RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 VHT1P53241 593 aa-0.59□□□□□ -2.5
snR47snR47 HIM1Q06674 414 aa-0.59□□□□□ -2.5
snR47snR47 CLP1Q08685 445 aaPredicted RBP-0.59□□□□□ -2.5
snR47snR47 PKH2Q12236 1081 aaKnown RBP-0.59□□□□□ -2.5
snR47snR47 HSH49Q99181 213 aaPredicted RBP-0.59□□□□□ -2.5
snR47snR47 MES1P00958 751 aaKnown RBP-0.6□□□□□ -2.51
snR47snR47 RRP14P36080 434 aaKnown RBP-0.6□□□□□ -2.51
snR47snR47 BNA4P38169 460 aa-0.6□□□□□ -2.51
snR47snR47 NPR3P38742 1146 aa-0.6□□□□□ -2.51
snR47snR47 CCT6P39079 546 aa-0.6□□□□□ -2.51
snR47snR47 CIN4P39110 191 aa-0.6□□□□□ -2.51
snR47snR47 RPS7BP48164 190 aaKnown RBP-0.6□□□□□ -2.51
snR47snR47 LCL3P53153 274 aa-0.6□□□□□ -2.51
snR47snR47 EFM6P53970 246 aa-0.6□□□□□ -2.51
snR47snR47 VTI1Q04338 217 aa-0.6□□□□□ -2.51
snR47snR47 PSK2Q08217 1101 aa-0.6□□□□□ -2.51
snR47snR47 TIM18Q08749 192 aa-0.6□□□□□ -2.51
snR47snR47 FUS3P16892 353 aaKnown RBP-0.61□□□□□ -2.51
snR47snR47 ZIP1P31111 875 aa-0.61□□□□□ -2.51
snR47snR47 YEL043WP32618 956 aa-0.61□□□□□ -2.51
snR47snR47 YEF1P32622 495 aa-0.61□□□□□ -2.51
snR47snR47 OCA5P38738 679 aa-0.61□□□□□ -2.51
snR47snR47 DPB4Q04603 196 aaKnown RBP-0.61□□□□□ -2.51
snR47snR47 TFC7Q12415 435 aa-0.61□□□□□ -2.51
snR47snR47 CEX1Q12453 761 aa-0.61□□□□□ -2.51
snR47snR47 DEP1P31385 405 aa-0.62□□□□□ -2.51
snR47snR47 MRE11P32829 692 aa-0.62□□□□□ -2.51
snR47snR47 YKR032WP36127 104 aa-0.62□□□□□ -2.51
snR47snR47 SYG1P40528 902 aa-0.62□□□□□ -2.51
snR47snR47 EGT2P42835 1041 aa-0.62□□□□□ -2.51
snR47snR47 PTR3P43606 678 aa-0.62□□□□□ -2.51
snR47snR47 ALK1P43633 760 aaKnown RBP-0.62□□□□□ -2.51
snR47snR47 URB2P47108 1174 aa-0.62□□□□□ -2.51
snR47snR47 VID30P53076 958 aa-0.62□□□□□ -2.51
snR47snR47 COG1P53079 417 aa-0.62□□□□□ -2.51
snR47snR47 MST27P53176 234 aa-0.62□□□□□ -2.51
snR47snR47 YGR127WP53275 312 aa-0.62□□□□□ -2.51
snR47snR47 SKI8Q02793 397 aaPredicted RBP-0.62□□□□□ -2.51
snR47snR47 UTP14Q04500 899 aaKnown RBP-0.62□□□□□ -2.51
snR47snR47 PIF1P07271 859 aa-0.63□□□□□ -2.51
snR47snR47 ERG8P24521 451 aa-0.63□□□□□ -2.51
snR47snR47 POL4P25615 582 aa-0.63□□□□□ -2.51
snR47snR47 ATP11P32453 318 aa-0.63□□□□□ -2.51
snR47snR47 YCR041WP37265 110 aa-0.63□□□□□ -2.51
snR47snR47 YBR071WP38243 211 aa-0.63□□□□□ -2.51
snR47snR47 ICS2P38284 255 aa-0.63□□□□□ -2.51
snR47snR47 MED6P38782 295 aa-0.63□□□□□ -2.51
snR47snR47 RRP4P38792 359 aaKnown RBP-0.63□□□□□ -2.51
snR47snR47 JLP2P40206 208 aa-0.63□□□□□ -2.51
snR47snR47 FAR3P46671 204 aa-0.63□□□□□ -2.51
snR47snR47 MRX8Q05473 314 aa-0.63□□□□□ -2.51
snR47snR47 RTP1Q12751 981 aa-0.63□□□□□ -2.51
snR47snR47 CDC24P11433 854 aaPredicted RBP-0.64□□□□□ -2.51
snR47snR47 NRG2P38082 220 aa-0.64□□□□□ -2.51
snR47snR47 REG2P38232 338 aa-0.64□□□□□ -2.51
snR47snR47 SPC72P39723 622 aa-0.64□□□□□ -2.51
snR47snR47 VPS4P52917 437 aa-0.64□□□□□ -2.51
snR47snR47 ZPR1P53303 486 aaKnown RBP-0.64□□□□□ -2.51
snR47snR47 YNR048WP53740 393 aa-0.64□□□□□ -2.51
snR47snR47 YPL113CQ02961 396 aa-0.64□□□□□ -2.51
snR47snR47 INM2Q05533 292 aa-0.64□□□□□ -2.51
snR47snR47 SKG3Q06315 1026 aa-0.64□□□□□ -2.51
snR47snR47 PSR1Q07800 427 aa-0.64□□□□□ -2.51
snR47snR47 DDC1Q08949 612 aa-0.64□□□□□ -2.51
snR47snR47 COX17Q12287 69 aa-0.64□□□□□ -2.51
snR47snR47 PCD1Q12524 340 aa-0.64□□□□□ -2.51
snR47snR47 AUS1Q08409 1394 aa-0.65□□□□□ -2.51
snR47snR47 TOP1P04786 769 aa-0.65□□□□□ -2.51
snR47snR47 CKA2P19454 339 aa-0.65□□□□□ -2.51
snR47snR47 IMG1P25626 169 aa-0.65□□□□□ -2.51
snR47snR47 TCD2P36101 447 aaKnown RBP-0.65□□□□□ -2.51
snR47snR47 ENP1P38333 483 aaKnown RBP-0.65□□□□□ -2.51
snR47snR47 IST3P40565 148 aaPredicted RBP-0.65□□□□□ -2.51
snR47snR47 HSH155P49955 971 aaKnown RBP-0.65□□□□□ -2.51
snR47snR47 YIP1P53039 248 aa-0.65□□□□□ -2.51
snR47snR47 PIL1P53252 339 aaKnown RBP-0.65□□□□□ -2.51
snR47snR47 RHO5P53879 331 aaKnown RBP-0.65□□□□□ -2.51
snR47snR47 TEP1P53916 434 aa-0.65□□□□□ -2.51
snR47snR47 RTN1Q04947 295 aaKnown RBP-0.65□□□□□ -2.51
snR47snR47 YPR022CQ12139 1133 aa-0.65□□□□□ -2.51
snR47snR47 YGK3Q12222 375 aaPredicted RBP-0.65□□□□□ -2.51
snR47snR47 NAG1Q8TGN9 163 aa-0.65□□□□□ -2.51
snR47snR47 BRR1Q99177 341 aaPredicted RBP-0.65□□□□□ -2.51
snR47snR47 TDH2P00358 332 aaKnown RBP-0.66□□□□□ -2.52
snR47snR47 TDH3P00359 332 aaKnown RBP RIP-Chip data-0.66□□□□□ -2.52not detected
snR47snR47 VMA16P23968 213 aa-0.66□□□□□ -2.52
snR47snR47 CLB4P24871 460 aa-0.66□□□□□ -2.52
snR47snR47 DBF4P32325 704 aa-0.66□□□□□ -2.52
snR47snR47 XRS2P33301 854 aa-0.66□□□□□ -2.52
snR47snR47 ECM34P38728 170 aa-0.66□□□□□ -2.52
snR47snR47 ECM14P38836 430 aa-0.66□□□□□ -2.52
snR47snR47 KEL1P38853 1164 aaKnown RBP-0.66□□□□□ -2.52
snR47snR47 PUG1P40100 303 aa-0.66□□□□□ -2.52
snR47snR47 TRF5P48561 642 aaKnown RBP-0.66□□□□□ -2.52
snR47snR47 TGL2P54857 326 aa-0.66□□□□□ -2.52
snR47snR47 CGI121Q03705 181 aaKnown RBP-0.66□□□□□ -2.52
snR47snR47 RRP9Q06506 573 aaKnown RBP-0.66□□□□□ -2.52
snR47snR47 NYV1Q12255 253 aa-0.66□□□□□ -2.52
snR47snR47 YOL114CQ12322 202 aa-0.66□□□□□ -2.52
snR47snR47 SNU66Q12420 587 aaPredicted RBP-0.66□□□□□ -2.52
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms