RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C DAL2P25335 343 aa2.53□□□□□ -2
SSN2YDR443C PMI40P29952 429 aaKnown RBP2.53□□□□□ -2
SSN2YDR443C LIP5P32875 414 aa2.53□□□□□ -2
SSN2YDR443C IML3P38265 245 aa2.53□□□□□ -2
SSN2YDR443C ARO9P38840 513 aaPredicted RBP2.53□□□□□ -2
SSN2YDR443C FUN12P39730 1002 aaKnown RBP2.53□□□□□ -2
SSN2YDR443C HXT9P40885 567 aa2.53□□□□□ -2
SSN2YDR443C SNZ3P43545 298 aa2.53□□□□□ -2
SSN2YDR443C SWP82P43554 623 aa2.53□□□□□ -2
SSN2YDR443C CTH1P47976 325 aa2.53□□□□□ -2
SSN2YDR443C SNZ2P53824 298 aa2.53□□□□□ -2
SSN2YDR443C HXT11P54862 567 aa2.53□□□□□ -2
SSN2YDR443C REC102Q02721 264 aa2.53□□□□□ -2
SSN2YDR443C PEX27Q08580 376 aa2.53□□□□□ -2
SSN2YDR443C MSL5Q12186 476 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
SSN2YDR443C LSP1Q12230 341 aaKnown RBP2.53□□□□□ -2
SSN2YDR443C PRS5Q12265 496 aaKnown RBP2.53□□□□□ -2
SSN2YDR443C POM34Q12445 299 aa2.53□□□□□ -2
SSN2YDR443C SRN2Q99176 213 aa2.53□□□□□ -2
SSN2YDR443C ARG4P04076 463 aaPredicted RBP2.53□□□□□ -2
SSN2YDR443C GPH1P06738 902 aaKnown RBP2.53□□□□□ -2
SSN2YDR443C PUT2P07275 575 aa2.53□□□□□ -2
SSN2YDR443C AIM26P32858 118 aa2.53□□□□□ -2
SSN2YDR443C YBR144CP34215 104 aa2.53□□□□□ -2
SSN2YDR443C RTC2P38279 296 aa2.53□□□□□ -2
SSN2YDR443C RTC3P38804 111 aaPredicted RBP2.53□□□□□ -2
SSN2YDR443C GPI16P38875 610 aa2.53□□□□□ -2
SSN2YDR443C PRP39P39682 629 aaKnown RBP2.53□□□□□ -2
SSN2YDR443C RFC4P40339 323 aaKnown RBP2.53□□□□□ -2
SSN2YDR443C ATM1P40416 690 aa2.53□□□□□ -2
SSN2YDR443C RPN11P43588 306 aaKnown RBP2.53□□□□□ -2
SSN2YDR443C HAM1P47119 197 aaKnown RBP2.53□□□□□ -2
SSN2YDR443C YPT11P48559 417 aa2.53□□□□□ -2
SSN2YDR443C SLX9P53251 210 aaPredicted RBP2.53□□□□□ -2
SSN2YDR443C YNL181WP53878 407 aa2.53□□□□□ -2
SSN2YDR443C YAT1P80235 687 aa2.53□□□□□ -2
SSN2YDR443C YMR265CQ03508 461 aaKnown RBP2.53□□□□□ -2
SSN2YDR443C COQ9Q05779 260 aa2.53□□□□□ -2
SSN2YDR443C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.53□□□□□ -2 RIP-Chip
SSN2YDR443C PKH2Q12236 1081 aaKnown RBP2.53□□□□□ -2
SSN2YDR443C CDC33P07260 213 aaKnown RBP2.53□□□□□ -2.01
SSN2YDR443C CHS1P08004 1131 aa2.53□□□□□ -2.01
SSN2YDR443C SAR1P20606 190 aaKnown RBP2.53□□□□□ -2.01
SSN2YDR443C GPI12P23797 304 aa2.53□□□□□ -2.01
SSN2YDR443C IMG1P25626 169 aa2.53□□□□□ -2.01
SSN2YDR443C PTC6P25646 442 aa2.53□□□□□ -2.01
SSN2YDR443C CIN8P27895 1000 aa2.53□□□□□ -2.01
SSN2YDR443C FRE1P32791 686 aa2.53□□□□□ -2.01
SSN2YDR443C SNL1P40548 159 aa2.53□□□□□ -2.01
SSN2YDR443C NNT1Q05874 261 aa2.53□□□□□ -2.01
SSN2YDR443C RGC1Q06108 1083 aaKnown RBP2.53□□□□□ -2.01
SSN2YDR443C UTP10P42945 1769 aaKnown RBP2.53□□□□□ -2.01
SSN2YDR443C COX1P00401 534 aa2.52□□□□□ -2.01
SSN2YDR443C AAC1P04710 309 aa2.52□□□□□ -2.01
SSN2YDR443C RPL31BP0C2H9 113 aaKnown RBP2.52□□□□□ -2.01
SSN2YDR443C RPS4AP0CX35 261 aaKnown RBP2.52□□□□□ -2.01
SSN2YDR443C RPS4BP0CX36 261 aaKnown RBP2.52□□□□□ -2.01
SSN2YDR443C PEP5P12868 1029 aa2.52□□□□□ -2.01
SSN2YDR443C ART10P18634 518 aaKnown RBP2.52□□□□□ -2.01
SSN2YDR443C PRP4P20053 465 aaKnown RBP2.52□□□□□ -2.01
SSN2YDR443C CKI1P20485 582 aa2.52□□□□□ -2.01
SSN2YDR443C DPB2P24482 689 aaPredicted RBP2.52□□□□□ -2.01
SSN2YDR443C ASC1P38011 319 aaKnown RBP2.52□□□□□ -2.01
SSN2YDR443C CHK1P38147 527 aa2.52□□□□□ -2.01
SSN2YDR443C PCA1P38360 1216 aa2.52□□□□□ -2.01
SSN2YDR443C YHL012WP38709 493 aa2.52□□□□□ -2.01
SSN2YDR443C BIG1P38813 335 aa2.52□□□□□ -2.01
SSN2YDR443C UBA4P38820 440 aa2.52□□□□□ -2.01
SSN2YDR443C YHR177WP38867 453 aa2.52□□□□□ -2.01
SSN2YDR443C CEM1P39525 442 aa2.52□□□□□ -2.01
SSN2YDR443C AIR1P40507 360 aaKnown RBP2.52□□□□□ -2.01
SSN2YDR443C PTR3P43606 678 aa2.52□□□□□ -2.01
SSN2YDR443C TAX4P47030 604 aa2.52□□□□□ -2.01
SSN2YDR443C ASN2P49090 572 aaKnown RBP2.52□□□□□ -2.01
SSN2YDR443C MFM1Q02783 413 aa2.52□□□□□ -2.01
SSN2YDR443C FIN1Q03898 291 aa2.52□□□□□ -2.01
SSN2YDR443C BUR2Q05949 395 aa2.52□□□□□ -2.01
SSN2YDR443C YLR040CQ07988 224 aa2.52□□□□□ -2.01
SSN2YDR443C YOL159CQ08300 171 aa2.52□□□□□ -2.01
SSN2YDR443C RDR1Q08904 546 aa2.52□□□□□ -2.01
SSN2YDR443C ATG31Q12421 196 aa2.52□□□□□ -2.01
SSN2YDR443C AI5_ALPHAQ9ZZX1 630 aa2.52□□□□□ -2.01
SSN2YDR443C RAD3P06839 778 aa2.52□□□□□ -2.01
SSN2YDR443C ZRC1P20107 442 aa2.52□□□□□ -2.01
SSN2YDR443C VPS34P22543 875 aa2.52□□□□□ -2.01
SSN2YDR443C PBN1P25580 416 aa2.52□□□□□ -2.01
SSN2YDR443C DCG1P32460 244 aa2.52□□□□□ -2.01
SSN2YDR443C SPS19P32573 292 aaKnown RBP2.52□□□□□ -2.01
SSN2YDR443C SKT5P34226 696 aa2.52□□□□□ -2.01
SSN2YDR443C MIC12P38341 106 aa2.52□□□□□ -2.01
SSN2YDR443C GET2P40056 285 aa2.52□□□□□ -2.01
SSN2YDR443C YGL159WP53110 370 aa2.52□□□□□ -2.01
SSN2YDR443C CUS2P53830 285 aaPredicted RBP2.52□□□□□ -2.01
SSN2YDR443C YNL260CP53846 198 aa2.52□□□□□ -2.01
SSN2YDR443C NAM8Q00539 523 aaKnown RBP2.52□□□□□ -2.01
SSN2YDR443C SRL4Q03085 281 aa2.52□□□□□ -2.01
SSN2YDR443C ARP10Q04549 284 aa2.52□□□□□ -2.01
SSN2YDR443C APC4Q04601 652 aa2.52□□□□□ -2.01
SSN2YDR443C CDA1Q06702 301 aa2.52□□□□□ -2.01
SSN2YDR443C YPR1Q12458 312 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms