RNA–Protein interactions for RNA: snR57

snR57, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR57, Length 88 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR57	snR57	RPS0B	P46654	252 aa	Known RBP	4.67	□□□□□ -1.66
snR57	snR57	YIP1	P53039	248 aa		4.67	□□□□□ -1.66
snR57	snR57	POP6	P53218	158 aa		4.67	□□□□□ -1.66
snR57	snR57	ART5	P53244	586 aa	Known RBP	4.67	□□□□□ -1.66
snR57	snR57	CAF40	P53829	373 aa		4.67	□□□□□ -1.66
snR57	snR57	WSC2	P53832	503 aa		4.67	□□□□□ -1.66
snR57	snR57	RMT2	Q03305	412 aa		4.67	□□□□□ -1.66
snR57	snR57	ERB1	Q04660	807 aa	Known RBP	4.67	□□□□□ -1.66
snR57	snR57	HIS4	P00815	799 aa	Known RBP	4.66	□□□□□ -1.66
snR57	snR57	HIR2	P32480	875 aa		4.66	□□□□□ -1.66
snR57	snR57	YJL132W	P47014	750 aa		4.66	□□□□□ -1.66
snR57	snR57	YJR011C	P47086	261 aa	Predicted RBP	4.66	□□□□□ -1.66
snR57	snR57	ECM27	P47144	725 aa		4.66	□□□□□ -1.66
snR57	snR57	MSO1	P53604	210 aa	Known RBP	4.66	□□□□□ -1.66
snR57	snR57	YIF1	P53845	314 aa	Known RBP	4.66	□□□□□ -1.66
snR57	snR57	RKM1	Q08961	583 aa	Predicted RBP	4.66	□□□□□ -1.66
snR57	snR57	HIP1	P06775	603 aa		4.65	□□□□□ -1.67
snR57	snR57	RPI1	P23250	407 aa	Known RBP	4.65	□□□□□ -1.67
snR57	snR57	CLB1	P24868	471 aa		4.65	□□□□□ -1.67
snR57	snR57	GEX1	P25596	615 aa		4.65	□□□□□ -1.67
snR57	snR57	BEM1	P29366	551 aa		4.65	□□□□□ -1.67
snR57	snR57	TFB1	P32776	642 aa		4.65	□□□□□ -1.67
snR57	snR57	YBP1	P38315	674 aa		4.65	□□□□□ -1.67
snR57	snR57	TIF5	P38431	405 aa	Known RBP	4.65	□□□□□ -1.67
snR57	snR57	YHR054C	P38780	354 aa		4.65	□□□□□ -1.67
snR57	snR57	IMP4	P53941	290 aa	Known RBP	4.65	□□□□□ -1.67
snR57	snR57	MDM30	Q05930	598 aa		4.65	□□□□□ -1.67
snR57	snR57	YLR345W	Q06137	509 aa		4.65	□□□□□ -1.67
snR57	snR57	CPR1	P14832	162 aa	Known RBP	4.64	□□□□□ -1.67
snR57	snR57	RHB1	P25378	209 aa		4.64	□□□□□ -1.67
snR57	snR57	CPR3	P25719	182 aa		4.64	□□□□□ -1.67
snR57	snR57	YHR218W	P38899	603 aa		4.64	□□□□□ -1.67
snR57	snR57	CAK1	P43568	368 aa	Predicted RBP	4.64	□□□□□ -1.67
snR57	snR57	HNT3	Q08702	217 aa		4.64	□□□□□ -1.67
snR57	snR57	MUM3	Q08750	479 aa		4.64	□□□□□ -1.67
snR57	snR57	ISA2	Q12425	185 aa		4.64	□□□□□ -1.67
snR57	snR57	PMR1	P13586	950 aa		4.63	□□□□□ -1.67
snR57	snR57	ERV1	P27882	189 aa		4.63	□□□□□ -1.67
snR57	snR57	MRP4	P32902	394 aa		4.63	□□□□□ -1.67
snR57	snR57	MKT1	P40850	830 aa	Known RBP	4.63	□□□□□ -1.67
snR57	snR57	SSN8	P47821	323 aa		4.63	□□□□□ -1.67
snR57	snR57	MRP51	Q02950	344 aa		4.63	□□□□□ -1.67
snR57	snR57	YPL199C	Q08954	240 aa		4.63	□□□□□ -1.67
snR57	snR57	YCL021W-A	Q96VH3	125 aa		4.63	□□□□□ -1.67
snR57	snR57	URA4	P20051	364 aa		4.62	□□□□□ -1.67
snR57	snR57	MMS4	P38257	691 aa		4.62	□□□□□ -1.67
snR57	snR57	ACL4	Q03771	387 aa		4.62	□□□□□ -1.67
snR57	snR57	YMR130W	Q04223	302 aa		4.62	□□□□□ -1.67
snR57	snR57	CHS1	P08004	1131 aa		4.61	□□□□□ -1.67
snR57	snR57	SAM1	P10659	382 aa	Known RBP	4.61	□□□□□ -1.67
snR57	snR57	SAM2	P19358	384 aa	Known RBP	4.61	□□□□□ -1.67
snR57	snR57	CPR2	P23285	205 aa		4.61	□□□□□ -1.67
snR57	snR57	TIP1	P27654	210 aa	Predicted RBP	4.61	□□□□□ -1.67
snR57	snR57	BRF1	P29056	596 aa		4.61	□□□□□ -1.67
snR57	snR57	VMA8	P32610	256 aa	Known RBP	4.61	□□□□□ -1.67
snR57	snR57	NAT2	P37293	288 aa		4.61	□□□□□ -1.67
snR57	snR57	RRT2	P38332	387 aa		4.61	□□□□□ -1.67
snR57	snR57	PCA1	P38360	1216 aa		4.61	□□□□□ -1.67
snR57	snR57	SRP72	P38688	640 aa	Known RBP	4.61	□□□□□ -1.67
snR57	snR57	LYS1	P38998	373 aa	RIP-Chip data	4.61	□□□□□ -1.67	not detected
snR57	snR57	ZIM17	P42844	174 aa		4.61	□□□□□ -1.67
snR57	snR57	TCB2	P48231	1178 aa		4.61	□□□□□ -1.67
snR57	snR57	HOT1	Q03213	719 aa		4.61	□□□□□ -1.67
snR57	snR57	DIS3	Q08162	1001 aa	Known RBP	4.61	□□□□□ -1.67
snR57	snR57	YPR022C	Q12139	1133 aa		4.61	□□□□□ -1.67
snR57	snR57	PKH2	Q12236	1081 aa	Known RBP	4.61	□□□□□ -1.67
snR57	snR57	SMC6	Q12749	1114 aa		4.61	□□□□□ -1.67
snR57	snR57	SCEI	P03882	235 aa		4.6	□□□□□ -1.67
snR57	snR57	HEM15	P16622	393 aa		4.6	□□□□□ -1.67
snR57	snR57	CLN1	P20437	546 aa		4.6	□□□□□ -1.67
snR57	snR57	SOR1	P35497	357 aa	Known RBP	4.6	□□□□□ -1.67
snR57	snR57	SLM4	P38247	162 aa		4.6	□□□□□ -1.67
snR57	snR57	MST28	P39552	234 aa		4.6	□□□□□ -1.67
snR57	snR57	RPT4	P53549	437 aa	Known RBP	4.6	□□□□□ -1.67
snR57	snR57	BOR1	P53838	576 aa		4.6	□□□□□ -1.67
snR57	snR57	IBD2	P53892	351 aa		4.6	□□□□□ -1.67
snR57	snR57	AIM32	Q04689	311 aa		4.6	□□□□□ -1.67
snR57	snR57	DCS1	Q06151	350 aa		4.6	□□□□□ -1.67
snR57	snR57	MMR1	Q06324	491 aa		4.6	□□□□□ -1.67
snR57	snR57	SOR2	Q07786	357 aa		4.6	□□□□□ -1.67
snR57	snR57	REX4	Q08237	289 aa		4.6	□□□□□ -1.67
snR57	snR57	SGT1	Q08446	395 aa		4.6	□□□□□ -1.67
snR57	snR57	TIM18	Q08749	192 aa		4.6	□□□□□ -1.67
snR57	snR57	THP3	Q12049	470 aa	Known RBP	4.6	□□□□□ -1.67
snR57	snR57	MED2	Q12124	431 aa		4.6	□□□□□ -1.67
snR57	snR57	ERP4	Q12450	207 aa		4.6	□□□□□ -1.67
snR57	snR57	APE3	P37302	537 aa	Known RBP	4.59	□□□□□ -1.67
snR57	snR57	YML6	P51998	286 aa		4.59	□□□□□ -1.67
snR57	snR57	YNR048W	P53740	393 aa		4.59	□□□□□ -1.67
snR57	snR57	FRE4	P53746	719 aa		4.59	□□□□□ -1.67
snR57	snR57	YLL056C	Q12177	298 aa		4.59	□□□□□ -1.67
snR57	snR57	ORT1	Q12375	292 aa		4.59	□□□□□ -1.67
snR57	snR57	ARG4	P04076	463 aa	Predicted RBP	4.58	□□□□□ -1.68
snR57	snR57	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
snR57	snR57	CTR86	P25355	563 aa		4.58	□□□□□ -1.68
snR57	snR57	SMY1	P32364	656 aa	Known RBP	4.58	□□□□□ -1.68
snR57	snR57	PXA2	P34230	853 aa		4.58	□□□□□ -1.68
snR57	snR57	MIX23	P38162	196 aa		4.58	□□□□□ -1.68
snR57	snR57	YFL067W	P43537	175 aa		4.58	□□□□□ -1.68
snR57	snR57	LAM5	P43560	674 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms