RNA–Protein interactions for RNA: YCR067C

SED4, Transcript of Integral ER membrane protein that stimulates Sar1p GTPase activity, yeast

Gene SED4, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SED4	YCR067C	MIS1	P09440	975 aa	Known RBP	4.82	□□□□□ -1.64
SED4	YCR067C	LAT1	P12695	482 aa	Known RBP	4.82	□□□□□ -1.64
SED4	YCR067C	RPB4	P20433	221 aa	Predicted RBP	4.82	□□□□□ -1.64
SED4	YCR067C	IDP1	P21954	428 aa	Known RBP	4.82	□□□□□ -1.64
SED4	YCR067C	EDC3	P39998	551 aa	Known RBP	4.82	□□□□□ -1.64
SED4	YCR067C	ROK1	P45818	564 aa	Predicted RBP	4.82	□□□□□ -1.64
SED4	YCR067C	EFM5	P53200	248 aa	Known RBP	4.82	□□□□□ -1.64
SED4	YCR067C	MTD1	Q02046	320 aa	Known RBP	4.82	□□□□□ -1.64
SED4	YCR067C	NGL2	Q03264	515 aa	Known RBP	4.82	□□□□□ -1.64
SED4	YCR067C	SKY1	Q03656	742 aa		4.82	□□□□□ -1.64
SED4	YCR067C	TAF12	Q03761	539 aa		4.82	□□□□□ -1.64
SED4	YCR067C	PPN1	Q04119	674 aa		4.82	□□□□□ -1.64
SED4	YCR067C	RIF2	Q06208	395 aa		4.82	□□□□□ -1.64
SED4	YCR067C	TPO3	Q06451	622 aa		4.82	□□□□□ -1.64
SED4	YCR067C	SIR3	P06701	978 aa		4.81	□□□□□ -1.64
SED4	YCR067C	DBP1	P24784	617 aa	Known RBP	4.81	□□□□□ -1.64
SED4	YCR067C	APL3	P38065	1025 aa		4.81	□□□□□ -1.64
SED4	YCR067C	SBE22	P38814	852 aa		4.81	□□□□□ -1.64
SED4	YCR067C	YIL024C	P40543	189 aa		4.81	□□□□□ -1.64
SED4	YCR067C	OPT1	P40897	799 aa		4.81	□□□□□ -1.64
SED4	YCR067C	TIS11	P47977	285 aa		4.81	□□□□□ -1.64
SED4	YCR067C	YGR117C	P53270	476 aa		4.81	□□□□□ -1.64
SED4	YCR067C	PLB2	Q03674	706 aa		4.81	□□□□□ -1.64
SED4	YCR067C	YLR224W	Q05947	369 aa		4.81	□□□□□ -1.64
SED4	YCR067C	AAD4	Q07747	329 aa		4.81	□□□□□ -1.64
SED4	YCR067C	TRE2	Q08693	809 aa		4.81	□□□□□ -1.64
SED4	YCR067C	HRK1	Q08732	759 aa	Known RBP	4.81	□□□□□ -1.64
SED4	YCR067C	MDM32	Q12171	622 aa		4.81	□□□□□ -1.64
SED4	YCR067C	YPL066W	Q12194	479 aa		4.81	□□□□□ -1.64
SED4	YCR067C	YLR422W	Q06409	1932 aa		4.81	□□□□□ -1.64
SED4	YCR067C	GCN4	P03069	281 aa		4.81	□□□□□ -1.64
SED4	YCR067C	SNC1	P31109	117 aa		4.81	□□□□□ -1.64
SED4	YCR067C	KAP122	P32767	1081 aa		4.81	□□□□□ -1.64
SED4	YCR067C	PDR3	P33200	976 aa		4.81	□□□□□ -1.64
SED4	YCR067C	MSS4	P38994	779 aa		4.81	□□□□□ -1.64
SED4	YCR067C	AFG3	P39925	761 aa		4.81	□□□□□ -1.64
SED4	YCR067C	YER184C	P39961	794 aa		4.81	□□□□□ -1.64
SED4	YCR067C	ALD5	P40047	520 aa	Known RBP	4.81	□□□□□ -1.64
SED4	YCR067C	IST3	P40565	148 aa	Predicted RBP	4.81	□□□□□ -1.64
SED4	YCR067C	CAK1	P43568	368 aa	Predicted RBP	4.81	□□□□□ -1.64
SED4	YCR067C	INN1	P53901	409 aa		4.81	□□□□□ -1.64
SED4	YCR067C	CDC14	Q00684	551 aa		4.81	□□□□□ -1.64
SED4	YCR067C	IRC15	Q02733	499 aa		4.81	□□□□□ -1.64
SED4	YCR067C	YDR541C	Q03049	344 aa		4.81	□□□□□ -1.64
SED4	YCR067C	YDR132C	Q03900	495 aa		4.81	□□□□□ -1.64
SED4	YCR067C	YMR034C	Q05131	434 aa	Predicted RBP	4.81	□□□□□ -1.64
SED4	YCR067C	FRE3	Q08905	711 aa		4.81	□□□□□ -1.64
SED4	YCR067C	SLF1	Q12034	447 aa	Known RBP	4.81	□□□□□ -1.64
SED4	YCR067C	UPC2	Q12151	913 aa		4.81	□□□□□ -1.64
SED4	YCR067C	YPR063C	Q12160	140 aa		4.81	□□□□□ -1.64
SED4	YCR067C	RPS17A	P02407	136 aa	Known RBP	4.81	□□□□□ -1.64
SED4	YCR067C	CTT1	P06115	562 aa		4.81	□□□□□ -1.64
SED4	YCR067C	FUM1	P08417	488 aa	Known RBP	4.81	□□□□□ -1.64
SED4	YCR067C	RPS17B	P14127	136 aa	Known RBP	4.81	□□□□□ -1.64
SED4	YCR067C	PET309	P32522	965 aa	Predicted RBP	4.81	□□□□□ -1.64
SED4	YCR067C	RTG2	P32608	588 aa	Known RBP	4.81	□□□□□ -1.64
SED4	YCR067C	GLC3	P32775	704 aa		4.81	□□□□□ -1.64
SED4	YCR067C	TIM23	P32897	222 aa		4.81	□□□□□ -1.64
SED4	YCR067C	YER034W	P40022	185 aa	Known RBP	4.81	□□□□□ -1.64
SED4	YCR067C	RRG9	P40156	214 aa		4.81	□□□□□ -1.64
SED4	YCR067C	GTO1	P48239	356 aa		4.81	□□□□□ -1.64
SED4	YCR067C	SCY1	P53009	804 aa		4.81	□□□□□ -1.64
SED4	YCR067C	MTL1	P53214	551 aa		4.81	□□□□□ -1.64
SED4	YCR067C	SPP1	Q03012	353 aa		4.81	□□□□□ -1.64
SED4	YCR067C	YML020W	Q03722	664 aa		4.81	□□□□□ -1.64
SED4	YCR067C	YPR172W	Q06608	200 aa		4.81	□□□□□ -1.64
SED4	YCR067C	SSK1	Q07084	712 aa		4.81	□□□□□ -1.64
SED4	YCR067C	TRM8	Q12009	286 aa		4.81	□□□□□ -1.64
SED4	YCR067C	QCR7	P00128	127 aa		4.8	□□□□□ -1.64
SED4	YCR067C	AI3	P03877	415 aa		4.8	□□□□□ -1.64
SED4	YCR067C	GAL2	P13181	574 aa		4.8	□□□□□ -1.64
SED4	YCR067C	GRR1	P24814	1151 aa		4.8	□□□□□ -1.64
SED4	YCR067C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
SED4	YCR067C	BEM1	P29366	551 aa		4.8	□□□□□ -1.64
SED4	YCR067C	OAC1	P32332	324 aa		4.8	□□□□□ -1.64
SED4	YCR067C	SDH3	P33421	198 aa		4.8	□□□□□ -1.64
SED4	YCR067C	JEN1	P36035	616 aa		4.8	□□□□□ -1.64
SED4	YCR067C	SNU114	P36048	1008 aa	Known RBP	4.8	□□□□□ -1.64
SED4	YCR067C	FLO10	P36170	1169 aa		4.8	□□□□□ -1.64
SED4	YCR067C	DMA1	P38823	416 aa		4.8	□□□□□ -1.64
SED4	YCR067C	NVJ1	P38881	321 aa		4.8	□□□□□ -1.64
SED4	YCR067C	GID8	P40208	455 aa		4.8	□□□□□ -1.64
SED4	YCR067C	YJR107W	P47145	328 aa		4.8	□□□□□ -1.64
SED4	YCR067C	HOS2	P53096	452 aa	Predicted RBP	4.8	□□□□□ -1.64
SED4	YCR067C	ERV29	P53337	310 aa		4.8	□□□□□ -1.64
SED4	YCR067C	CWC24	P53769	259 aa		4.8	□□□□□ -1.64
SED4	YCR067C	RRG7	Q08774	242 aa	Predicted RBP	4.8	□□□□□ -1.64
SED4	YCR067C	FEX2	Q08991	375 aa		4.8	□□□□□ -1.64
SED4	YCR067C	YBR085C-A	O43137	85 aa		4.8	□□□□□ -1.64
SED4	YCR067C	APE1	P14904	514 aa		4.8	□□□□□ -1.64
SED4	YCR067C	AMD1	P15274	810 aa	Known RBP	4.8	□□□□□ -1.64
SED4	YCR067C	GUK1	P15454	187 aa	Known RBP	4.8	□□□□□ -1.64
SED4	YCR067C	PRE7	P23724	241 aa	Known RBP	4.8	□□□□□ -1.64
SED4	YCR067C	PKC1	P24583	1151 aa		4.8	□□□□□ -1.64
SED4	YCR067C	YUR1	P26725	428 aa		4.8	□□□□□ -1.64
SED4	YCR067C	RAD27	P26793	382 aa		4.8	□□□□□ -1.64
SED4	YCR067C	PMT2	P31382	759 aa		4.8	□□□□□ -1.64
SED4	YCR067C	MEI5	P32489	222 aa		4.8	□□□□□ -1.64
SED4	YCR067C	DHR2	P36009	735 aa	Predicted RBP	4.8	□□□□□ -1.64
SED4	YCR067C	RRF1	P38771	230 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms