RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 ADAMTS3O15072 1205 aa19.44■□□□□ 0.7
UBE3D-204ENST00000430071 IQCF3P0C7M6 154 aa19.44■□□□□ 0.7
UBE3D-204ENST00000430071 TGFB3P10600 412 aa19.44■□□□□ 0.7
UBE3D-204ENST00000430071 GRIN2CQ14957 1233 aa19.44■□□□□ 0.7
UBE3D-204ENST00000430071 RABEP1Q15276 862 aa19.44■□□□□ 0.7
UBE3D-204ENST00000430071 RTN1Q16799 776 aa19.44■□□□□ 0.7
UBE3D-204ENST00000430071 PCNX4Q63HM2 1172 aa19.44■□□□□ 0.7
UBE3D-204ENST00000430071 KCNV1Q6PIU1 500 aa19.44■□□□□ 0.7
UBE3D-204ENST00000430071 CYFIP1Q7L576 1253 aa19.44■□□□□ 0.7
UBE3D-204ENST00000430071 SESTD1Q86VW0 696 aa19.44■□□□□ 0.7
UBE3D-204ENST00000430071 CUL5Q93034 780 aa19.44■□□□□ 0.7
UBE3D-204ENST00000430071 PGBD1Q96JS3 809 aa19.44■□□□□ 0.7
UBE3D-204ENST00000430071 MLXIPQ9HAP2 919 aa19.44■□□□□ 0.7
UBE3D-204ENST00000430071 GTF2IRD1Q9UHL9 959 aa19.44■□□□□ 0.7
UBE3D-204ENST00000430071 TPCN1Q9ULQ1 816 aa19.44■□□□□ 0.7
UBE3D-204ENST00000430071 V9GY48 417 aaPredicted RBP19.44■□□□□ 0.7
UBE3D-204ENST00000430071 MICAL3Q7RTP6 2002 aa19.44■□□□□ 0.7
UBE3D-204ENST00000430071 ATP9AO75110 1047 aa19.44■□□□□ 0.7
UBE3D-204ENST00000430071 PPFIA4O75335 1185 aa19.44■□□□□ 0.7
UBE3D-204ENST00000430071 ADD1P35611 737 aaKnown RBP19.44■□□□□ 0.7
UBE3D-204ENST00000430071 METAP2P50579 478 aaKnown RBP eCLIP19.44■□□□□ 0.7
UBE3D-204ENST00000430071 RABGGTBP53611 331 aa19.44■□□□□ 0.7
UBE3D-204ENST00000430071 ZNF274Q96GC6 653 aaPredicted RBP19.44■□□□□ 0.7
UBE3D-204ENST00000430071 YBX2Q9Y2T7 364 aaKnown RBP19.44■□□□□ 0.7
UBE3D-204ENST00000430071 NID2Q14112 1375 aa19.43■□□□□ 0.7
UBE3D-204ENST00000430071 REV3LO60673 3130 aa19.43■□□□□ 0.7
UBE3D-204ENST00000430071 EVPLQ92817 2033 aa19.43■□□□□ 0.7
UBE3D-204ENST00000430071 SIP14410 1827 aa19.43■□□□□ 0.7
UBE3D-204ENST00000430071 MYOGP15173 224 aa19.43■□□□□ 0.7
UBE3D-204ENST00000430071 ANKRD1Q15327 319 aa19.43■□□□□ 0.7
UBE3D-204ENST00000430071 TCTN1Q2MV58 587 aa19.43■□□□□ 0.7
UBE3D-204ENST00000430071 TRIM50Q86XT4 487 aa19.43■□□□□ 0.7
UBE3D-204ENST00000430071 SLC17A8Q8NDX2 589 aa19.43■□□□□ 0.7
UBE3D-204ENST00000430071 NCOA5Q9HCD5 579 aaKnown RBP19.43■□□□□ 0.7
UBE3D-204ENST00000430071 PCDHA6Q9UN73 950 aa19.43■□□□□ 0.7
UBE3D-204ENST00000430071 NOD1Q9Y239 953 aa19.43■□□□□ 0.7
UBE3D-204ENST00000430071 PCDHA8Q9Y5H6 950 aa19.43■□□□□ 0.7
UBE3D-204ENST00000430071 MYH9P35579 1960 aaKnown RBP19.43■□□□□ 0.7
UBE3D-204ENST00000430071 PPFIA3O75145 1194 aa19.42■□□□□ 0.7
UBE3D-204ENST00000430071 LGALS2P05162 132 aa19.42■□□□□ 0.7
UBE3D-204ENST00000430071 ITGB5P18084 799 aa19.42■□□□□ 0.7
UBE3D-204ENST00000430071 CCT2P78371 535 aaKnown RBP19.42■□□□□ 0.7
UBE3D-204ENST00000430071 SP4Q02446 784 aa19.42■□□□□ 0.7
UBE3D-204ENST00000430071 TRIM71Q2Q1W2 868 aaKnown RBP19.42■□□□□ 0.7
UBE3D-204ENST00000430071 RPUSD2Q8IZ73 545 aaKnown RBP19.42■□□□□ 0.7
UBE3D-204ENST00000430071 C7orf31Q8N865 590 aa19.42■□□□□ 0.7
UBE3D-204ENST00000430071 TIFAQ96CG3 184 aa19.42■□□□□ 0.7
UBE3D-204ENST00000430071 RBM28Q9NW13 759 aaKnown RBP19.42■□□□□ 0.7
UBE3D-204ENST00000430071 CUL9Q8IWT3 2517 aa19.41■□□□□ 0.7
UBE3D-204ENST00000430071 ZBBXA8MT70 800 aa19.41■□□□□ 0.7
UBE3D-204ENST00000430071 STXBP3O00186 592 aa19.41■□□□□ 0.7
UBE3D-204ENST00000430071 PITPNM1O00562 1244 aa19.41■□□□□ 0.7
UBE3D-204ENST00000430071 FIBPO43427 364 aa19.41■□□□□ 0.7
UBE3D-204ENST00000430071 STAM2O75886 525 aa19.41■□□□□ 0.7
UBE3D-204ENST00000430071 LARGE1O95461 756 aa19.41■□□□□ 0.7
UBE3D-204ENST00000430071 STK3Q13188 491 aa19.41■□□□□ 0.7
UBE3D-204ENST00000430071 GNPTABQ3T906 1256 aa19.41■□□□□ 0.7
UBE3D-204ENST00000430071 GPR20Q99678 358 aa19.41■□□□□ 0.7
UBE3D-204ENST00000430071 NKX2-4Q9H2Z4 354 aa19.41■□□□□ 0.7
UBE3D-204ENST00000430071 ZNF576Q9H609 170 aa19.41■□□□□ 0.7
UBE3D-204ENST00000430071 TMEM260Q9NX78 707 aa19.41■□□□□ 0.7
UBE3D-204ENST00000430071 PKD2L1Q9P0L9 805 aa19.41■□□□□ 0.7
UBE3D-204ENST00000430071 TRANK1O15050 2925 aa19.4■□□□□ 0.7
UBE3D-204ENST00000430071 PRRC2BQ5JSZ5 2229 aaKnown RBP19.4■□□□□ 0.7
UBE3D-204ENST00000430071 CKBP12277 381 aa19.4■□□□□ 0.7
UBE3D-204ENST00000430071 KCNA2P16389 499 aa19.4■□□□□ 0.7
UBE3D-204ENST00000430071 NAPAP54920 295 aa19.4■□□□□ 0.7
UBE3D-204ENST00000430071 BFSP2Q13515 415 aa19.4■□□□□ 0.7
UBE3D-204ENST00000430071 TRAF7Q6Q0C0 670 aa19.4■□□□□ 0.7
UBE3D-204ENST00000430071 METTL7BQ6UX53 244 aa19.4■□□□□ 0.7
UBE3D-204ENST00000430071 RETREG2Q8NC44 543 aa19.4■□□□□ 0.7
UBE3D-204ENST00000430071 CYP2W1Q8TAV3 490 aa19.4■□□□□ 0.7
UBE3D-204ENST00000430071 OSBPL7Q9BZF2 842 aa19.4■□□□□ 0.7
UBE3D-204ENST00000430071 UBIAD1Q9Y5Z9 338 aa19.4■□□□□ 0.7
UBE3D-204ENST00000430071 H3BRB1 525 aa19.39■□□□□ 0.69
UBE3D-204ENST00000430071 CD2BP2O95400 341 aaKnown RBP19.39■□□□□ 0.69
UBE3D-204ENST00000430071 NEDD9Q14511 834 aa19.39■□□□□ 0.69
UBE3D-204ENST00000430071 MBTPS1Q14703 1052 aa19.39■□□□□ 0.69
UBE3D-204ENST00000430071 ME3Q16798 604 aa19.39■□□□□ 0.69
UBE3D-204ENST00000430071 UTP14CQ5TAP6 766 aaKnown RBP19.39■□□□□ 0.69
UBE3D-204ENST00000430071 KATNAL1Q9BW62 490 aa19.39■□□□□ 0.69
UBE3D-204ENST00000430071 TUT1Q9H6E5 874 aaKnown RBP19.39■□□□□ 0.69
UBE3D-204ENST00000430071 SLC4A7Q9Y6M7 1214 aa19.39■□□□□ 0.69
UBE3D-204ENST00000430071 CCDC196A0A1B0GTZ2 297 aa19.38■□□□□ 0.69
UBE3D-204ENST00000430071 PFKFB2O60825 505 aa19.38■□□□□ 0.69
UBE3D-204ENST00000430071 NBNO60934 754 aa19.38■□□□□ 0.69
UBE3D-204ENST00000430071 NTRK3Q16288 839 aa19.38■□□□□ 0.69
UBE3D-204ENST00000430071 PKN1Q16512 942 aa19.38■□□□□ 0.69
UBE3D-204ENST00000430071 ZNF618Q5T7W0 954 aa19.38■□□□□ 0.69
UBE3D-204ENST00000430071 XRRA1Q6P2D8 792 aa19.38■□□□□ 0.69
UBE3D-204ENST00000430071 CAGE1Q8TC20 777 aa19.38■□□□□ 0.69
UBE3D-204ENST00000430071 FTOQ9C0B1 505 aaKnown RBP eCLIP19.38■□□□□ 0.69
UBE3D-204ENST00000430071 RNPEPQ9H4A4 650 aa19.38■□□□□ 0.69
UBE3D-204ENST00000430071 RIC8AQ9NPQ8 531 aa19.38■□□□□ 0.69
UBE3D-204ENST00000430071 TMEM265A0A087WTH1 108 aa19.37■□□□□ 0.69
UBE3D-204ENST00000430071 GSTTP1A0A1W2PQM5 241 aa19.37■□□□□ 0.69
UBE3D-204ENST00000430071 SMCO2A6NFE2 343 aa19.37■□□□□ 0.69
UBE3D-204ENST00000430071 SPDYE3A6NKU9 549 aa19.37■□□□□ 0.69
UBE3D-204ENST00000430071 NOP56O00567 594 aaKnown RBP19.37■□□□□ 0.69
UBE3D-204ENST00000430071 TREHO43280 583 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms