RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 CAGE1Q8TC20 777 aa17.39■□□□□ 0.37
UBXN4-203ENST00000416538 AFAP1L1Q8TED9 768 aa17.39■□□□□ 0.37
UBXN4-203ENST00000416538 CCDC136Q96JN2 1154 aa17.39■□□□□ 0.37
UBXN4-203ENST00000416538 KATNAL1Q9BW62 490 aa17.39■□□□□ 0.37
UBXN4-203ENST00000416538 MTIF3Q9H2K0 278 aaKnown RBP17.39■□□□□ 0.37
UBXN4-203ENST00000416538 PRDM12Q9H4Q4 367 aa17.39■□□□□ 0.37
UBXN4-203ENST00000416538 SLC4A7Q9Y6M7 1214 aa17.39■□□□□ 0.37
UBXN4-203ENST00000416538 A0A0C4DFX4 3053 aa17.39■□□□□ 0.37
UBXN4-203ENST00000416538 PRRC2BQ5JSZ5 2229 aaKnown RBP17.39■□□□□ 0.37
UBXN4-203ENST00000416538 FIBPO43427 364 aa17.38■□□□□ 0.37
UBXN4-203ENST00000416538 PPFIA4O75335 1185 aa17.38■□□□□ 0.37
UBXN4-203ENST00000416538 STAM2O75886 525 aa17.38■□□□□ 0.37
UBXN4-203ENST00000416538 CKBP12277 381 aa17.38■□□□□ 0.37
UBXN4-203ENST00000416538 RFC2P35250 354 aa17.38■□□□□ 0.37
UBXN4-203ENST00000416538 RAB30Q15771 203 aa17.38■□□□□ 0.37
UBXN4-203ENST00000416538 GNPTABQ3T906 1256 aa17.38■□□□□ 0.37
UBXN4-203ENST00000416538 METTL7BQ6UX53 244 aa17.38■□□□□ 0.37
UBXN4-203ENST00000416538 CYFIP1Q7L576 1253 aa17.38■□□□□ 0.37
UBXN4-203ENST00000416538 HEATR3Q7Z4Q2 680 aa17.38■□□□□ 0.37
UBXN4-203ENST00000416538 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.38■□□□□ 0.37
UBXN4-203ENST00000416538 GPR20Q99678 358 aa17.38■□□□□ 0.37
UBXN4-203ENST00000416538 PSTPIP2Q9H939 334 aa17.38■□□□□ 0.37
UBXN4-203ENST00000416538 MLXIPQ9HAP2 919 aa17.38■□□□□ 0.37
UBXN4-203ENST00000416538 KLF18A0A0U1RQI7 1052 aa17.37■□□□□ 0.37
UBXN4-203ENST00000416538 ATP9AO75110 1047 aa17.37■□□□□ 0.37
UBXN4-203ENST00000416538 SELPP16109 830 aa17.37■□□□□ 0.37
UBXN4-203ENST00000416538 KCNA2P16389 499 aa17.37■□□□□ 0.37
UBXN4-203ENST00000416538 ATP2A2P16615 1042 aaKnown RBP17.37■□□□□ 0.37
UBXN4-203ENST00000416538 ITGB5P18084 799 aa17.37■□□□□ 0.37
UBXN4-203ENST00000416538 RTN1Q16799 776 aa17.37■□□□□ 0.37
UBXN4-203ENST00000416538 SPRED2Q7Z698 418 aa17.37■□□□□ 0.37
UBXN4-203ENST00000416538 TMCO2Q7Z6W1 182 aaPredicted RBP17.37■□□□□ 0.37
UBXN4-203ENST00000416538 RETREG2Q8NC44 543 aa17.37■□□□□ 0.37
UBXN4-203ENST00000416538 CUL5Q93034 780 aa17.37■□□□□ 0.37
UBXN4-203ENST00000416538 PGBD1Q96JS3 809 aa17.37■□□□□ 0.37
UBXN4-203ENST00000416538 SNX14Q9Y5W7 946 aa17.37■□□□□ 0.37
UBXN4-203ENST00000416538 VCANP13611 3396 aa17.36■□□□□ 0.37
UBXN4-203ENST00000416538 GOLGA8AA7E2F4 631 aa17.36■□□□□ 0.37
UBXN4-203ENST00000416538 GOLGA8BA8MQT2 603 aa17.36■□□□□ 0.37
UBXN4-203ENST00000416538 ADAMTS3O15072 1205 aa17.36■□□□□ 0.37
UBXN4-203ENST00000416538 ZBTB43O43298 467 aa17.36■□□□□ 0.37
UBXN4-203ENST00000416538 CXCL10P02778 98 aa17.36■□□□□ 0.37
UBXN4-203ENST00000416538 SMIM10L2AP0DMW4 78 aa17.36■□□□□ 0.37
UBXN4-203ENST00000416538 SMIM10L2BP0DMW5 78 aa17.36■□□□□ 0.37
UBXN4-203ENST00000416538 HSPA4P34932 840 aa17.36■□□□□ 0.37
UBXN4-203ENST00000416538 SP4Q02446 784 aa17.36■□□□□ 0.37
UBXN4-203ENST00000416538 PTK7Q13308 1070 aa17.36■□□□□ 0.37
UBXN4-203ENST00000416538 ZNF618Q5T7W0 954 aa17.36■□□□□ 0.37
UBXN4-203ENST00000416538 OSBPL7Q9BZF2 842 aa17.36■□□□□ 0.37
UBXN4-203ENST00000416538 MSRAQ9UJ68 235 aa17.36■□□□□ 0.37
UBXN4-203ENST00000416538 UBIAD1Q9Y5Z9 338 aa17.36■□□□□ 0.37
UBXN4-203ENST00000416538 NID2Q14112 1375 aa17.36■□□□□ 0.37
UBXN4-203ENST00000416538 REV3LO60673 3130 aa17.36■□□□□ 0.37
UBXN4-203ENST00000416538 NLRC5Q86WI3 1866 aa17.35■□□□□ 0.37
UBXN4-203ENST00000416538 ATG2AQ2TAZ0 1938 aa17.35■□□□□ 0.37
UBXN4-203ENST00000416538 H3BRB1 525 aa17.35■□□□□ 0.37
UBXN4-203ENST00000416538 STXBP3O00186 592 aa17.35■□□□□ 0.37
UBXN4-203ENST00000416538 DLL1O00548 723 aa17.35■□□□□ 0.37
UBXN4-203ENST00000416538 DEFB103AP81534 67 aa17.35■□□□□ 0.37
UBXN4-203ENST00000416538 APOBRQ0VD83 1088 aa17.35■□□□□ 0.37
UBXN4-203ENST00000416538 NEDD9Q14511 834 aa17.35■□□□□ 0.37
UBXN4-203ENST00000416538 SERINC5Q86VE9 423 aa17.35■□□□□ 0.37
UBXN4-203ENST00000416538 CCDC155Q8N6L0 562 aa17.35■□□□□ 0.37
UBXN4-203ENST00000416538 FTOQ9C0B1 505 aaKnown RBP eCLIP17.35■□□□□ 0.37
UBXN4-203ENST00000416538 TUT1Q9H6E5 874 aaKnown RBP17.35■□□□□ 0.37
UBXN4-203ENST00000416538 RBM28Q9NW13 759 aaKnown RBP17.35■□□□□ 0.37
UBXN4-203ENST00000416538 PKD2L1Q9P0L9 805 aa17.35■□□□□ 0.37
UBXN4-203ENST00000416538 PCDHA6Q9UN73 950 aa17.35■□□□□ 0.37
UBXN4-203ENST00000416538 PCDHA8Q9Y5H6 950 aa17.35■□□□□ 0.37
UBXN4-203ENST00000416538 PCDHA11Q9Y5I1 949 aa17.35■□□□□ 0.37
UBXN4-203ENST00000416538 TRANK1O15050 2925 aa17.34■□□□□ 0.37
UBXN4-203ENST00000416538 EPOPA6NHQ4 379 aa17.34■□□□□ 0.37
UBXN4-203ENST00000416538 NOP56O00567 594 aaKnown RBP17.34■□□□□ 0.37
UBXN4-203ENST00000416538 TREHO43280 583 aa17.34■□□□□ 0.37
UBXN4-203ENST00000416538 CA3P07451 260 aa17.34■□□□□ 0.37
UBXN4-203ENST00000416538 WDR5P61964 334 aaKnown RBP17.34■□□□□ 0.37
UBXN4-203ENST00000416538 KRT32Q14532 448 aa17.34■□□□□ 0.37
UBXN4-203ENST00000416538 XRRA1Q6P2D8 792 aa17.34■□□□□ 0.37
UBXN4-203ENST00000416538 TTC28Q96AY4 2481 aa17.34■□□□□ 0.37
UBXN4-203ENST00000416538 GPRASP2Q96D09 838 aa17.34■□□□□ 0.37
UBXN4-203ENST00000416538 JAKMIP1Q96N16 626 aaKnown RBP17.34■□□□□ 0.37
UBXN4-203ENST00000416538 SLC9A7Q96T83 725 aa17.34■□□□□ 0.37
UBXN4-203ENST00000416538 SENP7Q9BQF6 1050 aa17.34■□□□□ 0.37
UBXN4-203ENST00000416538 RNPEPQ9H4A4 650 aa17.34■□□□□ 0.37
UBXN4-203ENST00000416538 PRDM6Q9NQX0 595 aa17.34■□□□□ 0.37
UBXN4-203ENST00000416538 ACTN1P12814 892 aa17.33■□□□□ 0.36
UBXN4-203ENST00000416538 NAPAP54920 295 aa17.33■□□□□ 0.36
UBXN4-203ENST00000416538 ADAM17P78536 824 aa17.33■□□□□ 0.36
UBXN4-203ENST00000416538 UTP14CQ5TAP6 766 aaKnown RBP17.33■□□□□ 0.36
UBXN4-203ENST00000416538 PPP2R2DQ66LE6 453 aa17.33■□□□□ 0.36
UBXN4-203ENST00000416538 SYNE3Q6ZMZ3 975 aa17.33■□□□□ 0.36
UBXN4-203ENST00000416538 Q6ZUG5 572 aa17.33■□□□□ 0.36
UBXN4-203ENST00000416538 HERC6Q8IVU3 1022 aa17.33■□□□□ 0.36
UBXN4-203ENST00000416538 CYP2W1Q8TAV3 490 aa17.33■□□□□ 0.36
UBXN4-203ENST00000416538 LMBR1Q8WVP7 490 aa17.33■□□□□ 0.36
UBXN4-203ENST00000416538 COL25A1Q9BXS0 654 aaPredicted RBP17.33■□□□□ 0.36
UBXN4-203ENST00000416538 SLC28A3Q9HAS3 691 aa17.33■□□□□ 0.36
UBXN4-203ENST00000416538 TMEM260Q9NX78 707 aa17.33■□□□□ 0.36
UBXN4-203ENST00000416538 V9GY48 417 aaPredicted RBP17.33■□□□□ 0.36
UBXN4-203ENST00000416538 BRWD1Q9NSI6 2320 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 548 ms