RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	BEM1	P29366	551 aa		5.42	□□□□□ -1.54
SIR2	YDL042C	SPC110	P32380	944 aa		5.42	□□□□□ -1.54
SIR2	YDL042C	CIK1	Q01649	594 aa		5.42	□□□□□ -1.54
SIR2	YDL042C	ACL4	Q03771	387 aa		5.42	□□□□□ -1.54
SIR2	YDL042C	CYB2	P00175	591 aa		5.41	□□□□□ -1.54
SIR2	YDL042C	RPL15A	P05748	204 aa	Known RBP	5.41	□□□□□ -1.54
SIR2	YDL042C	RHB1	P25378	209 aa		5.41	□□□□□ -1.54
SIR2	YDL042C	ATS1	P31386	333 aa		5.41	□□□□□ -1.54
SIR2	YDL042C	SLM4	P38247	162 aa		5.41	□□□□□ -1.54
SIR2	YDL042C	MMS4	P38257	691 aa		5.41	□□□□□ -1.54
SIR2	YDL042C	HAT2	P39984	401 aa		5.41	□□□□□ -1.54
SIR2	YDL042C	YIF1	P53845	314 aa	Known RBP	5.41	□□□□□ -1.54
SIR2	YDL042C	NDD1	Q08887	554 aa		5.41	□□□□□ -1.54
SIR2	YDL042C	VPS54	Q12071	889 aa		5.41	□□□□□ -1.54
SIR2	YDL042C	SET6	Q12529	373 aa		5.41	□□□□□ -1.54
SIR2	YDL042C	HIP1	P06775	603 aa		5.4	□□□□□ -1.54
SIR2	YDL042C	YML002W	P0CF17	737 aa		5.4	□□□□□ -1.54
SIR2	YDL042C	RPI1	P23250	407 aa	Known RBP	5.4	□□□□□ -1.54
SIR2	YDL042C	BRF1	P29056	596 aa		5.4	□□□□□ -1.54
SIR2	YDL042C	RFC3	P38629	340 aa		5.4	□□□□□ -1.54
SIR2	YDL042C	LRP1	P38801	184 aa	Known RBP	5.4	□□□□□ -1.54
SIR2	YDL042C	RPR2	P40571	144 aa		5.4	□□□□□ -1.54
SIR2	YDL042C	SAS2	P40963	338 aa		5.4	□□□□□ -1.54
SIR2	YDL042C	CRZ1	P53968	678 aa		5.4	□□□□□ -1.54
SIR2	YDL042C	PNG1	Q02890	363 aa		5.4	□□□□□ -1.54
SIR2	YDL042C	YMR130W	Q04223	302 aa		5.4	□□□□□ -1.54
SIR2	YDL042C	ERP1	Q05359	219 aa	Known RBP	5.4	□□□□□ -1.54
SIR2	YDL042C	MDM30	Q05930	598 aa		5.4	□□□□□ -1.54
SIR2	YDL042C	MMR1	Q06324	491 aa		5.4	□□□□□ -1.54
SIR2	YDL042C	RKM1	Q08961	583 aa	Predicted RBP	5.4	□□□□□ -1.54
SIR2	YDL042C	AYT1	Q12226	474 aa		5.4	□□□□□ -1.54
SIR2	YDL042C	BCK1	Q01389	1478 aa		5.4	□□□□□ -1.54
SIR2	YDL042C	NUP192	P47054	1683 aa		5.4	□□□□□ -1.54
SIR2	YDL042C	RPL20A	P0CX23	172 aa	Known RBP	5.4	□□□□□ -1.55
SIR2	YDL042C	RPL20B	P0CX24	172 aa	Predicted RBP	5.4	□□□□□ -1.55
SIR2	YDL042C	GEX1	P25596	615 aa		5.4	□□□□□ -1.55
SIR2	YDL042C	APE2	P32454	952 aa	Known RBP	5.4	□□□□□ -1.55
SIR2	YDL042C	ALG8	P40351	577 aa		5.4	□□□□□ -1.55
SIR2	YDL042C	YJR011C	P47086	261 aa	Predicted RBP	5.4	□□□□□ -1.55
SIR2	YDL042C	PCP1	P53259	346 aa		5.4	□□□□□ -1.55
SIR2	YDL042C	DIS3	Q08162	1001 aa	Known RBP	5.4	□□□□□ -1.55
SIR2	YDL042C	CTF3	Q12748	733 aa		5.4	□□□□□ -1.55
SIR2	YDL042C	YCR100C	P25606	316 aa		5.39	□□□□□ -1.55
SIR2	YDL042C	YHR054C	P38780	354 aa		5.39	□□□□□ -1.55
SIR2	YDL042C	DHH1	P39517	506 aa	Known RBP	5.39	□□□□□ -1.55
SIR2	YDL042C	RPH1	P39956	796 aa		5.39	□□□□□ -1.55
SIR2	YDL042C	YAT2	P40017	923 aa		5.39	□□□□□ -1.55
SIR2	YDL042C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.39	□□□□□ -1.55	not detected
SIR2	YDL042C	YFR016C	P43597	1233 aa	Known RBP	5.39	□□□□□ -1.55
SIR2	YDL042C	TIP41	Q12199	356 aa		5.39	□□□□□ -1.55
SIR2	YDL042C	KRE5	P22023	1365 aa		5.39	□□□□□ -1.55
SIR2	YDL042C	YAR066W	P0CX18	203 aa		5.38	□□□□□ -1.55
SIR2	YDL042C	YHR214W	P0CX19	203 aa		5.38	□□□□□ -1.55
SIR2	YDL042C	CLN1	P20437	546 aa		5.38	□□□□□ -1.55
SIR2	YDL042C	NDI1	P32340	513 aa		5.38	□□□□□ -1.55
SIR2	YDL042C	ECM25	P32525	599 aa		5.38	□□□□□ -1.55
SIR2	YDL042C	PMU1	P36069	295 aa		5.38	□□□□□ -1.55
SIR2	YDL042C	MDM31	P38880	579 aa		5.38	□□□□□ -1.55
SIR2	YDL042C	TRS85	P46944	698 aa		5.38	□□□□□ -1.55
SIR2	YDL042C	RPT4	P53549	437 aa	Known RBP	5.38	□□□□□ -1.55
SIR2	YDL042C	VPS9	P54787	451 aa		5.38	□□□□□ -1.55
SIR2	YDL042C	GYL1	Q04322	720 aa		5.38	□□□□□ -1.55
SIR2	YDL042C	YMR317W	Q04893	1140 aa		5.38	□□□□□ -1.55
SIR2	YDL042C	MED2	Q12124	431 aa		5.38	□□□□□ -1.55
SIR2	YDL042C	GPM3	Q12326	303 aa		5.38	□□□□□ -1.55
SIR2	YDL042C	ATR1	P13090	542 aa		5.37	□□□□□ -1.55
SIR2	YDL042C	SPO7	P18410	259 aa		5.37	□□□□□ -1.55
SIR2	YDL042C	PRO3	P32263	286 aa	Known RBP	5.37	□□□□□ -1.55
SIR2	YDL042C	GCD10	P41814	478 aa		5.37	□□□□□ -1.55
SIR2	YDL042C	YIP1	P53039	248 aa		5.37	□□□□□ -1.55
SIR2	YDL042C	YGR111W	P53265	400 aa		5.37	□□□□□ -1.55
SIR2	YDL042C	ARK1	P53974	638 aa		5.37	□□□□□ -1.55
SIR2	YDL042C	DCS1	Q06151	350 aa		5.37	□□□□□ -1.55
SIR2	YDL042C	HIS4	P00815	799 aa	Known RBP	5.37	□□□□□ -1.55
SIR2	YDL042C	YCR041W	P37265	110 aa		5.37	□□□□□ -1.55
SIR2	YDL042C	ECM27	P47144	725 aa		5.37	□□□□□ -1.55
SIR2	YDL042C	ODC1	Q03028	310 aa		5.37	□□□□□ -1.55
SIR2	YDL042C	SXM1	Q04175	944 aa	Known RBP	5.37	□□□□□ -1.55
SIR2	YDL042C	TY1B-A	O13527	1196 aa	Known RBP	5.36	□□□□□ -1.55
SIR2	YDL042C	SCEI	P03882	235 aa		5.36	□□□□□ -1.55
SIR2	YDL042C	CRM1	P30822	1084 aa	Known RBP	5.36	□□□□□ -1.55
SIR2	YDL042C	LOS1	P33418	1100 aa	Predicted RBP	5.36	□□□□□ -1.55
SIR2	YDL042C	AVT4	P50944	713 aa		5.36	□□□□□ -1.55
SIR2	YDL042C	PIR3	Q03180	325 aa		5.36	□□□□□ -1.55
SIR2	YDL042C	HEL2	Q05580	639 aa	Known RBP	5.36	□□□□□ -1.55
SIR2	YDL042C	CDC60	P26637	1090 aa	Known RBP	5.35	□□□□□ -1.55
SIR2	YDL042C	GLC7	P32598	312 aa	Known RBP	5.35	□□□□□ -1.55
SIR2	YDL042C	SOR1	P35497	357 aa	Known RBP	5.35	□□□□□ -1.55
SIR2	YDL042C	SER3	P40054	469 aa		5.35	□□□□□ -1.55
SIR2	YDL042C	OAZ1	Q02803	292 aa		5.35	□□□□□ -1.55
SIR2	YDL042C	SOR2	Q07786	357 aa		5.35	□□□□□ -1.55
SIR2	YDL042C	DCI1	Q08558	271 aa		5.35	□□□□□ -1.55
SIR2	YDL042C	SNU66	Q12420	587 aa	Predicted RBP	5.35	□□□□□ -1.55
SIR2	YDL042C	RAD9	P14737	1309 aa		5.35	□□□□□ -1.55
SIR2	YDL042C	HEM2	P05373	342 aa		5.34	□□□□□ -1.55
SIR2	YDL042C	MNE1	P24720	663 aa		5.34	□□□□□ -1.55
SIR2	YDL042C	LCB2	P40970	561 aa		5.34	□□□□□ -1.55
SIR2	YDL042C	COS10	P52924	374 aa		5.34	□□□□□ -1.55
SIR2	YDL042C	YGL260W	P53056	76 aa		5.34	□□□□□ -1.55
SIR2	YDL042C	OCA2	P53949	197 aa		5.34	□□□□□ -1.55

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