RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 PALM3A6NDB9 673 aaPredicted RBP23.19■■□□□ 1.3
NPAS3-210ENST00000551492 OPLAHO14841 1288 aa23.19■■□□□ 1.3
NPAS3-210ENST00000551492 GNPTABQ3T906 1256 aa23.19■■□□□ 1.3
NPAS3-210ENST00000551492 USH1GQ495M9 461 aa23.19■■□□□ 1.3
NPAS3-210ENST00000551492 CCDC178Q5BJE1 867 aa23.19■■□□□ 1.3
NPAS3-210ENST00000551492 CYB5D1Q6P9G0 228 aa23.19■■□□□ 1.3
NPAS3-210ENST00000551492 TRIM42Q8IWZ5 723 aa23.19■■□□□ 1.3
NPAS3-210ENST00000551492 GPC2Q8N158 579 aa23.19■■□□□ 1.3
NPAS3-210ENST00000551492 SLX1AQ9BQ83 275 aa23.19■■□□□ 1.3
NPAS3-210ENST00000551492 CD151P48509 253 aa23.19■■□□□ 1.3
NPAS3-210ENST00000551492 VPS33BQ9H267 617 aa23.19■■□□□ 1.3
NPAS3-210ENST00000551492 ZNF408Q9H9D4 720 aa23.19■■□□□ 1.3
NPAS3-210ENST00000551492 LTBP3Q9NS15 1303 aa23.19■■□□□ 1.3
NPAS3-210ENST00000551492 ME1P48163 572 aa23.18■■□□□ 1.3
NPAS3-210ENST00000551492 PGAP2Q9UHJ9 254 aa23.18■■□□□ 1.3
NPAS3-210ENST00000551492 PCDHB6Q9Y5E3 794 aa23.18■■□□□ 1.3
NPAS3-210ENST00000551492 NDUFB10O96000 172 aa23.18■■□□□ 1.3
NPAS3-210ENST00000551492 MMP1P03956 469 aa23.18■■□□□ 1.3
NPAS3-210ENST00000551492 SCG2P13521 617 aa23.18■■□□□ 1.3
NPAS3-210ENST00000551492 PIK3AP1Q6ZUJ8 805 aa23.18■■□□□ 1.3
NPAS3-210ENST00000551492 ADGRF4Q8IZF3 695 aa23.18■■□□□ 1.3
NPAS3-210ENST00000551492 ATL2Q8NHH9 583 aa23.18■■□□□ 1.3
NPAS3-210ENST00000551492 NSMCE1Q8WV22 266 aa23.18■■□□□ 1.3
NPAS3-210ENST00000551492 TCP11L1Q9NUJ3 509 aa23.18■■□□□ 1.3
NPAS3-210ENST00000551492 TMEM260Q9NX78 707 aa23.18■■□□□ 1.3
NPAS3-210ENST00000551492 TMEM232C9JQI7 657 aa23.18■■□□□ 1.3
NPAS3-210ENST00000551492 LGR5O75473 907 aa23.18■■□□□ 1.3
NPAS3-210ENST00000551492 NEFHP12036 1026 aa23.18■■□□□ 1.3
NPAS3-210ENST00000551492 TMEM132AQ24JP5 1023 aa23.18■■□□□ 1.3
NPAS3-210ENST00000551492 DPF2Q92785 391 aa23.18■■□□□ 1.3
NPAS3-210ENST00000551492 BICD1Q96G01 975 aa23.18■■□□□ 1.3
NPAS3-210ENST00000551492 ZBTB21Q9ULJ3 1066 aa23.18■■□□□ 1.3
NPAS3-210ENST00000551492 PRPF3O43395 683 aaKnown RBP23.17■■□□□ 1.3
NPAS3-210ENST00000551492 PPP1R11O60927 126 aaPredicted RBP23.17■■□□□ 1.3
NPAS3-210ENST00000551492 KIF5BP33176 963 aa23.17■■□□□ 1.3
NPAS3-210ENST00000551492 TOB1P50616 345 aaPredicted RBP23.17■■□□□ 1.3
NPAS3-210ENST00000551492 CWF19L1Q69YN2 538 aaKnown RBP23.17■■□□□ 1.3
NPAS3-210ENST00000551492 RGL1Q9NZL6 768 aa23.17■■□□□ 1.3
NPAS3-210ENST00000551492 TRIM75PA6NK02 468 aa23.17■■□□□ 1.3
NPAS3-210ENST00000551492 NPY5RQ15761 445 aa23.17■■□□□ 1.3
NPAS3-210ENST00000551492 FAM83BQ5T0W9 1011 aa23.17■■□□□ 1.3
NPAS3-210ENST00000551492 RBM12BQ8IXT5 1001 aaKnown RBP23.17■■□□□ 1.3
NPAS3-210ENST00000551492 RNF26Q9BY78 433 aaPredicted RBP23.17■■□□□ 1.3
NPAS3-210ENST00000551492 ZNF341Q9BYN7 854 aa23.17■■□□□ 1.3
NPAS3-210ENST00000551492 GOLGA6CA6NDK9 693 aa23.16■■□□□ 1.3
NPAS3-210ENST00000551492 GOLGA6DP0CG33 693 aa23.16■■□□□ 1.3
NPAS3-210ENST00000551492 ZNF174Q15697 407 aa23.16■■□□□ 1.3
NPAS3-210ENST00000551492 WRNIP1Q96S55 665 aa23.16■■□□□ 1.3
NPAS3-210ENST00000551492 PHACTR1Q9C0D0 580 aa23.16■■□□□ 1.3
NPAS3-210ENST00000551492 KANSL2Q9H9L4 492 aa23.16■■□□□ 1.3
NPAS3-210ENST00000551492 GOLGA6AQ9NYA3 693 aa23.16■■□□□ 1.3
NPAS3-210ENST00000551492 MYH4Q9Y623 1939 aa23.16■■□□□ 1.3
NPAS3-210ENST00000551492 PSME4Q14997 1843 aa23.16■■□□□ 1.3
NPAS3-210ENST00000551492 CALM1P0DP23 149 aa23.16■■□□□ 1.3
NPAS3-210ENST00000551492 CALM2P0DP24 149 aa23.16■■□□□ 1.3
NPAS3-210ENST00000551492 CALM3P0DP25 149 aa23.16■■□□□ 1.3
NPAS3-210ENST00000551492 AARSP49588 968 aaKnown RBP eCLIP23.16■■□□□ 1.3
NPAS3-210ENST00000551492 MYO1EQ12965 1108 aa23.16■■□□□ 1.3
NPAS3-210ENST00000551492 MMADHCQ9H3L0 296 aaPredicted RBP23.16■■□□□ 1.3
NPAS3-210ENST00000551492 HPCAL4Q9UM19 191 aa23.16■■□□□ 1.3
NPAS3-210ENST00000551492 TRPC6Q9Y210 931 aa23.16■■□□□ 1.3
NPAS3-210ENST00000551492 A0A1B0GVL5 298 aa23.15■■□□□ 1.3
NPAS3-210ENST00000551492 SMNDC1O75940 238 aaKnown RBP eCLIP23.15■■□□□ 1.3
NPAS3-210ENST00000551492 PAPOLAP51003 745 aaKnown RBP23.15■■□□□ 1.3
NPAS3-210ENST00000551492 UBE2SQ16763 222 aa23.15■■□□□ 1.3
NPAS3-210ENST00000551492 TOGARAM2Q6ZUX3 1019 aa23.15■■□□□ 1.3
NPAS3-210ENST00000551492 FAM81AQ8TBF8 368 aa23.15■■□□□ 1.3
NPAS3-210ENST00000551492 CCDC114Q96M63 670 aa23.15■■□□□ 1.3
NPAS3-210ENST00000551492 DESI2Q9BSY9 194 aa23.15■■□□□ 1.3
NPAS3-210ENST00000551492 HAUS2Q9NVX0 235 aa23.15■■□□□ 1.3
NPAS3-210ENST00000551492 FILIP1LQ4L180 1135 aa23.15■■□□□ 1.3
NPAS3-210ENST00000551492 GJA10Q969M2 543 aa23.15■■□□□ 1.3
NPAS3-210ENST00000551492 STAMBPL1Q96FJ0 436 aa23.15■■□□□ 1.3
NPAS3-210ENST00000551492 JMJD4Q9H9V9 463 aa23.15■■□□□ 1.3
NPAS3-210ENST00000551492 ZC3H4Q9UPT8 1303 aaKnown RBP23.15■■□□□ 1.3
NPAS3-210ENST00000551492 ZSCAN12O43309 604 aa23.14■■□□□ 1.3
NPAS3-210ENST00000551492 CAP2P40123 477 aa23.14■■□□□ 1.3
NPAS3-210ENST00000551492 STK38Q15208 465 aa23.14■■□□□ 1.3
NPAS3-210ENST00000551492 TMEM179Q6ZVK1 233 aa23.14■■□□□ 1.3
NPAS3-210ENST00000551492 FUKQ8N0W3 1084 aa23.14■■□□□ 1.3
NPAS3-210ENST00000551492 ANKS1AQ92625 1134 aa23.14■■□□□ 1.3
NPAS3-210ENST00000551492 GBP3Q9H0R5 595 aa23.14■■□□□ 1.3
NPAS3-210ENST00000551492 CLEC11AQ9Y240 323 aa23.14■■□□□ 1.3
NPAS3-210ENST00000551492 GNAT1P11488 350 aa23.14■■□□□ 1.29
NPAS3-210ENST00000551492 RPS12P25398 132 aaKnown RBP23.14■■□□□ 1.29
NPAS3-210ENST00000551492 CDC25AP30304 524 aa23.14■■□□□ 1.29
NPAS3-210ENST00000551492 ZNF543Q08ER8 600 aa23.14■■□□□ 1.29
NPAS3-210ENST00000551492 CCDC174Q6PII3 467 aa23.14■■□□□ 1.29
NPAS3-210ENST00000551492 MAPK8IP1Q9UQF2 711 aa23.14■■□□□ 1.29
NPAS3-210ENST00000551492 ARFGEF1Q9Y6D6 1849 aa23.14■■□□□ 1.29
NPAS3-210ENST00000551492 DNAH12Q6ZR08 3092 aa23.14■■□□□ 1.29
NPAS3-210ENST00000551492 PHF20L1A8MW92 1017 aa23.14■■□□□ 1.29
NPAS3-210ENST00000551492 ATP6V1G1O75348 118 aa23.14■■□□□ 1.29
NPAS3-210ENST00000551492 FESP07332 822 aa23.14■■□□□ 1.29
NPAS3-210ENST00000551492 LMOD1P29536 600 aaPredicted RBP23.14■■□□□ 1.29
NPAS3-210ENST00000551492 ARHGAP25P42331 645 aa23.14■■□□□ 1.29
NPAS3-210ENST00000551492 NAPAP54920 295 aa23.14■■□□□ 1.29
NPAS3-210ENST00000551492 PFKFB3Q16875 520 aaPredicted RBP23.14■■□□□ 1.29
NPAS3-210ENST00000551492 B4GALNT4Q76KP1 1039 aa23.14■■□□□ 1.29
NPAS3-210ENST00000551492 NOA1Q8NC60 698 aaKnown RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms