RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 BFSP2Q13515 415 aa18.53■□□□□ 0.56
HOXC4-203ENST00000507650 METTL7BQ6UX53 244 aa18.53■□□□□ 0.56
HOXC4-203ENST00000507650 LRRC8DQ7L1W4 858 aa18.53■□□□□ 0.56
HOXC4-203ENST00000507650 C7orf31Q8N865 590 aa18.53■□□□□ 0.56
HOXC4-203ENST00000507650 CAGE1Q8TC20 777 aa18.53■□□□□ 0.56
HOXC4-203ENST00000507650 AFAP1L1Q8TED9 768 aa18.53■□□□□ 0.56
HOXC4-203ENST00000507650 KATNAL1Q9BW62 490 aa18.53■□□□□ 0.56
HOXC4-203ENST00000507650 PRDM12Q9H4Q4 367 aa18.53■□□□□ 0.56
HOXC4-203ENST00000507650 MLXIPQ9HAP2 919 aa18.53■□□□□ 0.56
HOXC4-203ENST00000507650 NOD1Q9Y239 953 aa18.53■□□□□ 0.56
HOXC4-203ENST00000507650 SLC4A7Q9Y6M7 1214 aa18.53■□□□□ 0.56
HOXC4-203ENST00000507650 ZBBXA8MT70 800 aa18.52■□□□□ 0.56
HOXC4-203ENST00000507650 KCNA2P16389 499 aa18.52■□□□□ 0.56
HOXC4-203ENST00000507650 RTN1Q16799 776 aa18.52■□□□□ 0.56
HOXC4-203ENST00000507650 HEATR3Q7Z4Q2 680 aa18.52■□□□□ 0.56
HOXC4-203ENST00000507650 TMCO2Q7Z6W1 182 aaPredicted RBP18.52■□□□□ 0.56
HOXC4-203ENST00000507650 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.52■□□□□ 0.56
HOXC4-203ENST00000507650 PGBD1Q96JS3 809 aa18.52■□□□□ 0.56
HOXC4-203ENST00000507650 UBIAD1Q9Y5Z9 338 aa18.52■□□□□ 0.56
HOXC4-203ENST00000507650 KLF18A0A0U1RQI7 1052 aa18.51■□□□□ 0.55
HOXC4-203ENST00000507650 STXBP3O00186 592 aa18.51■□□□□ 0.55
HOXC4-203ENST00000507650 ZBTB43O43298 467 aa18.51■□□□□ 0.55
HOXC4-203ENST00000507650 CXCL10P02778 98 aa18.51■□□□□ 0.55
HOXC4-203ENST00000507650 SELPP16109 830 aa18.51■□□□□ 0.55
HOXC4-203ENST00000507650 ATP2A2P16615 1042 aaKnown RBP18.51■□□□□ 0.55
HOXC4-203ENST00000507650 PTK7Q13308 1070 aa18.51■□□□□ 0.55
HOXC4-203ENST00000507650 RAB30Q15771 203 aa18.51■□□□□ 0.55
HOXC4-203ENST00000507650 GNPTABQ3T906 1256 aa18.51■□□□□ 0.55
HOXC4-203ENST00000507650 ZNF618Q5T7W0 954 aa18.51■□□□□ 0.55
HOXC4-203ENST00000507650 SPRED2Q7Z698 418 aa18.51■□□□□ 0.55
HOXC4-203ENST00000507650 SERINC5Q86VE9 423 aa18.51■□□□□ 0.55
HOXC4-203ENST00000507650 RETREG2Q8NC44 543 aa18.51■□□□□ 0.55
HOXC4-203ENST00000507650 CUL5Q93034 780 aa18.51■□□□□ 0.55
HOXC4-203ENST00000507650 MTIF3Q9H2K0 278 aaKnown RBP18.51■□□□□ 0.55
HOXC4-203ENST00000507650 PCDHA6Q9UN73 950 aa18.51■□□□□ 0.55
HOXC4-203ENST00000507650 PCDHA8Q9Y5H6 950 aa18.51■□□□□ 0.55
HOXC4-203ENST00000507650 NID2Q14112 1375 aa18.51■□□□□ 0.55
HOXC4-203ENST00000507650 PRRC2BQ5JSZ5 2229 aaKnown RBP18.5■□□□□ 0.55
HOXC4-203ENST00000507650 H3BRB1 525 aa18.5■□□□□ 0.55
HOXC4-203ENST00000507650 SMIM10L2AP0DMW4 78 aa18.5■□□□□ 0.55
HOXC4-203ENST00000507650 SMIM10L2BP0DMW5 78 aa18.5■□□□□ 0.55
HOXC4-203ENST00000507650 APOBRQ0VD83 1088 aa18.5■□□□□ 0.55
HOXC4-203ENST00000507650 MKRN4PQ13434 485 aaPredicted RBP18.5■□□□□ 0.55
HOXC4-203ENST00000507650 XRRA1Q6P2D8 792 aa18.5■□□□□ 0.55
HOXC4-203ENST00000507650 CYP2W1Q8TAV3 490 aa18.5■□□□□ 0.55
HOXC4-203ENST00000507650 SENP7Q9BQF6 1050 aa18.5■□□□□ 0.55
HOXC4-203ENST00000507650 TUT1Q9H6E5 874 aaKnown RBP18.5■□□□□ 0.55
HOXC4-203ENST00000507650 RBM28Q9NW13 759 aaKnown RBP18.5■□□□□ 0.55
HOXC4-203ENST00000507650 PCDHA11Q9Y5I1 949 aa18.5■□□□□ 0.55
HOXC4-203ENST00000507650 V9GY48 417 aaPredicted RBP18.5■□□□□ 0.55
HOXC4-203ENST00000507650 XIRP2A4UGR9 3374 aa18.5■□□□□ 0.55
HOXC4-203ENST00000507650 ATG2AQ2TAZ0 1938 aa18.49■□□□□ 0.55
HOXC4-203ENST00000507650 MUC3AQ02505 3323 aa18.49■□□□□ 0.55
HOXC4-203ENST00000507650 EPOPA6NHQ4 379 aa18.49■□□□□ 0.55
HOXC4-203ENST00000507650 GOLGA8AA7E2F4 631 aa18.49■□□□□ 0.55
HOXC4-203ENST00000507650 GOLGA8BA8MQT2 603 aa18.49■□□□□ 0.55
HOXC4-203ENST00000507650 DLL1O00548 723 aa18.49■□□□□ 0.55
HOXC4-203ENST00000507650 TREHO43280 583 aa18.49■□□□□ 0.55
HOXC4-203ENST00000507650 ADD1P35611 737 aaKnown RBP18.49■□□□□ 0.55
HOXC4-203ENST00000507650 ADAM17P78536 824 aa18.49■□□□□ 0.55
HOXC4-203ENST00000507650 DEFB103AP81534 67 aa18.49■□□□□ 0.55
HOXC4-203ENST00000507650 SP4Q02446 784 aa18.49■□□□□ 0.55
HOXC4-203ENST00000507650 NEDD9Q14511 834 aa18.49■□□□□ 0.55
HOXC4-203ENST00000507650 KRT32Q14532 448 aa18.49■□□□□ 0.55
HOXC4-203ENST00000507650 Q6ZUG5 572 aa18.49■□□□□ 0.55
HOXC4-203ENST00000507650 GPRASP2Q96D09 838 aa18.49■□□□□ 0.55
HOXC4-203ENST00000507650 JAKMIP1Q96N16 626 aaKnown RBP18.49■□□□□ 0.55
HOXC4-203ENST00000507650 FTOQ9C0B1 505 aaKnown RBP eCLIP18.49■□□□□ 0.55
HOXC4-203ENST00000507650 RNPEPQ9H4A4 650 aa18.49■□□□□ 0.55
HOXC4-203ENST00000507650 PRDM6Q9NQX0 595 aa18.49■□□□□ 0.55
HOXC4-203ENST00000507650 TMEM260Q9NX78 707 aa18.49■□□□□ 0.55
HOXC4-203ENST00000507650 MSRAQ9UJ68 235 aa18.49■□□□□ 0.55
HOXC4-203ENST00000507650 NLRC5Q86WI3 1866 aa18.48■□□□□ 0.55
HOXC4-203ENST00000507650 GSTTP1A0A1W2PQM5 241 aa18.48■□□□□ 0.55
HOXC4-203ENST00000507650 CA3P07451 260 aa18.48■□□□□ 0.55
HOXC4-203ENST00000507650 CLK2P49760 499 aaKnown RBP18.48■□□□□ 0.55
HOXC4-203ENST00000507650 WDR5P61964 334 aaKnown RBP18.48■□□□□ 0.55
HOXC4-203ENST00000507650 CCDC155Q8N6L0 562 aa18.48■□□□□ 0.55
HOXC4-203ENST00000507650 AGXT2Q9BYV1 514 aa18.48■□□□□ 0.55
HOXC4-203ENST00000507650 RIC8AQ9NPQ8 531 aa18.48■□□□□ 0.55
HOXC4-203ENST00000507650 PKD2L1Q9P0L9 805 aa18.48■□□□□ 0.55
HOXC4-203ENST00000507650 NOP56O00567 594 aaKnown RBP18.47■□□□□ 0.55
HOXC4-203ENST00000507650 PKN1Q16512 942 aa18.47■□□□□ 0.55
HOXC4-203ENST00000507650 UTP14CQ5TAP6 766 aaKnown RBP18.47■□□□□ 0.55
HOXC4-203ENST00000507650 SYNE3Q6ZMZ3 975 aa18.47■□□□□ 0.55
HOXC4-203ENST00000507650 HERC6Q8IVU3 1022 aa18.47■□□□□ 0.55
HOXC4-203ENST00000507650 LMBR1Q8WVP7 490 aa18.47■□□□□ 0.55
HOXC4-203ENST00000507650 BRF1Q92994 677 aa18.47■□□□□ 0.55
HOXC4-203ENST00000507650 SLC9A7Q96T83 725 aa18.47■□□□□ 0.55
HOXC4-203ENST00000507650 COL25A1Q9BXS0 654 aaPredicted RBP18.47■□□□□ 0.55
HOXC4-203ENST00000507650 SLC28A3Q9HAS3 691 aa18.47■□□□□ 0.55
HOXC4-203ENST00000507650 JADE2Q9NQC1 790 aa18.47■□□□□ 0.55
HOXC4-203ENST00000507650 SETD4Q9NVD3 440 aa18.47■□□□□ 0.55
HOXC4-203ENST00000507650 BARHL2Q9NY43 387 aa18.47■□□□□ 0.55
HOXC4-203ENST00000507650 MYH9P35579 1960 aaKnown RBP18.46■□□□□ 0.55
HOXC4-203ENST00000507650 C17orf102A2RUQ5 167 aa18.46■□□□□ 0.55
HOXC4-203ENST00000507650 LCHNA4D1U4 455 aa18.46■□□□□ 0.55
HOXC4-203ENST00000507650 RFXAPO00287 272 aa18.46■□□□□ 0.55
HOXC4-203ENST00000507650 BAIAP3O94812 1187 aa18.46■□□□□ 0.55
HOXC4-203ENST00000507650 ACTN1P12814 892 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms