RNA–Protein interactions for RNA: YPR134W

MSS18, Transcript of Nuclear encoded protein needed for splicing of mitochondrial intron, yeastyeast

Gene MSS18, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS18YPR134W HEM15P16622 393 aa2.4□□□□□ -2.03
MSS18YPR134W MAK31P23059 88 aa2.4□□□□□ -2.03
MSS18YPR134W RNA14P25298 677 aaKnown RBP2.4□□□□□ -2.03
MSS18YPR134W YIM1P28625 365 aa2.4□□□□□ -2.03
MSS18YPR134W PAH1P32567 862 aa2.4□□□□□ -2.03
MSS18YPR134W SLC1P33333 303 aa2.4□□□□□ -2.03
MSS18YPR134W BMH2P34730 273 aaKnown RBP2.4□□□□□ -2.03
MSS18YPR134W MYO3P36006 1272 aa2.4□□□□□ -2.03
MSS18YPR134W KEL1P38853 1164 aaKnown RBP2.4□□□□□ -2.03
MSS18YPR134W VID27P40157 782 aa2.4□□□□□ -2.03
MSS18YPR134W ARC1P46672 376 aaKnown RBP2.4□□□□□ -2.03
MSS18YPR134W GWT1P47026 490 aa2.4□□□□□ -2.03
MSS18YPR134W BUD32P53323 261 aa2.4□□□□□ -2.03
MSS18YPR134W YLR152CP54072 576 aa2.4□□□□□ -2.03
MSS18YPR134W YDR341CQ05506 607 aaKnown RBP2.4□□□□□ -2.03
MSS18YPR134W VIP1Q06685 1146 aaKnown RBP2.4□□□□□ -2.03
MSS18YPR134W YOR365CQ08844 703 aa2.4□□□□□ -2.03
MSS18YPR134W FLO1P32768 1537 aa2.4□□□□□ -2.03
MSS18YPR134W HIP1P06775 603 aa2.39□□□□□ -2.03
MSS18YPR134W CRM1P30822 1084 aaKnown RBP2.39□□□□□ -2.03
MSS18YPR134W SYN8P31377 255 aa2.39□□□□□ -2.03
MSS18YPR134W SSE2P32590 693 aaKnown RBP2.39□□□□□ -2.03
MSS18YPR134W ANP1P32629 500 aa2.39□□□□□ -2.03
MSS18YPR134W YBR144CP34215 104 aa2.39□□□□□ -2.03
MSS18YPR134W RFS1P38234 210 aaKnown RBP2.39□□□□□ -2.03
MSS18YPR134W REE1P40893 198 aa2.39□□□□□ -2.03
MSS18YPR134W ALK1P43633 760 aaKnown RBP2.39□□□□□ -2.03
MSS18YPR134W APT1P49435 187 aaKnown RBP2.39□□□□□ -2.03
MSS18YPR134W LIF1P53150 421 aa2.39□□□□□ -2.03
MSS18YPR134W GPI1P53306 609 aa2.39□□□□□ -2.03
MSS18YPR134W MYO5Q04439 1219 aaKnown RBP2.39□□□□□ -2.03
MSS18YPR134W CSM3Q04659 317 aa2.39□□□□□ -2.03
MSS18YPR134W SPH1Q06160 661 aa2.39□□□□□ -2.03
MSS18YPR134W YDL057WQ07379 328 aa2.39□□□□□ -2.03
MSS18YPR134W BRR1Q99177 341 aaPredicted RBP2.39□□□□□ -2.03
MSS18YPR134W YOL087CQ99247 1116 aa2.39□□□□□ -2.03
MSS18YPR134W MATALPHA2P0CY08 210 aa2.38□□□□□ -2.03
MSS18YPR134W HMLALPHA2P0CY09 210 aa2.38□□□□□ -2.03
MSS18YPR134W COQ1P18900 473 aa2.38□□□□□ -2.03
MSS18YPR134W SGV1P23293 657 aaKnown RBP2.38□□□□□ -2.03
MSS18YPR134W PHO88P38264 188 aaPredicted RBP2.38□□□□□ -2.03
MSS18YPR134W ALD5P40047 520 aaKnown RBP2.38□□□□□ -2.03
MSS18YPR134W YMR147WP40218 223 aaKnown RBP2.38□□□□□ -2.03
MSS18YPR134W BNA1P47096 177 aa2.38□□□□□ -2.03
MSS18YPR134W RET3P53600 189 aa2.38□□□□□ -2.03
MSS18YPR134W IBD2P53892 351 aa2.38□□□□□ -2.03
MSS18YPR134W MDM1Q01846 1127 aa2.38□□□□□ -2.03
MSS18YPR134W YML037CQ03703 340 aa2.38□□□□□ -2.03
MSS18YPR134W BUD22Q04347 519 aaKnown RBP2.38□□□□□ -2.03
MSS18YPR134W YMR027WQ04371 470 aa2.38□□□□□ -2.03
MSS18YPR134W TMS1Q12116 473 aa2.38□□□□□ -2.03
MSS18YPR134W HRT3Q12347 344 aa2.38□□□□□ -2.03
MSS18YPR134W NBL1Q3E7Y6 73 aa2.38□□□□□ -2.03
MSS18YPR134W SUC2P00724 532 aa2.37□□□□□ -2.03
MSS18YPR134W CDC24P11433 854 aaPredicted RBP2.37□□□□□ -2.03
MSS18YPR134W RVS161P25343 265 aaKnown RBP2.37□□□□□ -2.03
MSS18YPR134W YIH1P25637 258 aa2.37□□□□□ -2.03
MSS18YPR134W SHP1P34223 423 aa2.37□□□□□ -2.03
MSS18YPR134W RSM22P36056 628 aa2.37□□□□□ -2.03
MSS18YPR134W MCR1P36060 302 aaKnown RBP2.37□□□□□ -2.03
MSS18YPR134W TVP38P36164 337 aa2.37□□□□□ -2.03
MSS18YPR134W MMF1P40185 145 aaKnown RBP2.37□□□□□ -2.03
MSS18YPR134W YIL067CP40514 678 aa2.37□□□□□ -2.03
MSS18YPR134W VID30P53076 958 aa2.37□□□□□ -2.03
MSS18YPR134W YGR021WP53212 290 aa2.37□□□□□ -2.03
MSS18YPR134W ZPR1P53303 486 aaKnown RBP2.37□□□□□ -2.03
MSS18YPR134W BNI5P53890 448 aaKnown RBP2.37□□□□□ -2.03
MSS18YPR134W APJ1P53940 528 aa2.37□□□□□ -2.03
MSS18YPR134W MSC1Q03104 513 aa2.37□□□□□ -2.03
MSS18YPR134W PIR3Q03180 325 aa2.37□□□□□ -2.03
MSS18YPR134W SNO4Q04902 237 aa2.37□□□□□ -2.03
MSS18YPR134W PHO92Q06390 306 aa2.37□□□□□ -2.03
MSS18YPR134W HSP33Q08914 237 aaKnown RBP2.37□□□□□ -2.03
MSS18YPR134W FMP40Q08968 688 aaPredicted RBP2.37□□□□□ -2.03
MSS18YPR134W HSP32Q08992 237 aa2.37□□□□□ -2.03
MSS18YPR134W NCE102Q12207 173 aaRIP-Chip data2.37□□□□□ -2.03not detected
MSS18YPR134W HIF1Q12373 385 aa2.37□□□□□ -2.03
MSS18YPR134W HSH49Q99181 213 aaPredicted RBP2.37□□□□□ -2.03
MSS18YPR134W MYO1P08964 1928 aa2.36□□□□□ -2.03
MSS18YPR134W RAD52P06778 471 aaKnown RBP2.36□□□□□ -2.03
MSS18YPR134W THR4P16120 514 aaKnown RBP2.36□□□□□ -2.03
MSS18YPR134W CKA2P19454 339 aa2.36□□□□□ -2.03
MSS18YPR134W CHS3P29465 1165 aa2.36□□□□□ -2.03
MSS18YPR134W IMP2'P32351 346 aa2.36□□□□□ -2.03
MSS18YPR134W MRS6P32864 603 aaKnown RBP2.36□□□□□ -2.03
MSS18YPR134W AUR1P36107 401 aaPredicted RBP2.36□□□□□ -2.03
MSS18YPR134W MAL33P38157 468 aa2.36□□□□□ -2.03
MSS18YPR134W RXT2P38255 430 aa2.36□□□□□ -2.03
MSS18YPR134W SIP4P46954 829 aa2.36□□□□□ -2.03
MSS18YPR134W TIS11P47977 285 aa2.36□□□□□ -2.03
MSS18YPR134W FMS1P50264 508 aa2.36□□□□□ -2.03
MSS18YPR134W SHY1P53266 389 aa2.36□□□□□ -2.03
MSS18YPR134W ARP5P53946 755 aa2.36□□□□□ -2.03
MSS18YPR134W RBS1Q05672 457 aaKnown RBP2.36□□□□□ -2.03
MSS18YPR134W MMR1Q06324 491 aa2.36□□□□□ -2.03
MSS18YPR134W CUR1Q06469 252 aa2.36□□□□□ -2.03
MSS18YPR134W LUC7Q07508 261 aaPredicted RBP2.36□□□□□ -2.03
MSS18YPR134W SMC5Q08204 1093 aa2.36□□□□□ -2.03
MSS18YPR134W YLR108CQ12259 485 aa2.36□□□□□ -2.03
MSS18YPR134W SKM1Q12469 655 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms