RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C ARG3P05150 338 aa2.41□□□□□ -2.02
SNU56YDR240C MRPL10P36520 322 aa2.41□□□□□ -2.02
SNU56YDR240C SAS2P40963 338 aa2.41□□□□□ -2.02
SNU56YDR240C YJR011CP47086 261 aaPredicted RBP2.41□□□□□ -2.02
SNU56YDR240C YIF1P53845 314 aaKnown RBP2.41□□□□□ -2.02
SNU56YDR240C APJ1P53940 528 aa2.41□□□□□ -2.02
SNU56YDR240C VTA1Q06263 330 aa2.41□□□□□ -2.02
SNU56YDR240C PLP2Q12017 286 aa2.41□□□□□ -2.02
SNU56YDR240C ORT1Q12375 292 aa2.41□□□□□ -2.02
SNU56YDR240C GRX6Q12438 231 aa2.41□□□□□ -2.02
SNU56YDR240C CLC1P17891 233 aa2.4□□□□□ -2.02
SNU56YDR240C RFC3P38629 340 aa2.4□□□□□ -2.02
SNU56YDR240C HMS2P47175 358 aa2.4□□□□□ -2.02
SNU56YDR240C FMS1P50264 508 aa2.4□□□□□ -2.02
SNU56YDR240C TIM10P87108 93 aa2.4□□□□□ -2.02
SNU56YDR240C BET5Q03630 159 aa2.4□□□□□ -2.02
SNU56YDR240C HSP42Q12329 375 aa2.4□□□□□ -2.02
SNU56YDR240C SNU66Q12420 587 aaPredicted RBP2.4□□□□□ -2.02
SNU56YDR240C MRP7P12687 371 aa2.39□□□□□ -2.03
SNU56YDR240C CTR86P25355 563 aa2.39□□□□□ -2.03
SNU56YDR240C SIN4P32259 974 aa2.39□□□□□ -2.03
SNU56YDR240C HXT3P32466 567 aaKnown RBP2.39□□□□□ -2.03
SNU56YDR240C NPL6P32832 435 aa2.39□□□□□ -2.03
SNU56YDR240C SMF1P38925 575 aa2.39□□□□□ -2.03
SNU56YDR240C AIM10P39965 576 aaKnown RBP2.39□□□□□ -2.03
SNU56YDR240C SSU1P41930 458 aa2.39□□□□□ -2.03
SNU56YDR240C MDE1P47095 244 aa2.39□□□□□ -2.03
SNU56YDR240C RHO5P53879 331 aaKnown RBP2.39□□□□□ -2.03
SNU56YDR240C KRE2P27809 442 aa2.39□□□□□ -2.03
SNU56YDR240C ARA1P38115 344 aa2.39□□□□□ -2.03
SNU56YDR240C JLP2P40206 208 aa2.39□□□□□ -2.03
SNU56YDR240C YJR085CP47131 105 aaKnown RBP2.39□□□□□ -2.03
SNU56YDR240C AZR1P50080 613 aa2.39□□□□□ -2.03
SNU56YDR240C MTQ1P53944 314 aa2.39□□□□□ -2.03
SNU56YDR240C TAF12Q03761 539 aa2.39□□□□□ -2.03
SNU56YDR240C MED1Q12321 566 aa2.39□□□□□ -2.03
SNU56YDR240C RRI2Q12348 645 aa2.39□□□□□ -2.03
SNU56YDR240C JID1Q12350 301 aa2.39□□□□□ -2.03
SNU56YDR240C SPO7P18410 259 aa2.38□□□□□ -2.03
SNU56YDR240C PPH22P23595 377 aa2.38□□□□□ -2.03
SNU56YDR240C DFG10P40526 253 aa2.38□□□□□ -2.03
SNU56YDR240C IRC6P43615 237 aa2.38□□□□□ -2.03
SNU56YDR240C SFH5P47008 294 aa2.38□□□□□ -2.03
SNU56YDR240C MNP1P53163 194 aaPredicted RBP2.38□□□□□ -2.03
SNU56YDR240C BCH1Q05029 724 aa2.38□□□□□ -2.03
SNU56YDR240C NDE2Q07500 545 aa2.38□□□□□ -2.03
SNU56YDR240C YBL111CQ3E7Y5 667 aa2.38□□□□□ -2.03
SNU56YDR240C CSE2P33308 149 aa2.37□□□□□ -2.03
SNU56YDR240C DLD2P46681 530 aaKnown RBP2.37□□□□□ -2.03
SNU56YDR240C GPI15P53961 229 aa2.37□□□□□ -2.03
SNU56YDR240C RNY1Q02933 434 aaKnown RBP2.37□□□□□ -2.03
SNU56YDR240C RKM1Q08961 583 aaPredicted RBP2.37□□□□□ -2.03
SNU56YDR240C YRM1Q12340 786 aa2.37□□□□□ -2.03
SNU56YDR240C ILV5P06168 395 aaKnown RBP2.36□□□□□ -2.03
SNU56YDR240C RPL3P14126 387 aaKnown RBP2.36□□□□□ -2.03
SNU56YDR240C ROX1P25042 368 aa2.36□□□□□ -2.03
SNU56YDR240C PRR1P28708 518 aa2.36□□□□□ -2.03
SNU56YDR240C SMY1P32364 656 aaKnown RBP2.36□□□□□ -2.03
SNU56YDR240C YAL037WP39728 267 aa2.36□□□□□ -2.03
SNU56YDR240C RRP45Q05636 305 aaKnown RBP2.36□□□□□ -2.03
SNU56YDR240C IZH2Q12442 317 aa2.36□□□□□ -2.03
SNU56YDR240C NAM2P11325 894 aa2.35□□□□□ -2.03
SNU56YDR240C CKA1P15790 372 aa2.35□□□□□ -2.03
SNU56YDR240C RPB5P20434 215 aa2.35□□□□□ -2.03
SNU56YDR240C CLN1P20437 546 aa2.35□□□□□ -2.03
SNU56YDR240C RAD57P25301 460 aa2.35□□□□□ -2.03
SNU56YDR240C RRP1P35178 278 aaPredicted RBP2.35□□□□□ -2.03
SNU56YDR240C APE3P37302 537 aaKnown RBP2.35□□□□□ -2.03
SNU56YDR240C YHR131CP38835 850 aa2.35□□□□□ -2.03
SNU56YDR240C RPS0BP46654 252 aaKnown RBP2.35□□□□□ -2.03
SNU56YDR240C RPA49Q01080 415 aaPredicted RBP2.35□□□□□ -2.03
SNU56YDR240C VHS1Q03785 461 aa2.35□□□□□ -2.03
SNU56YDR240C MDM30Q05930 598 aa2.35□□□□□ -2.03
SNU56YDR240C SIL1Q08199 421 aa2.35□□□□□ -2.03
SNU56YDR240C SRL2Q12020 392 aa2.35□□□□□ -2.03
SNU56YDR240C SCEIP03882 235 aa2.34□□□□□ -2.03
SNU56YDR240C SPO12P17123 173 aa2.34□□□□□ -2.03
SNU56YDR240C RHB1P25378 209 aa2.34□□□□□ -2.03
SNU56YDR240C GEX1P25596 615 aa2.34□□□□□ -2.03
SNU56YDR240C SPT10P35208 640 aa2.34□□□□□ -2.03
SNU56YDR240C NTC20P38302 140 aaPredicted RBP2.34□□□□□ -2.03
SNU56YDR240C MIG3P39943 394 aa2.34□□□□□ -2.03
SNU56YDR240C COS5P47187 383 aa2.34□□□□□ -2.03
SNU56YDR240C ADA2Q02336 434 aa2.34□□□□□ -2.03
SNU56YDR240C YDL121CQ07541 149 aa2.34□□□□□ -2.03
SNU56YDR240C COS7Q07788 383 aa2.34□□□□□ -2.03
SNU56YDR240C CMS1Q07897 291 aaKnown RBP2.34□□□□□ -2.03
SNU56YDR240C VAM3Q12241 283 aa2.34□□□□□ -2.03
SNU56YDR240C TPT1Q12272 230 aaKnown RBP2.34□□□□□ -2.03
SNU56YDR240C AAT2P23542 418 aaKnown RBP2.33□□□□□ -2.04
SNU56YDR240C BEM1P29366 551 aa2.33□□□□□ -2.04
SNU56YDR240C HIR2P32480 875 aa2.33□□□□□ -2.04
SNU56YDR240C RML2P32611 393 aa2.33□□□□□ -2.04
SNU56YDR240C RTC2P38279 296 aa2.33□□□□□ -2.04
SNU56YDR240C YIL029CP40538 142 aa2.33□□□□□ -2.04
SNU56YDR240C RAX1Q08760 435 aa2.33□□□□□ -2.04
SNU56YDR240C MET17P06106 444 aa2.33□□□□□ -2.04
SNU56YDR240C MSI1P13712 422 aa2.33□□□□□ -2.04
SNU56YDR240C CLB3P24870 427 aa2.33□□□□□ -2.04
SNU56YDR240C SOR1P35497 357 aaKnown RBP2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms