SMT3	YDR510W	YIL060W	P40519	144 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	SNL1	P40548	159 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	TOS3	P43637	560 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	BNA3	P47039	444 aa	Known RBP	3.09	□□□□□ -1.91
SMT3	YDR510W	YJR154W	P47181	346 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	RAD17	P48581	401 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	MNT4	P53745	580 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	YNL134C	P53912	376 aa	Known RBP	3.09	□□□□□ -1.91
SMT3	YDR510W	GIP3	Q03016	1276 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	RRN11	Q04712	507 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	MCH4	Q08268	501 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	GEP3	Q08622	556 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	RNH203	Q12338	110 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	MED4	Q12343	284 aa		3.09	□□□□□ -1.91
SMT3	YDR510W	SUC2	P00724	532 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	YPT1	P01123	206 aa	Known RBP	3.08	□□□□□ -1.92
SMT3	YDR510W	BI2	P03873	423 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	PRB1	P09232	635 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	IMA3	P0CW40	589 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	IMA4	P0CW41	589 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	BAR1	P12630	587 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	MAK32	P23060	363 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	RAD57	P25301	460 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	HCM1	P25364	564 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	ADY2	P25613	283 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	MSK1	P32048	576 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	SMY1	P32364	656 aa	Known RBP	3.08	□□□□□ -1.92
SMT3	YDR510W	RAD23	P32628	398 aa	Known RBP	3.08	□□□□□ -1.92
SMT3	YDR510W	RTC2	P38279	296 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	TAE1	P38340	232 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	LAG1	P38703	411 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	TCD1	P38756	429 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	YER079W	P40052	210 aa	Known RBP	3.08	□□□□□ -1.92
SMT3	YDR510W	CDC40	P40968	455 aa	Predicted RBP	3.08	□□□□□ -1.92
SMT3	YDR510W	TRS85	P46944	698 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	LOH1	P47055	219 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	YDL186W	P48568	277 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	UBP8	P50102	471 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	ORC5	P50874	479 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	PMT5	P52867	743 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	YIF1	P53845	314 aa	Known RBP	3.08	□□□□□ -1.92
SMT3	YDR510W	DSL1	P53847	754 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	PET117	Q02771	107 aa		3.08	□□□□□ -1.92
SMT3	YDR510W	TAF12	Q03761	539 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms