RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C CDC24P11433 854 aaPredicted RBP0.58□□□□□ -2.32
SPG3YDR504C RAD57P25301 460 aa0.58□□□□□ -2.32
SPG3YDR504C MUM2P38236 366 aa0.58□□□□□ -2.32
SPG3YDR504C YIR035CP40579 254 aa0.58□□□□□ -2.32
SPG3YDR504C KTR5P53966 522 aaPredicted RBP0.58□□□□□ -2.32
SPG3YDR504C YSA1Q01976 231 aa0.58□□□□□ -2.32
SPG3YDR504C YDR387CQ04162 555 aa0.58□□□□□ -2.32
SPG3YDR504C CMS1Q07897 291 aaKnown RBP0.58□□□□□ -2.32
SPG3YDR504C RLM1Q12224 676 aa0.58□□□□□ -2.32
SPG3YDR504C ATP4P05626 244 aa0.57□□□□□ -2.32
SPG3YDR504C RPS19AP07280 144 aaKnown RBP0.57□□□□□ -2.32
SPG3YDR504C RPS19BP07281 144 aaPredicted RBP0.57□□□□□ -2.32
SPG3YDR504C SKN1P33336 771 aa0.57□□□□□ -2.32
SPG3YDR504C IGD1P43598 195 aa0.57□□□□□ -2.32
SPG3YDR504C ZRC1P20107 442 aa0.56□□□□□ -2.32
SPG3YDR504C SLC1P33333 303 aa0.56□□□□□ -2.32
SPG3YDR504C THI2P38141 450 aa0.56□□□□□ -2.32
SPG3YDR504C SBE22P38814 852 aa0.56□□□□□ -2.32
SPG3YDR504C FHL1P39521 936 aa0.56□□□□□ -2.32
SPG3YDR504C PTI1P39927 425 aaPredicted RBP0.56□□□□□ -2.32
SPG3YDR504C SCC4P40090 624 aa0.56□□□□□ -2.32
SPG3YDR504C YIL029CP40538 142 aa0.56□□□□□ -2.32
SPG3YDR504C YJR030CP47101 745 aa0.56□□□□□ -2.32
SPG3YDR504C ECM27P47144 725 aa0.56□□□□□ -2.32
SPG3YDR504C NCS2P53923 493 aaPredicted RBP0.56□□□□□ -2.32
SPG3YDR504C ATP10P18496 279 aa0.55□□□□□ -2.32
SPG3YDR504C DBF20P32328 564 aa0.55□□□□□ -2.32
SPG3YDR504C AST1P35183 429 aa0.55□□□□□ -2.32
SPG3YDR504C TCD2P36101 447 aaKnown RBP0.55□□□□□ -2.32
SPG3YDR504C LYS1P38998 373 aaRIP-Chip data0.55□□□□□ -2.32 RIP-Chip
SPG3YDR504C MST27P53176 234 aa0.55□□□□□ -2.32
SPG3YDR504C HST4P53688 370 aa0.55□□□□□ -2.32
SPG3YDR504C DSL1P53847 754 aa0.55□□□□□ -2.32
SPG3YDR504C RPL21AQ02753 160 aaKnown RBP0.55□□□□□ -2.32
SPG3YDR504C NYV1Q12255 253 aa0.55□□□□□ -2.32
SPG3YDR504C RPL21BQ12672 160 aaKnown RBP0.55□□□□□ -2.32
SPG3YDR504C PSY4P38193 441 aa0.54□□□□□ -2.32
SPG3YDR504C VID30P53076 958 aa0.54□□□□□ -2.32
SPG3YDR504C RTN1Q04947 295 aaKnown RBP0.54□□□□□ -2.32
SPG3YDR504C BCH1Q05029 724 aa0.54□□□□□ -2.32
SPG3YDR504C YGK3Q12222 375 aaPredicted RBP0.54□□□□□ -2.32
SPG3YDR504C ORT1Q12375 292 aa0.54□□□□□ -2.32
SPG3YDR504C PPQ1P32945 549 aa0.53□□□□□ -2.32
SPG3YDR504C ANR2P36090 516 aaPredicted RBP0.53□□□□□ -2.32
SPG3YDR504C ATG12P38316 186 aa0.53□□□□□ -2.32
SPG3YDR504C PFS1P38872 237 aa0.53□□□□□ -2.32
SPG3YDR504C CCT2P39076 527 aaKnown RBP0.53□□□□□ -2.32
SPG3YDR504C NAG1Q8TGN9 163 aa0.53□□□□□ -2.32
SPG3YDR504C YPT6Q99260 215 aa0.53□□□□□ -2.32
SPG3YDR504C SSM4P40318 1319 aa0.53□□□□□ -2.32
SPG3YDR504C RPL31BP0C2H9 113 aaKnown RBP0.52□□□□□ -2.33
SPG3YDR504C PRD1P25375 712 aa0.52□□□□□ -2.33
SPG3YDR504C SGN1P40561 250 aaKnown RBP RIP-Chip data0.52□□□□□ -2.33not detected
SPG3YDR504C PET130P47065 347 aa0.52□□□□□ -2.33
SPG3YDR504C YGL108CP53139 140 aa0.52□□□□□ -2.33
SPG3YDR504C MFG1Q07684 458 aa0.52□□□□□ -2.33
SPG3YDR504C SKM1Q12469 655 aa0.52□□□□□ -2.33
SPG3YDR504C RMD5Q12508 421 aa0.52□□□□□ -2.33
SPG3YDR504C SRB2P34162 210 aa0.51□□□□□ -2.33
SPG3YDR504C MRM2P53123 320 aa0.51□□□□□ -2.33
SPG3YDR504C GTR1Q00582 310 aa0.51□□□□□ -2.33
SPG3YDR504C BET5Q03630 159 aa0.51□□□□□ -2.33
SPG3YDR504C FAR10Q06001 478 aa0.51□□□□□ -2.33
SPG3YDR504C SGT1Q08446 395 aa0.51□□□□□ -2.33
SPG3YDR504C HIS4P00815 799 aaKnown RBP0.5□□□□□ -2.33
SPG3YDR504C RPL19AP0CX82 189 aaKnown RBP0.5□□□□□ -2.33
SPG3YDR504C RPL19BP0CX83 189 aaPredicted RBP0.5□□□□□ -2.33
SPG3YDR504C COQ5P49017 307 aa0.5□□□□□ -2.33
SPG3YDR504C ZRG17P53735 605 aa0.5□□□□□ -2.33
SPG3YDR504C YIF1P53845 314 aaKnown RBP0.5□□□□□ -2.33
SPG3YDR504C SKI8Q02793 397 aaPredicted RBP0.5□□□□□ -2.33
SPG3YDR504C FIN1Q03898 291 aa0.5□□□□□ -2.33
SPG3YDR504C SYF1Q04048 859 aaPredicted RBP0.5□□□□□ -2.33
SPG3YDR504C IOC4Q04213 475 aa0.5□□□□□ -2.33
SPG3YDR504C HSP31Q04432 237 aa0.5□□□□□ -2.33
SPG3YDR504C YEH1Q07804 573 aa0.5□□□□□ -2.33
SPG3YDR504C YLR278CQ05854 1341 aa0.49□□□□□ -2.33
SPG3YDR504C YBL029WP38201 376 aa0.49□□□□□ -2.33
SPG3YDR504C DPH1P40487 425 aaKnown RBP0.49□□□□□ -2.33
SPG3YDR504C ILV5P06168 395 aaKnown RBP0.48□□□□□ -2.33
SPG3YDR504C SDH4P37298 181 aa0.48□□□□□ -2.33
SPG3YDR504C TFG2P41896 400 aaPredicted RBP0.48□□□□□ -2.33
SPG3YDR504C HMS2P47175 358 aa0.48□□□□□ -2.33
SPG3YDR504C NGL3Q03210 505 aa0.48□□□□□ -2.33
SPG3YDR504C PLB3Q08108 686 aa0.48□□□□□ -2.33
SPG3YDR504C SNU66Q12420 587 aaPredicted RBP0.48□□□□□ -2.33
SPG3YDR504C YDL007C-AQ2V2Q0 85 aa0.48□□□□□ -2.33
SPG3YDR504C FUM1P08417 488 aaKnown RBP0.47□□□□□ -2.33
SPG3YDR504C PHA2P32452 334 aa0.47□□□□□ -2.33
SPG3YDR504C MKK1P32490 508 aa0.47□□□□□ -2.33
SPG3YDR504C PRP21P32524 280 aaPredicted RBP0.47□□□□□ -2.33
SPG3YDR504C GYP6P32806 458 aa0.47□□□□□ -2.33
SPG3YDR504C WBP1P33767 430 aaKnown RBP0.47□□□□□ -2.33
SPG3YDR504C KAP123P40069 1113 aaKnown RBP0.47□□□□□ -2.33
SPG3YDR504C HAC1P41546 238 aa0.47□□□□□ -2.33
SPG3YDR504C SFH5P47008 294 aa0.47□□□□□ -2.33
SPG3YDR504C UBX4P54730 416 aa0.47□□□□□ -2.33
SPG3YDR504C CEX1Q12453 761 aa0.47□□□□□ -2.33
SPG3YDR504C GAL80P04387 435 aa0.46□□□□□ -2.34
SPG3YDR504C PHO84P25297 587 aaKnown RBP0.46□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms