RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 TMTC2Q8N394 836 aa18.33■□□□□ 0.52
COX6A1-203ENST00000550009 RETREG2Q8NC44 543 aa18.33■□□□□ 0.52
COX6A1-203ENST00000550009 PPM1EQ8WY54 764 aa18.33■□□□□ 0.52
COX6A1-203ENST00000550009 GPR20Q99678 358 aa18.33■□□□□ 0.52
COX6A1-203ENST00000550009 PSTPIP2Q9H939 334 aa18.33■□□□□ 0.52
COX6A1-203ENST00000550009 EVPLQ92817 2033 aa18.32■□□□□ 0.52
COX6A1-203ENST00000550009 KLF18A0A0U1RQI7 1052 aa18.32■□□□□ 0.52
COX6A1-203ENST00000550009 PPFIA4O75335 1185 aa18.32■□□□□ 0.52
COX6A1-203ENST00000550009 GNAQP50148 359 aa18.32■□□□□ 0.52
COX6A1-203ENST00000550009 DEFB103AP81534 67 aa18.32■□□□□ 0.52
COX6A1-203ENST00000550009 APOBRQ0VD83 1088 aa18.32■□□□□ 0.52
COX6A1-203ENST00000550009 BFSP2Q13515 415 aa18.32■□□□□ 0.52
COX6A1-203ENST00000550009 TSGA10IPQ3SY00 556 aa18.32■□□□□ 0.52
COX6A1-203ENST00000550009 UTP14CQ5TAP6 766 aaKnown RBP18.32■□□□□ 0.52
COX6A1-203ENST00000550009 PCNX4Q63HM2 1172 aa18.32■□□□□ 0.52
COX6A1-203ENST00000550009 LRRC8DQ7L1W4 858 aa18.32■□□□□ 0.52
COX6A1-203ENST00000550009 CYP2W1Q8TAV3 490 aa18.32■□□□□ 0.52
COX6A1-203ENST00000550009 LZTS2Q9BRK4 669 aa18.32■□□□□ 0.52
COX6A1-203ENST00000550009 TMEM260Q9NX78 707 aa18.32■□□□□ 0.52
COX6A1-203ENST00000550009 SNX14Q9Y5W7 946 aa18.32■□□□□ 0.52
COX6A1-203ENST00000550009 MUC3AQ02505 3323 aa18.31■□□□□ 0.52
COX6A1-203ENST00000550009 TREHO43280 583 aa18.31■□□□□ 0.52
COX6A1-203ENST00000550009 SMIM10L2AP0DMW4 78 aa18.31■□□□□ 0.52
COX6A1-203ENST00000550009 SMIM10L2BP0DMW5 78 aa18.31■□□□□ 0.52
COX6A1-203ENST00000550009 CALM1P0DP23 149 aa18.31■□□□□ 0.52
COX6A1-203ENST00000550009 CALM2P0DP24 149 aa18.31■□□□□ 0.52
COX6A1-203ENST00000550009 CALM3P0DP25 149 aa18.31■□□□□ 0.52
COX6A1-203ENST00000550009 TGFB3P10600 412 aa18.31■□□□□ 0.52
COX6A1-203ENST00000550009 RTN1Q16799 776 aa18.31■□□□□ 0.52
COX6A1-203ENST00000550009 KCNV1Q6PIU1 500 aa18.31■□□□□ 0.52
COX6A1-203ENST00000550009 CUL5Q93034 780 aa18.31■□□□□ 0.52
COX6A1-203ENST00000550009 ZBTB10Q96DT7 871 aa18.31■□□□□ 0.52
COX6A1-203ENST00000550009 COL25A1Q9BXS0 654 aaPredicted RBP18.31■□□□□ 0.52
COX6A1-203ENST00000550009 MSRAQ9UJ68 235 aa18.31■□□□□ 0.52
COX6A1-203ENST00000550009 PCDHA6Q9UN73 950 aa18.31■□□□□ 0.52
COX6A1-203ENST00000550009 PCDHA8Q9Y5H6 950 aa18.31■□□□□ 0.52
COX6A1-203ENST00000550009 V9GY48 417 aaPredicted RBP18.31■□□□□ 0.52
COX6A1-203ENST00000550009 CUL9Q8IWT3 2517 aa18.31■□□□□ 0.52
COX6A1-203ENST00000550009 LCHNA4D1U4 455 aa18.3■□□□□ 0.52
COX6A1-203ENST00000550009 H3BRB1 525 aa18.3■□□□□ 0.52
COX6A1-203ENST00000550009 ZBTB43O43298 467 aa18.3■□□□□ 0.52
COX6A1-203ENST00000550009 FIBPO43427 364 aa18.3■□□□□ 0.52
COX6A1-203ENST00000550009 CA3P07451 260 aa18.3■□□□□ 0.52
COX6A1-203ENST00000550009 SELPP16109 830 aa18.3■□□□□ 0.52
COX6A1-203ENST00000550009 KCNA2P16389 499 aa18.3■□□□□ 0.52
COX6A1-203ENST00000550009 ADD1P35611 737 aaKnown RBP18.3■□□□□ 0.52
COX6A1-203ENST00000550009 TRAF1Q13077 416 aa18.3■□□□□ 0.52
COX6A1-203ENST00000550009 CCDC85BQ15834 202 aaPredicted RBP18.3■□□□□ 0.52
COX6A1-203ENST00000550009 RNF20Q5VTR2 975 aa18.3■□□□□ 0.52
COX6A1-203ENST00000550009 KRT40Q6A162 431 aa18.3■□□□□ 0.52
COX6A1-203ENST00000550009 KCNB2Q92953 911 aa18.3■□□□□ 0.52
COX6A1-203ENST00000550009 JAKMIP1Q96N16 626 aaKnown RBP18.3■□□□□ 0.52
COX6A1-203ENST00000550009 UIMC1Q96RL1 719 aa18.3■□□□□ 0.52
COX6A1-203ENST00000550009 KATNAL1Q9BW62 490 aa18.3■□□□□ 0.52
COX6A1-203ENST00000550009 RNPEPQ9H4A4 650 aa18.3■□□□□ 0.52
COX6A1-203ENST00000550009 TUT1Q9H6E5 874 aaKnown RBP18.3■□□□□ 0.52
COX6A1-203ENST00000550009 SETD4Q9NVD3 440 aa18.3■□□□□ 0.52
COX6A1-203ENST00000550009 NAP1L2Q9ULW6 460 aaPredicted RBP18.3■□□□□ 0.52
COX6A1-203ENST00000550009 ATG2AQ2TAZ0 1938 aa18.29■□□□□ 0.52
COX6A1-203ENST00000550009 NLRC5Q86WI3 1866 aa18.29■□□□□ 0.52
COX6A1-203ENST00000550009 GOLGA8AA7E2F4 631 aa18.29■□□□□ 0.52
COX6A1-203ENST00000550009 GOLGA8BA8MQT2 603 aa18.29■□□□□ 0.52
COX6A1-203ENST00000550009 STXBP3O00186 592 aa18.29■□□□□ 0.52
COX6A1-203ENST00000550009 HOXC8P31273 242 aa18.29■□□□□ 0.52
COX6A1-203ENST00000550009 RBL2Q08999 1139 aa18.29■□□□□ 0.52
COX6A1-203ENST00000550009 PTK7Q13308 1070 aa18.29■□□□□ 0.52
COX6A1-203ENST00000550009 RAB30Q15771 203 aa18.29■□□□□ 0.52
COX6A1-203ENST00000550009 PPP2R2DQ66LE6 453 aa18.29■□□□□ 0.52
COX6A1-203ENST00000550009 METTL7BQ6UX53 244 aa18.29■□□□□ 0.52
COX6A1-203ENST00000550009 Q6ZUG5 572 aa18.29■□□□□ 0.52
COX6A1-203ENST00000550009 CAGE1Q8TC20 777 aa18.29■□□□□ 0.52
COX6A1-203ENST00000550009 AFAP1L1Q8TED9 768 aa18.29■□□□□ 0.52
COX6A1-203ENST00000550009 MTIF3Q9H2K0 278 aaKnown RBP18.29■□□□□ 0.52
COX6A1-203ENST00000550009 PCDHA11Q9Y5I1 949 aa18.29■□□□□ 0.52
COX6A1-203ENST00000550009 UBIAD1Q9Y5Z9 338 aa18.29■□□□□ 0.52
COX6A1-203ENST00000550009 MYH9P35579 1960 aaKnown RBP18.29■□□□□ 0.52
COX6A1-203ENST00000550009 GSTTP1A0A1W2PQM5 241 aa18.28■□□□□ 0.52
COX6A1-203ENST00000550009 NOP56O00567 594 aaKnown RBP18.28■□□□□ 0.52
COX6A1-203ENST00000550009 PFKMP08237 780 aa18.28■□□□□ 0.52
COX6A1-203ENST00000550009 HSPA4P34932 840 aa18.28■□□□□ 0.52
COX6A1-203ENST00000550009 RFC2P35250 354 aa18.28■□□□□ 0.52
COX6A1-203ENST00000550009 WDR5P61964 334 aaKnown RBP18.28■□□□□ 0.52
COX6A1-203ENST00000550009 GNPTABQ3T906 1256 aa18.28■□□□□ 0.52
COX6A1-203ENST00000550009 SERINC5Q86VE9 423 aa18.28■□□□□ 0.52
COX6A1-203ENST00000550009 ATP6V0A1Q93050 837 aa18.28■□□□□ 0.52
COX6A1-203ENST00000550009 LARP6Q9BRS8 491 aaKnown RBP18.28■□□□□ 0.52
COX6A1-203ENST00000550009 SLC28A3Q9HAS3 691 aa18.28■□□□□ 0.52
COX6A1-203ENST00000550009 C17orf102A2RUQ5 167 aa18.27■□□□□ 0.52
COX6A1-203ENST00000550009 DTNBO60941 627 aa18.27■□□□□ 0.52
COX6A1-203ENST00000550009 CXCL10P02778 98 aa18.27■□□□□ 0.52
COX6A1-203ENST00000550009 CTSHP09668 335 aa18.27■□□□□ 0.52
COX6A1-203ENST00000550009 IGFBP4P22692 258 aa18.27■□□□□ 0.52
COX6A1-203ENST00000550009 MARK3P27448 753 aa18.27■□□□□ 0.52
COX6A1-203ENST00000550009 THPOP40225 353 aa18.27■□□□□ 0.52
COX6A1-203ENST00000550009 NAPAP54920 295 aa18.27■□□□□ 0.52
COX6A1-203ENST00000550009 NEDD9Q14511 834 aa18.27■□□□□ 0.52
COX6A1-203ENST00000550009 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.27■□□□□ 0.52
COX6A1-203ENST00000550009 RUFY4Q6ZNE9 571 aa18.27■□□□□ 0.52
COX6A1-203ENST00000550009 HERC6Q8IVU3 1022 aa18.27■□□□□ 0.52
COX6A1-203ENST00000550009 BRF1Q92994 677 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms