RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	SHY1	P53266	389 aa		3.93	□□□□□ -1.78
UBS1	YBR165W	PEX25	Q02969	394 aa		3.93	□□□□□ -1.78
UBS1	YBR165W	MDM30	Q05930	598 aa		3.93	□□□□□ -1.78
UBS1	YBR165W	TSR2	Q06672	205 aa	Known RBP	3.93	□□□□□ -1.78
UBS1	YBR165W	SNX3	Q08826	162 aa	Known RBP	3.93	□□□□□ -1.78
UBS1	YBR165W	RTN2	Q12443	393 aa		3.93	□□□□□ -1.78
UBS1	YBR165W	YOL159C-A	Q3E769	90 aa		3.93	□□□□□ -1.78
UBS1	YBR165W	TRP1	P00912	224 aa		3.92	□□□□□ -1.78
UBS1	YBR165W	CTR86	P25355	563 aa		3.92	□□□□□ -1.78
UBS1	YBR165W	SNT1	P25357	1226 aa		3.92	□□□□□ -1.78
UBS1	YBR165W	ERG3	P32353	365 aa		3.92	□□□□□ -1.78
UBS1	YBR165W	RML2	P32611	393 aa		3.92	□□□□□ -1.78
UBS1	YBR165W	KKQ8	P36004	724 aa		3.92	□□□□□ -1.78
UBS1	YBR165W	MNP1	P53163	194 aa	Predicted RBP	3.92	□□□□□ -1.78
UBS1	YBR165W	SIL1	Q08199	421 aa		3.92	□□□□□ -1.78
UBS1	YBR165W	SKI7	Q08491	747 aa	Predicted RBP	3.92	□□□□□ -1.78
UBS1	YBR165W	PGA3	Q12746	312 aa	Known RBP	3.92	□□□□□ -1.78
UBS1	YBR165W	KRE2	P27809	442 aa		3.91	□□□□□ -1.78
UBS1	YBR165W	KAR9	P32526	644 aa		3.91	□□□□□ -1.78
UBS1	YBR165W	MUD1	P32605	298 aa	Known RBP	3.91	□□□□□ -1.78
UBS1	YBR165W	ARA1	P38115	344 aa		3.91	□□□□□ -1.78
UBS1	YBR165W	RKM1	Q08961	583 aa	Predicted RBP	3.91	□□□□□ -1.78
UBS1	YBR165W	HSP42	Q12329	375 aa		3.91	□□□□□ -1.78
UBS1	YBR165W	ILV5	P06168	395 aa	Known RBP	3.9	□□□□□ -1.79
UBS1	YBR165W	CYC3	P06182	269 aa		3.9	□□□□□ -1.79
UBS1	YBR165W	NPL6	P32832	435 aa		3.9	□□□□□ -1.79
UBS1	YBR165W	HMS2	P47175	358 aa		3.9	□□□□□ -1.79
UBS1	YBR165W	REX4	Q08237	289 aa		3.9	□□□□□ -1.79
UBS1	YBR165W	NAT1	P12945	854 aa	Known RBP	3.89	□□□□□ -1.79
UBS1	YBR165W	RED1	P14291	827 aa		3.89	□□□□□ -1.79
UBS1	YBR165W	CLB3	P24870	427 aa		3.89	□□□□□ -1.79
UBS1	YBR165W	SAS3	P34218	831 aa		3.89	□□□□□ -1.79
UBS1	YBR165W	RPS0B	P46654	252 aa	Known RBP	3.89	□□□□□ -1.79
UBS1	YBR165W	COS5	P47187	383 aa		3.89	□□□□□ -1.79
UBS1	YBR165W	TSA2	Q04120	196 aa		3.89	□□□□□ -1.79
UBS1	YBR165W	RRP45	Q05636	305 aa	Known RBP	3.89	□□□□□ -1.79
UBS1	YBR165W	COS7	Q07788	383 aa		3.89	□□□□□ -1.79
UBS1	YBR165W	PCF11	P39081	626 aa	Predicted RBP	3.88	□□□□□ -1.79
UBS1	YBR165W	BET5	Q03630	159 aa		3.88	□□□□□ -1.79
UBS1	YBR165W	TAF12	Q03761	539 aa		3.88	□□□□□ -1.79
UBS1	YBR165W	VAM3	Q12241	283 aa		3.88	□□□□□ -1.79
UBS1	YBR165W	CDC31	P06704	161 aa	Known RBP	3.87	□□□□□ -1.79
UBS1	YBR165W	RHB1	P25378	209 aa		3.87	□□□□□ -1.79
UBS1	YBR165W	POP5	P28005	173 aa		3.87	□□□□□ -1.79
UBS1	YBR165W	SMY1	P32364	656 aa	Known RBP	3.87	□□□□□ -1.79
UBS1	YBR165W	YAL037W	P39728	267 aa		3.87	□□□□□ -1.79
UBS1	YBR165W	GPI15	P53961	229 aa		3.87	□□□□□ -1.79
UBS1	YBR165W	IRC25	Q07951	179 aa		3.87	□□□□□ -1.79
UBS1	YBR165W	SCEI	P03882	235 aa		3.86	□□□□□ -1.79
UBS1	YBR165W	BEM1	P29366	551 aa		3.86	□□□□□ -1.79
UBS1	YBR165W	RPN12	P32496	274 aa		3.86	□□□□□ -1.79
UBS1	YBR165W	APE3	P37302	537 aa	Known RBP	3.86	□□□□□ -1.79
UBS1	YBR165W	NTC20	P38302	140 aa	Predicted RBP	3.86	□□□□□ -1.79
UBS1	YBR165W	JLP2	P40206	208 aa		3.86	□□□□□ -1.79
UBS1	YBR165W	SSU1	P41930	458 aa		3.86	□□□□□ -1.79
UBS1	YBR165W	BRO1	P48582	844 aa		3.86	□□□□□ -1.79
UBS1	YBR165W	AZR1	P50080	613 aa		3.86	□□□□□ -1.79
UBS1	YBR165W	SPO12	P17123	173 aa		3.85	□□□□□ -1.79
UBS1	YBR165W	RAD57	P25301	460 aa		3.85	□□□□□ -1.79
UBS1	YBR165W	HIR2	P32480	875 aa		3.85	□□□□□ -1.79
UBS1	YBR165W	YME2	P32843	850 aa		3.85	□□□□□ -1.79
UBS1	YBR165W	SUB1	P54000	292 aa	Known RBP	3.85	□□□□□ -1.79
UBS1	YBR165W	BCH1	Q05029	724 aa		3.85	□□□□□ -1.79
UBS1	YBR165W	COG4	Q06096	861 aa		3.85	□□□□□ -1.79
UBS1	YBR165W	SFI1	Q12369	946 aa		3.85	□□□□□ -1.79
UBS1	YBR165W	NFU1	P32860	256 aa		3.84	□□□□□ -1.79
UBS1	YBR165W	SWE1	P32944	819 aa		3.84	□□□□□ -1.79
UBS1	YBR165W	SOR1	P35497	357 aa	Known RBP	3.84	□□□□□ -1.79
UBS1	YBR165W	YGL138C	P53122	345 aa		3.84	□□□□□ -1.79
UBS1	YBR165W	RHO5	P53879	331 aa	Known RBP	3.84	□□□□□ -1.79
UBS1	YBR165W	ARX1	Q03862	593 aa	Known RBP	3.84	□□□□□ -1.79
UBS1	YBR165W	YLR287C	Q05881	355 aa		3.84	□□□□□ -1.79
UBS1	YBR165W	SOR2	Q07786	357 aa		3.84	□□□□□ -1.79
UBS1	YBR165W	SRL2	Q12020	392 aa		3.84	□□□□□ -1.79
UBS1	YBR165W	SCM3	Q12334	223 aa		3.84	□□□□□ -1.79
UBS1	YBR165W	SPO7	P18410	259 aa		3.83	□□□□□ -1.8
UBS1	YBR165W	GAB1	P41733	394 aa		3.83	□□□□□ -1.8
UBS1	YBR165W	PHO86	P46956	311 aa		3.83	□□□□□ -1.8
UBS1	YBR165W	HAL1	Q01766	294 aa		3.83	□□□□□ -1.8
UBS1	YBR165W	SKO1	Q02100	647 aa		3.83	□□□□□ -1.8
UBS1	YBR165W	GIP3	Q03016	1276 aa		3.83	□□□□□ -1.8
UBS1	YBR165W	YRM1	Q12340	786 aa		3.83	□□□□□ -1.8
UBS1	YBR165W	ISN1	Q99312	450 aa		3.83	□□□□□ -1.8
UBS1	YBR165W	NIP1	P32497	812 aa	Known RBP	3.82	□□□□□ -1.8
UBS1	YBR165W	NUP2	P32499	720 aa		3.82	□□□□□ -1.8
UBS1	YBR165W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.82	□□□□□ -1.8	not detected
UBS1	YBR165W	SFH5	P47008	294 aa		3.82	□□□□□ -1.8
UBS1	YBR165W	MDE1	P47095	244 aa		3.82	□□□□□ -1.8
UBS1	YBR165W	PCL1	P24867	279 aa		3.81	□□□□□ -1.8
UBS1	YBR165W	CSE2	P33308	149 aa		3.81	□□□□□ -1.8
UBS1	YBR165W	UTH1	P36135	365 aa		3.81	□□□□□ -1.8
UBS1	YBR165W	MRPL10	P36520	322 aa		3.81	□□□□□ -1.8
UBS1	YBR165W	UTP18	P40362	594 aa	Predicted RBP	3.81	□□□□□ -1.8
UBS1	YBR165W	OAZ1	Q02803	292 aa		3.81	□□□□□ -1.8
UBS1	YBR165W	DON1	Q05610	365 aa		3.81	□□□□□ -1.8
UBS1	YBR165W	CUE5	Q08412	411 aa	Known RBP	3.81	□□□□□ -1.8
UBS1	YBR165W	PLP2	Q12017	286 aa		3.81	□□□□□ -1.8
UBS1	YBR165W	BUG1	Q12191	341 aa		3.81	□□□□□ -1.8
UBS1	YBR165W	SNU66	Q12420	587 aa	Predicted RBP	3.81	□□□□□ -1.8
UBS1	YBR165W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.8	□□□□□ -1.8	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms