RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 SMIM10L2BP0DMW5 78 aa28.25■■■□□ 2.11
PMS1-214ENST00000446877 GNAT1P11488 350 aa28.25■■■□□ 2.11
PMS1-214ENST00000446877 GNPTABQ3T906 1256 aa28.25■■■□□ 2.11
PMS1-214ENST00000446877 ZFP91Q96JP5 570 aaPredicted RBP28.25■■■□□ 2.11
PMS1-214ENST00000446877 PTPRSQ13332 1948 aa28.24■■■□□ 2.11
PMS1-214ENST00000446877 KIAA1217Q5T5P2 1943 aa28.24■■■□□ 2.11
PMS1-214ENST00000446877 COL4A4P53420 1690 aaPredicted RBP28.24■■■□□ 2.11
PMS1-214ENST00000446877 PALM3A6NDB9 673 aaPredicted RBP28.24■■■□□ 2.11
PMS1-214ENST00000446877 CAND2O75155 1236 aa28.24■■■□□ 2.11
PMS1-214ENST00000446877 UPP2O95045 317 aa28.24■■■□□ 2.11
PMS1-214ENST00000446877 MKRN4PQ13434 485 aaPredicted RBP28.24■■■□□ 2.11
PMS1-214ENST00000446877 TIGD5Q53EQ6 642 aa28.24■■■□□ 2.11
PMS1-214ENST00000446877 USP26Q9BXU7 913 aa28.24■■■□□ 2.11
PMS1-214ENST00000446877 RNPEPQ9H4A4 650 aa28.24■■■□□ 2.11
PMS1-214ENST00000446877 RBAK-RBAKDNI3L0D1 243 aa28.23■■■□□ 2.11
PMS1-214ENST00000446877 TREHO43280 583 aa28.23■■■□□ 2.11
PMS1-214ENST00000446877 LGALS2P05162 132 aa28.23■■■□□ 2.11
PMS1-214ENST00000446877 CTSHP09668 335 aa28.23■■■□□ 2.11
PMS1-214ENST00000446877 TRDNQ13061 729 aa28.23■■■□□ 2.11
PMS1-214ENST00000446877 GPM6BQ13491 265 aa28.23■■■□□ 2.11
PMS1-214ENST00000446877 SEC23AQ15436 765 aa28.23■■■□□ 2.11
PMS1-214ENST00000446877 BANK1Q8NDB2 785 aa28.23■■■□□ 2.11
PMS1-214ENST00000446877 GPKOWQ92917 476 aaPredicted RBP eCLIP28.23■■■□□ 2.11
PMS1-214ENST00000446877 TOP1MTQ969P6 601 aa28.23■■■□□ 2.11
PMS1-214ENST00000446877 GRXCR2A6NFK2 248 aa28.22■■■□□ 2.11
PMS1-214ENST00000446877 ALADP13716 330 aa28.22■■■□□ 2.11
PMS1-214ENST00000446877 IL9P15248 144 aa28.22■■■□□ 2.11
PMS1-214ENST00000446877 NUCB1Q02818 461 aa28.22■■■□□ 2.11
PMS1-214ENST00000446877 NEDD9Q14511 834 aa28.22■■■□□ 2.11
PMS1-214ENST00000446877 PIGSQ96S52 555 aa28.22■■■□□ 2.11
PMS1-214ENST00000446877 H3BNC9 293 aa28.21■■■□□ 2.11
PMS1-214ENST00000446877 HOXC8P31273 242 aa28.21■■■□□ 2.11
PMS1-214ENST00000446877 EP400NLQ6ZTU2 488 aa28.21■■■□□ 2.11
PMS1-214ENST00000446877 TMEM192Q8IY95 271 aa28.21■■■□□ 2.11
PMS1-214ENST00000446877 FAM50BQ9Y247 325 aa28.21■■■□□ 2.11
PMS1-214ENST00000446877 STAM2O75886 525 aa28.2■■■□□ 2.1
PMS1-214ENST00000446877 METTL7BQ6UX53 244 aa28.2■■■□□ 2.1
PMS1-214ENST00000446877 CYB5R4Q7L1T6 521 aa28.2■■■□□ 2.1
PMS1-214ENST00000446877 NEK9Q8TD19 979 aa28.2■■■□□ 2.1
PMS1-214ENST00000446877 APBB2Q92870 758 aa28.2■■■□□ 2.1
PMS1-214ENST00000446877 IFIH1Q9BYX4 1025 aaKnown RBP28.2■■■□□ 2.1
PMS1-214ENST00000446877 RIOX1Q9H6W3 641 aa28.2■■■□□ 2.1
PMS1-214ENST00000446877 SETD4Q9NVD3 440 aa28.2■■■□□ 2.1
PMS1-214ENST00000446877 ZNF215Q9UL58 517 aaPredicted RBP28.2■■■□□ 2.1
PMS1-214ENST00000446877 PNMA6FA0A0J9YX94 578 aa28.19■■■□□ 2.1
PMS1-214ENST00000446877 ERICH2A1L162 156 aa28.19■■■□□ 2.1
PMS1-214ENST00000446877 PRR33A8MZF0 331 aa28.19■■■□□ 2.1
PMS1-214ENST00000446877 H3BQ06 376 aaPredicted RBP28.19■■■□□ 2.1
PMS1-214ENST00000446877 GRM4Q14833 912 aa28.19■■■□□ 2.1
PMS1-214ENST00000446877 CYFIP1Q7L576 1253 aa28.19■■■□□ 2.1
PMS1-214ENST00000446877 BCAS3Q9H6U6 928 aa28.19■■■□□ 2.1
PMS1-214ENST00000446877 SPATA31C2B4DYI2 1134 aa28.18■■■□□ 2.1
PMS1-214ENST00000446877 IFIT3O14879 490 aaKnown RBP28.18■■■□□ 2.1
PMS1-214ENST00000446877 ICAM3P32942 547 aa28.18■■■□□ 2.1
PMS1-214ENST00000446877 UIMC1Q96RL1 719 aa28.18■■■□□ 2.1
PMS1-214ENST00000446877 FIBPO43427 364 aa28.17■■■□□ 2.1
PMS1-214ENST00000446877 CSPP1Q1MSJ5 1256 aa28.17■■■□□ 2.1
PMS1-214ENST00000446877 TCEAL5Q5H9L2 206 aa28.17■■■□□ 2.1
PMS1-214ENST00000446877 PABPC5Q96DU9 382 aaKnown RBP28.17■■■□□ 2.1
PMS1-214ENST00000446877 IL17RAQ96F46 866 aa28.17■■■□□ 2.1
PMS1-214ENST00000446877 INPP4AQ96PE3 977 aaPredicted RBP28.17■■■□□ 2.1
PMS1-214ENST00000446877 GPR20Q99678 358 aa28.17■■■□□ 2.1
PMS1-214ENST00000446877 NSUN3Q9H649 340 aaKnown RBP28.17■■■□□ 2.1
PMS1-214ENST00000446877 RTEL1Q9NZ71 1219 aa28.17■■■□□ 2.1
PMS1-214ENST00000446877 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.16■■■□□ 2.1
PMS1-214ENST00000446877 MRPS9P82933 396 aaKnown RBP28.16■■■□□ 2.1
PMS1-214ENST00000446877 ARHGAP4P98171 946 aa28.16■■■□□ 2.1
PMS1-214ENST00000446877 UTP14CQ5TAP6 766 aaKnown RBP28.16■■■□□ 2.1
PMS1-214ENST00000446877 SART3Q15020 963 aaKnown RBP28.15■■■□□ 2.1
PMS1-214ENST00000446877 SLC35G1Q2M3R5 365 aa28.15■■■□□ 2.1
PMS1-214ENST00000446877 FIBCD1Q8N539 461 aa28.15■■■□□ 2.1
PMS1-214ENST00000446877 OSBPL7Q9BZF2 842 aa28.15■■■□□ 2.1
PMS1-214ENST00000446877 U3KPZ7 1027 aaPredicted RBP28.15■■■□□ 2.1
PMS1-214ENST00000446877 SIP14410 1827 aa28.15■■■□□ 2.1
PMS1-214ENST00000446877 LAMA4Q16363 1823 aa28.15■■■□□ 2.1
PMS1-214ENST00000446877 MYH7BA7E2Y1 1941 aa28.14■■■□□ 2.1
PMS1-214ENST00000446877 MYH6P13533 1939 aa28.14■■■□□ 2.1
PMS1-214ENST00000446877 NCK2O43639 380 aa28.14■■■□□ 2.1
PMS1-214ENST00000446877 CYTH3O43739 400 aa28.14■■■□□ 2.1
PMS1-214ENST00000446877 IGHDP01880 384 aa28.14■■■□□ 2.1
PMS1-214ENST00000446877 SP4Q02446 784 aa28.13■■■□□ 2.09
PMS1-214ENST00000446877 WTAPQ15007 396 aa28.13■■■□□ 2.09
PMS1-214ENST00000446877 FAM26DQ5JW98 314 aa28.13■■■□□ 2.09
PMS1-214ENST00000446877 CATIPQ7Z7H3 387 aa28.13■■■□□ 2.09
PMS1-214ENST00000446877 RALYLQ86SE5 291 aaKnown RBP28.13■■■□□ 2.09
PMS1-214ENST00000446877 TRIM50Q86XT4 487 aa28.13■■■□□ 2.09
PMS1-214ENST00000446877 PIBF1Q8WXW3 757 aa28.13■■■□□ 2.09
PMS1-214ENST00000446877 CUL5Q93034 780 aa28.13■■■□□ 2.09
PMS1-214ENST00000446877 CLDND1Q9NY35 253 aa28.13■■■□□ 2.09
PMS1-214ENST00000446877 PIEZO1Q92508 2521 aa28.13■■■□□ 2.09
PMS1-214ENST00000446877 DCXO43602 365 aa28.12■■■□□ 2.09
PMS1-214ENST00000446877 RB1P06400 928 aa28.12■■■□□ 2.09
PMS1-214ENST00000446877 CTNNB1P35222 781 aa28.12■■■□□ 2.09
PMS1-214ENST00000446877 XRRA1Q6P2D8 792 aa28.12■■■□□ 2.09
PMS1-214ENST00000446877 GIMAP8Q8ND71 665 aaPredicted RBP28.12■■■□□ 2.09
PMS1-214ENST00000446877 SMARCC2Q8TAQ2 1214 aa28.12■■■□□ 2.09
PMS1-214ENST00000446877 LMBR1Q8WVP7 490 aa28.12■■■□□ 2.09
PMS1-214ENST00000446877 SENP7Q9BQF6 1050 aa28.12■■■□□ 2.09
PMS1-214ENST00000446877 PRKAG3Q9UGI9 489 aa28.12■■■□□ 2.09
PMS1-214ENST00000446877 FRMPD4Q14CM0 1322 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms