RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 AGBL1Q96MI9 1066 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 MTA3Q9BTC8 594 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 UNC93B1Q9H1C4 597 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 RANBP17Q9H2T7 1088 aaKnown RBP6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 HOMER2Q9NSB8 354 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 SIRPGQ9P1W8 387 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 PNMA2Q9UL42 364 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 CCPG1Q9ULG6 757 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 ZNF536O15090 1300 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 A0A0G2JMZ2 1700 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 FAM205CA6NFA0 338 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 DHX16O60231 1041 aaKnown RBP6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 COBLO75128 1261 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 GJB1P08034 283 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 ALAS1P13196 640 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 EN2P19622 333 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 HSPA4P34932 840 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 EIF1AXP47813 144 aaKnown RBP6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 RGS19P49795 217 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 RACK1P63244 317 aaKnown RBP6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 TRIM32Q13049 653 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 TKFCQ3LXA3 575 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 OLFML2BQ68BL8 750 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 NFXL1Q6ZNB6 911 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 ANKRD35Q8N283 1001 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 TMTC2Q8N394 836 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 NPLOC4Q8TAT6 608 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 IGDCC4Q8TDY8 1250 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 TMEM87BQ96K49 555 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 DEFB118Q96PH6 123 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 TRERF1Q96PN7 1200 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 NEK1Q96PY6 1258 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 ACAD9Q9H845 621 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 PRDM9Q9NQV7 894 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 RNF146Q9NTX7 359 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 FLRT1Q9NZU1 646 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 PCDHGB7Q9Y5F8 929 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 LAMA4Q16363 1823 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 RPTORQ8N122 1335 aa6.7□□□□□ -1.34
HMGB1P42-201ENST00000532126 CCDC69A6NI79 296 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 KLRF2D3W0D1 207 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 SH2B2O14492 632 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 GPR182O15218 404 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 FZD6O60353 706 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 LGR5O75473 907 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 SGPL1O95470 568 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 TFRCP02786 760 aaKnown RBP6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 CYP2C19P33261 490 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 MLLT1Q03111 559 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 CACNB2Q08289 660 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 TROAPQ12815 778 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 SERINC3Q13530 473 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 GRM4Q14833 912 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 ZNF792Q3KQV3 632 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 ADCK5Q3MIX3 580 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 MAP3K21Q5TCX8 1036 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 DHX32Q7L7V1 743 aaKnown RBP6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 ADGRF4Q8IZF3 695 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 CTCFLQ8NI51 663 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 U2AF1L4Q8WU68 220 aaKnown RBP6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 NUP133Q8WUM0 1156 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 GPRASP2Q96D09 838 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 MAML3Q96JK9 1138 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 SRPK1Q96SB4 655 aaKnown RBP6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 CEP89Q96ST8 783 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 CPVLQ9H3G5 476 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 LY9Q9HBG7 655 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 SENP2Q9HC62 589 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 VAT1LQ9HCJ6 419 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 SRA1Q9HD15 236 aaKnown RBP6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 PAK6Q9NQU5 681 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 RNF19AQ9NV58 838 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 STIM2Q9P246 746 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 GGT7Q9UJ14 662 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 DIS3Q9Y2L1 958 aaKnown RBP6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 RLFQ13129 1914 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 WDR19Q8NEZ3 1342 aa6.69□□□□□ -1.34
HMGB1P42-201ENST00000532126 MYH4Q9Y623 1939 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 DNAJC25-GNG10A0A024R161 153 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 EPB41L2O43491 1005 aaKnown RBP6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 HRO43593 1189 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 CREB3O43889 395 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 DDAH1O94760 285 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 IGHA2P01877 340 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 SSBP05455 408 aaKnown RBP eCLIP6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 CALM1P0DP23 149 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 CALM2P0DP24 149 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 CALM3P0DP25 149 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 TAL1P17542 331 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 CAPN2P17655 700 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 EIF4BP23588 611 aaKnown RBP6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 PSMA5P28066 241 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 CNGA1P29973 690 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 CCND3P30281 292 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 KIF5BP33176 963 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 LIFRP42702 1097 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 EXOSC10Q01780 885 aaKnown RBP6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 COL9A3Q14050 684 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 CDC37Q16543 378 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms