RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C SML1Q04964 104 aa1.71□□□□□ -2.13
MSH6YDR097C NSE1Q07913 336 aa1.71□□□□□ -2.13
MSH6YDR097C ACF2Q12168 779 aa1.71□□□□□ -2.13
MSH6YDR097C AIM45Q12480 344 aaKnown RBP1.71□□□□□ -2.13
MSH6YDR097C BRR1Q99177 341 aaPredicted RBP1.71□□□□□ -2.13
MSH6YDR097C ICL1P28240 557 aaPredicted RBP1.71□□□□□ -2.14
MSH6YDR097C PEX2P32800 271 aa1.71□□□□□ -2.14
MSH6YDR097C RPT5P33297 434 aaKnown RBP1.71□□□□□ -2.14
MSH6YDR097C ROT2P38138 954 aa1.71□□□□□ -2.14
MSH6YDR097C TCM62P38228 572 aaKnown RBP1.71□□□□□ -2.14
MSH6YDR097C YDR089WP38966 869 aa1.71□□□□□ -2.14
MSH6YDR097C UBP5P39944 805 aa1.71□□□□□ -2.14
MSH6YDR097C YEL020CP39994 560 aa1.71□□□□□ -2.14
MSH6YDR097C TFG2P41896 400 aaPredicted RBP1.71□□□□□ -2.14
MSH6YDR097C YFR018CP43599 363 aa1.71□□□□□ -2.14
MSH6YDR097C ROG1P53118 685 aa1.71□□□□□ -2.14
MSH6YDR097C RPL15BP54780 204 aaPredicted RBP1.71□□□□□ -2.14
MSH6YDR097C TOF2Q02208 771 aa1.71□□□□□ -2.14
MSH6YDR097C NUP100Q02629 959 aa1.71□□□□□ -2.14
MSH6YDR097C DBP9Q06218 594 aaKnown RBP1.71□□□□□ -2.14
MSH6YDR097C YFH1Q07540 174 aa1.71□□□□□ -2.14
MSH6YDR097C GSH2Q08220 491 aa1.71□□□□□ -2.14
MSH6YDR097C THI20Q08224 551 aa1.71□□□□□ -2.14
MSH6YDR097C BUG1Q12191 341 aa1.71□□□□□ -2.14
MSH6YDR097C YOR012WQ12351 137 aa1.71□□□□□ -2.14
MSH6YDR097C RNA1P11745 407 aaKnown RBP1.71□□□□□ -2.14
MSH6YDR097C SPO7P18410 259 aa1.71□□□□□ -2.14
MSH6YDR097C HCM1P25364 564 aa1.71□□□□□ -2.14
MSH6YDR097C RIM1P32445 135 aaKnown RBP1.71□□□□□ -2.14
MSH6YDR097C ATP11P32453 318 aa1.71□□□□□ -2.14
MSH6YDR097C RRP1P35178 278 aaPredicted RBP1.71□□□□□ -2.14
MSH6YDR097C OLA1P38219 394 aaKnown RBP1.71□□□□□ -2.14
MSH6YDR097C YER130CP39959 443 aa1.71□□□□□ -2.14
MSH6YDR097C FAU1P40099 211 aa1.71□□□□□ -2.14
MSH6YDR097C ALK1P43633 760 aaKnown RBP1.71□□□□□ -2.14
MSH6YDR097C TRS85P46944 698 aa1.71□□□□□ -2.14
MSH6YDR097C COG2P53271 262 aa1.71□□□□□ -2.14
MSH6YDR097C YGR127WP53275 312 aa1.71□□□□□ -2.14
MSH6YDR097C AQR1P53943 586 aa1.71□□□□□ -2.14
MSH6YDR097C VPS60Q03390 229 aa1.71□□□□□ -2.14
MSH6YDR097C FRE3Q08905 711 aa1.71□□□□□ -2.14
MSH6YDR097C APL4Q12028 832 aa1.71□□□□□ -2.14
MSH6YDR097C YOL107WQ12239 342 aa1.71□□□□□ -2.14
MSH6YDR097C YRM1Q12340 786 aa1.71□□□□□ -2.14
MSH6YDR097C RPL12AP0CX53 165 aaKnown RBP1.7□□□□□ -2.14
MSH6YDR097C RPL12BP0CX54 165 aa1.7□□□□□ -2.14
MSH6YDR097C FRS2P15625 503 aaKnown RBP1.7□□□□□ -2.14
MSH6YDR097C CDC23P16522 626 aa1.7□□□□□ -2.14
MSH6YDR097C TKL1P23254 680 aaKnown RBP1.7□□□□□ -2.14
MSH6YDR097C DAL80P26343 269 aa1.7□□□□□ -2.14
MSH6YDR097C YIM1P28625 365 aa1.7□□□□□ -2.14
MSH6YDR097C DEP1P31385 405 aa1.7□□□□□ -2.14
MSH6YDR097C SSE1P32589 693 aaKnown RBP1.7□□□□□ -2.14
MSH6YDR097C DRE2P36152 348 aa1.7□□□□□ -2.14
MSH6YDR097C MRPL10P36520 322 aa1.7□□□□□ -2.14
MSH6YDR097C ARA1P38115 344 aa1.7□□□□□ -2.14
MSH6YDR097C PEX32P38292 413 aa1.7□□□□□ -2.14
MSH6YDR097C GDT1P38301 280 aaPredicted RBP1.7□□□□□ -2.14
MSH6YDR097C MSR1P38714 643 aa1.7□□□□□ -2.14
MSH6YDR097C TCD1P38756 429 aa1.7□□□□□ -2.14
MSH6YDR097C YHR218WP38899 603 aa1.7□□□□□ -2.14
MSH6YDR097C MBB1P39534 108 aa1.7□□□□□ -2.14
MSH6YDR097C GAT2P40209 560 aa1.7□□□□□ -2.14
MSH6YDR097C DSN1P40568 576 aa1.7□□□□□ -2.14
MSH6YDR097C HYR1P40581 163 aaKnown RBP1.7□□□□□ -2.14
MSH6YDR097C YIF1P53845 314 aaKnown RBP1.7□□□□□ -2.14
MSH6YDR097C SWF1Q04629 336 aa1.7□□□□□ -2.14
MSH6YDR097C STE23Q06010 1027 aa1.7□□□□□ -2.14
MSH6YDR097C AIM39Q08223 395 aa1.7□□□□□ -2.14
MSH6YDR097C SLK19Q08581 821 aaKnown RBP1.7□□□□□ -2.14
MSH6YDR097C YKL068W-AQ3E826 78 aa1.7□□□□□ -2.14
MSH6YDR097C RAD50P12753 1312 aa1.7□□□□□ -2.14
MSH6YDR097C RPN13O13563 156 aa1.7□□□□□ -2.14
MSH6YDR097C MRS3P10566 314 aa1.7□□□□□ -2.14
MSH6YDR097C UBA1P22515 1024 aaKnown RBP1.7□□□□□ -2.14
MSH6YDR097C AIM17P23180 465 aaKnown RBP1.7□□□□□ -2.14
MSH6YDR097C YCP4P25349 247 aaKnown RBP1.7□□□□□ -2.14
MSH6YDR097C YMC1P32331 307 aa1.7□□□□□ -2.14
MSH6YDR097C ECM25P32525 599 aa1.7□□□□□ -2.14
MSH6YDR097C NTC20P38302 140 aaPredicted RBP1.7□□□□□ -2.14
MSH6YDR097C RIX1P38883 763 aaPredicted RBP1.7□□□□□ -2.14
MSH6YDR097C SYG1P40528 902 aa1.7□□□□□ -2.14
MSH6YDR097C UBP8P50102 471 aa1.7□□□□□ -2.14
MSH6YDR097C WAR1Q03631 944 aa1.7□□□□□ -2.14
MSH6YDR097C SNU56Q03782 492 aaKnown RBP1.7□□□□□ -2.14
MSH6YDR097C NUP53Q03790 475 aa1.7□□□□□ -2.14
MSH6YDR097C TMN2Q04562 672 aa1.7□□□□□ -2.14
MSH6YDR097C RTT103Q05543 409 aa1.7□□□□□ -2.14
MSH6YDR097C NBL1Q3E7Y6 73 aa1.7□□□□□ -2.14
MSH6YDR097C YDR034W-BQ6Q5X2 51 aa1.7□□□□□ -2.14
MSH6YDR097C RAD52P06778 471 aaKnown RBP1.7□□□□□ -2.14
MSH6YDR097C RPL31BP0C2H9 113 aaKnown RBP1.7□□□□□ -2.14
MSH6YDR097C YMR085WP0CF18 432 aa1.7□□□□□ -2.14
MSH6YDR097C MCM4P30665 933 aaKnown RBP1.7□□□□□ -2.14
MSH6YDR097C FLO10P36170 1169 aa1.7□□□□□ -2.14
MSH6YDR097C RET3P53600 189 aa1.7□□□□□ -2.14
MSH6YDR097C YNL143CP53908 130 aa1.7□□□□□ -2.14
MSH6YDR097C KTR5P53966 522 aaPredicted RBP1.7□□□□□ -2.14
MSH6YDR097C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
MSH6YDR097C YMR130WQ04223 302 aa1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms