RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C GAT2P40209 560 aa2.27□□□□□ -2.05
PRP6YBR055C VPS25P47142 202 aa2.27□□□□□ -2.05
PRP6YBR055C YNL234WP53857 426 aa2.27□□□□□ -2.05
PRP6YBR055C RHO4Q00246 291 aa2.27□□□□□ -2.05
PRP6YBR055C GIP3Q03016 1276 aa2.27□□□□□ -2.05
PRP6YBR055C VPS20Q04272 221 aa2.27□□□□□ -2.05
PRP6YBR055C IVY1Q04934 453 aa2.27□□□□□ -2.05
PRP6YBR055C RLP24Q07915 199 aaKnown RBP2.27□□□□□ -2.05
PRP6YBR055C IRC10Q08118 586 aa2.27□□□□□ -2.05
PRP6YBR055C GSH2Q08220 491 aa2.27□□□□□ -2.05
PRP6YBR055C MSL5Q12186 476 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
PRP6YBR055C RKM5Q12367 367 aa2.27□□□□□ -2.05
PRP6YBR055C GCD2P12754 651 aaPredicted RBP2.26□□□□□ -2.05
PRP6YBR055C CYS4P32582 507 aaKnown RBP2.26□□□□□ -2.05
PRP6YBR055C STP2P38704 541 aa2.26□□□□□ -2.05
PRP6YBR055C SSO2P39926 295 aa2.26□□□□□ -2.05
PRP6YBR055C TRS85P46944 698 aa2.26□□□□□ -2.05
PRP6YBR055C GPI1P53306 609 aa2.26□□□□□ -2.05
PRP6YBR055C NUP100Q02629 959 aa2.26□□□□□ -2.05
PRP6YBR055C GLO2Q05584 274 aa2.26□□□□□ -2.05
PRP6YBR055C MSC3Q05812 728 aa2.26□□□□□ -2.05
PRP6YBR055C SAM1P10659 382 aaKnown RBP2.26□□□□□ -2.05
PRP6YBR055C ADY2P25613 283 aa2.26□□□□□ -2.05
PRP6YBR055C PSO2P30620 661 aa2.26□□□□□ -2.05
PRP6YBR055C FLO10P36170 1169 aa2.26□□□□□ -2.05
PRP6YBR055C PCP1P53259 346 aa2.26□□□□□ -2.05
PRP6YBR055C CWC22P53333 577 aaKnown RBP2.26□□□□□ -2.05
PRP6YBR055C ALF1P53904 254 aa2.26□□□□□ -2.05
PRP6YBR055C CTL1Q03220 320 aaKnown RBP2.26□□□□□ -2.05
PRP6YBR055C NSE1Q07913 336 aa2.26□□□□□ -2.05
PRP6YBR055C NRT1Q08485 598 aa2.26□□□□□ -2.05
PRP6YBR055C PEX27Q08580 376 aa2.26□□□□□ -2.05
PRP6YBR055C YLR112WQ12130 139 aa2.26□□□□□ -2.05
PRP6YBR055C MRPL23Q12487 163 aaPredicted RBP2.26□□□□□ -2.05
PRP6YBR055C CDC37P06101 506 aaKnown RBP2.26□□□□□ -2.05
PRP6YBR055C CHS1P08004 1131 aa2.26□□□□□ -2.05
PRP6YBR055C UTR4P32626 227 aa2.26□□□□□ -2.05
PRP6YBR055C RAD24P32641 659 aa2.26□□□□□ -2.05
PRP6YBR055C PHD1P36093 366 aa2.26□□□□□ -2.05
PRP6YBR055C YBL028CP38202 106 aa2.26□□□□□ -2.05
PRP6YBR055C YHR131CP38835 850 aa2.26□□□□□ -2.05
PRP6YBR055C LIN1P38852 340 aaPredicted RBP2.26□□□□□ -2.05
PRP6YBR055C MNN9P39107 395 aaKnown RBP2.26□□□□□ -2.05
PRP6YBR055C YER079WP40052 210 aaKnown RBP2.26□□□□□ -2.05
PRP6YBR055C PAC11P40960 533 aa2.26□□□□□ -2.05
PRP6YBR055C GAT1P43574 510 aa2.26□□□□□ -2.05
PRP6YBR055C YHC3P47040 408 aa2.26□□□□□ -2.05
PRP6YBR055C EGD1Q02642 157 aaKnown RBP2.26□□□□□ -2.05
PRP6YBR055C YLR413WQ06689 675 aa2.26□□□□□ -2.05
PRP6YBR055C YLL056CQ12177 298 aa2.26□□□□□ -2.05
PRP6YBR055C BUG1Q12191 341 aa2.26□□□□□ -2.05
PRP6YBR055C FRE7Q12333 620 aa2.26□□□□□ -2.05
PRP6YBR055C YIL002W-AQ3E7Z5 69 aa2.26□□□□□ -2.05
PRP6YBR055C TY2B-BQ12491 1770 aa2.26□□□□□ -2.05
PRP6YBR055C YPK9Q12697 1472 aa2.25□□□□□ -2.05
PRP6YBR055C DST1P07273 309 aa2.25□□□□□ -2.05
PRP6YBR055C IMA3P0CW40 589 aa2.25□□□□□ -2.05
PRP6YBR055C IMA4P0CW41 589 aa2.25□□□□□ -2.05
PRP6YBR055C RAD57P25301 460 aa2.25□□□□□ -2.05
PRP6YBR055C SMY1P32364 656 aaKnown RBP2.25□□□□□ -2.05
PRP6YBR055C YHR177WP38867 453 aa2.25□□□□□ -2.05
PRP6YBR055C END3P39013 349 aa2.25□□□□□ -2.05
PRP6YBR055C FAU1P40099 211 aa2.25□□□□□ -2.05
PRP6YBR055C SCD6P45978 349 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05 RIP-Chip
PRP6YBR055C BRO1P48582 844 aa2.25□□□□□ -2.05
PRP6YBR055C PHB2P50085 310 aa2.25□□□□□ -2.05
PRP6YBR055C SLI1P53304 468 aa2.25□□□□□ -2.05
PRP6YBR055C NRD1P53617 575 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
PRP6YBR055C SLD5Q03406 294 aa2.25□□□□□ -2.05
PRP6YBR055C CAC2Q04199 468 aa2.25□□□□□ -2.05
PRP6YBR055C YMR310CQ04867 317 aaPredicted RBP2.25□□□□□ -2.05
PRP6YBR055C YLR297WQ05899 129 aa2.25□□□□□ -2.05
PRP6YBR055C CUR1Q06469 252 aa2.25□□□□□ -2.05
PRP6YBR055C IMA2Q08295 589 aa2.25□□□□□ -2.05
PRP6YBR055C RUP1Q12242 671 aa2.25□□□□□ -2.05
PRP6YBR055C YRF1-1P0CX20 1796 aa2.25□□□□□ -2.05
PRP6YBR055C YRF1-5P0CX21 1796 aa2.25□□□□□ -2.05
PRP6YBR055C YRF1-8P0CX22 1796 aa2.25□□□□□ -2.05
PRP6YBR055C OPI3P05375 206 aa2.25□□□□□ -2.05
PRP6YBR055C SLM5P25345 492 aaKnown RBP2.25□□□□□ -2.05
PRP6YBR055C BUB3P26449 341 aa2.25□□□□□ -2.05
PRP6YBR055C FRE1P32791 686 aa2.25□□□□□ -2.05
PRP6YBR055C RGT1P32862 1170 aa2.25□□□□□ -2.05
PRP6YBR055C SCO2P38072 301 aa2.25□□□□□ -2.05
PRP6YBR055C YBR139WP38109 508 aa2.25□□□□□ -2.05
PRP6YBR055C LEU5P38702 357 aa2.25□□□□□ -2.05
PRP6YBR055C RTT107P38850 1070 aa2.25□□□□□ -2.05
PRP6YBR055C AIM20P40451 204 aa2.25□□□□□ -2.05
PRP6YBR055C SNL1P40548 159 aa2.25□□□□□ -2.05
PRP6YBR055C HMS2P47175 358 aa2.25□□□□□ -2.05
PRP6YBR055C YPT11P48559 417 aa2.25□□□□□ -2.05
PRP6YBR055C ORM2Q06144 216 aa2.25□□□□□ -2.05
PRP6YBR055C ECM7Q06200 448 aa2.25□□□□□ -2.05
PRP6YBR055C REX4Q08237 289 aa2.25□□□□□ -2.05
PRP6YBR055C CHD1P32657 1468 aa2.24□□□□□ -2.05
PRP6YBR055C SCC2Q04002 1493 aa2.24□□□□□ -2.05
PRP6YBR055C NTE1Q04958 1679 aa2.24□□□□□ -2.05
PRP6YBR055C HIS4P00815 799 aaKnown RBP2.24□□□□□ -2.05
PRP6YBR055C MAS1P10507 462 aa2.24□□□□□ -2.05
PRP6YBR055C GAL3P13045 520 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms