RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 SNX29Q8TEQ0 813 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 WHAMMQ8TF30 809 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 PPM1EQ8WY54 764 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 STAMQ92783 540 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 NAP1L3Q99457 506 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-250ENST00000568290 TMUB1Q9BVT8 246 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 TRIM34Q9BYJ4 488 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 TTYH3Q9C0H2 523 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 COA1Q9GZY4 146 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 RASSF4Q9H2L5 321 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 DHX36Q9H2U1 1008 aaKnown RBP8.43□□□□□ -1.06
ATXN3-250ENST00000568290 SH2D4AQ9H788 454 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 ZSWIM4Q9H7M6 989 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 IL17RBQ9NRM6 502 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 TFCP2L1Q9NZI6 479 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 CCNL1Q9UK58 526 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-250ENST00000568290 PCDHA12Q9UN75 941 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 DIS3Q9Y2L1 958 aaKnown RBP8.43□□□□□ -1.06
ATXN3-250ENST00000568290 A0A1B0GUL6 1792 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 STRCQ7RTU9 1775 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 MYH13Q9UKX3 1938 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 GOLGA6CA6NDK9 693 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 TRIM66O15016 1216 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 PPFIA4O75335 1185 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 FLOT1O75955 427 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 GOLGA6DP0CG33 693 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 EPB41P11171 864 aaKnown RBP8.42□□□□□ -1.06
ATXN3-250ENST00000568290 GBP1P32455 592 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 TXKP42681 527 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 KIF11P52732 1056 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 HNRNPH2P55795 449 aaKnown RBP8.42□□□□□ -1.06
ATXN3-250ENST00000568290 VSNL1P62760 191 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 SETQ01105 290 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-250ENST00000568290 MTMR3Q13615 1198 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 IL17AQ16552 155 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 AMHR2Q16671 573 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 FAM26FQ5R3K3 315 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 CFAP58Q5T655 872 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 C8orf74Q6P047 294 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 CCNI2Q6ZMN8 369 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-250ENST00000568290 C2CD5Q86YS7 1000 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 IRF2BP1Q8IU81 584 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 LINC00116Q8NCU8 138 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 NKX2-3Q8TAU0 364 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 SH3RF3Q8TEJ3 882 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-250ENST00000568290 DCAF4Q8WV16 495 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 LRRC45Q96CN5 670 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 PBKQ96KB5 322 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 MTMR9Q96QG7 549 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 CRAMP1Q96RY5 1269 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 CHP1Q99653 195 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 MTRQ99707 1265 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 DUSP9Q99956 384 aaKnown RBP8.42□□□□□ -1.06
ATXN3-250ENST00000568290 CD209Q9NNX6 404 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 GOLGA6AQ9NYA3 693 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 DDX25Q9UHL0 483 aaKnown RBP8.42□□□□□ -1.06
ATXN3-250ENST00000568290 INTUQ9ULD6 942 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 RABGAP1Q9Y3P9 1069 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.42□□□□□ -1.06
ATXN3-250ENST00000568290 GAKO14976 1311 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 FAM205AQ6ZU69 1335 aa8.42□□□□□ -1.06
ATXN3-250ENST00000568290 COL1A1P02452 1464 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-250ENST00000568290 COL5A3P25940 1745 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-250ENST00000568290 TNRC6CQ9HCJ0 1690 aaKnown RBP8.41□□□□□ -1.06
ATXN3-250ENST00000568290 COL16A1Q07092 1604 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-250ENST00000568290 FLT1P17948 1338 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 CCDC188H7C350 402 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 RBAK-RBAKDNI3L0D1 243 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 SMAPO00193 183 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 TRAF5O00463 557 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 EBAG9O00559 213 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 ZBTB5O15062 677 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 SLC16A3O15427 465 aaKnown RBP8.41□□□□□ -1.06
ATXN3-250ENST00000568290 NMT2O60551 498 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 RNF40O75150 1001 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 SASH3O75995 380 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 UFL1O94874 794 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 OATP04181 439 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 SNHG28P0DPA3 235 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 GAP43P17677 238 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 RFX1P22670 979 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 CASP1P29466 404 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 HERVK_113P62684 666 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 CETN1Q12798 172 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 TMEM119Q4V9L6 283 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 PDXDC1Q6P996 788 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 RRAGAQ7L523 313 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 ARMC9Q7Z3E5 817 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 FRMD5Q7Z6J6 570 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 MAPKAPK5Q8IW41 473 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 EFCAB13Q8IY85 973 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 STAG2Q8N3U4 1231 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 LRRN4CLQ8ND94 238 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 CCDC26Q8TAB7 109 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 CAVIN3Q969G5 261 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 FAM20AQ96MK3 541 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 MRIQ9BWK5 157 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 RTFDC1Q9BY42 306 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-250ENST00000568290 EHD4Q9H223 541 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 TMEM60Q9H2L4 133 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms