RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	YGR035C	P53222	116 aa		6.67	□□□□□ -1.34
SNT309	YPR101W	SNF12	P53628	566 aa		6.67	□□□□□ -1.34
SNT309	YPR101W	MPS1	P54199	764 aa		6.67	□□□□□ -1.34
SNT309	YPR101W	SDH1	Q00711	640 aa		6.67	□□□□□ -1.34
SNT309	YPR101W	HER2	Q03557	464 aa		6.67	□□□□□ -1.34
SNT309	YPR101W	YML083C	Q04526	418 aa		6.67	□□□□□ -1.34
SNT309	YPR101W	GRS2	Q06817	618 aa		6.67	□□□□□ -1.34
SNT309	YPR101W	RRT8	Q08219	342 aa		6.67	□□□□□ -1.34
SNT309	YPR101W	GSH2	Q08220	491 aa		6.67	□□□□□ -1.34
SNT309	YPR101W	YOL131W	Q08270	108 aa		6.67	□□□□□ -1.34
SNT309	YPR101W	YOR012W	Q12351	137 aa		6.67	□□□□□ -1.34
SNT309	YPR101W	LPX1	Q12405	387 aa	Known RBP	6.67	□□□□□ -1.34
SNT309	YPR101W	STF2	P16965	84 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	SBA1	P28707	216 aa	Known RBP	6.66	□□□□□ -1.34
SNT309	YPR101W	MRPL9	P31334	269 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	ALY1	P36117	915 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	BAP2	P38084	609 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	HSE1	P38753	452 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	AFG3	P39925	761 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	DLD3	P39976	496 aa	Known RBP	6.66	□□□□□ -1.34
SNT309	YPR101W	BTT1	P40314	149 aa	Predicted RBP	6.66	□□□□□ -1.34
SNT309	YPR101W	GAT1	P43574	510 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	AIM22	P47051	409 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	CSN12	P47130	423 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	AMA1	P50082	593 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	CPR8	P53728	308 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	NUP49	Q02199	472 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	ABZ2	Q03266	374 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	ATG38	Q05789	226 aa	Known RBP	6.66	□□□□□ -1.34
SNT309	YPR101W	YLR345W	Q06137	509 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	YPS7	Q06325	596 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	YPR196W	Q06595	470 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	ARR1	Q06596	294 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	RAD34	Q06665	692 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	HBT1	Q07653	1046 aa	Known RBP	6.66	□□□□□ -1.34
SNT309	YPR101W	NOP12	Q08208	459 aa	Known RBP	6.66	□□□□□ -1.34
SNT309	YPR101W	SAM4	Q08985	325 aa	Known RBP	6.66	□□□□□ -1.34
SNT309	YPR101W	SMF3	Q12078	473 aa	Predicted RBP	6.66	□□□□□ -1.34
SNT309	YPR101W	RPN5	Q12250	445 aa	Known RBP	6.66	□□□□□ -1.34
SNT309	YPR101W	RBD2	Q12270	262 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	HSP42	Q12329	375 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	NDJ1	Q12366	352 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	GTT2	Q12390	233 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	PNS1	Q12412	539 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	PEX11	Q12462	236 aa		6.66	□□□□□ -1.34
SNT309	YPR101W	UNG1	P12887	359 aa		6.65	□□□□□ -1.34
SNT309	YPR101W	TRM1	P15565	570 aa	Known RBP	6.65	□□□□□ -1.34
SNT309	YPR101W	RDS2	P19541	446 aa	Known RBP	6.65	□□□□□ -1.34
SNT309	YPR101W	VPS33	P20795	691 aa		6.65	□□□□□ -1.34
SNT309	YPR101W	SIR1	P21691	654 aa		6.65	□□□□□ -1.34
SNT309	YPR101W	RPL24B	P24000	155 aa	Known RBP	6.65	□□□□□ -1.34
SNT309	YPR101W	SEC17	P32602	292 aa		6.65	□□□□□ -1.34
SNT309	YPR101W	PHO11	P35842	467 aa		6.65	□□□□□ -1.34
SNT309	YPR101W	YPT52	P36018	234 aa	Known RBP	6.65	□□□□□ -1.34
SNT309	YPR101W	PHO12	P38693	467 aa		6.65	□□□□□ -1.34
SNT309	YPR101W	YHR219W	P38900	624 aa		6.65	□□□□□ -1.34
SNT309	YPR101W	DUN1	P39009	513 aa		6.65	□□□□□ -1.34
SNT309	YPR101W	PRE6	P40303	254 aa	Known RBP	6.65	□□□□□ -1.34
SNT309	YPR101W	SOK1	P40317	901 aa		6.65	□□□□□ -1.34
SNT309	YPR101W	NTA1	P40354	457 aa		6.65	□□□□□ -1.34
SNT309	YPR101W	SPO74	P45819	413 aa		6.65	□□□□□ -1.34
SNT309	YPR101W	YGR168C	P53293	376 aa		6.65	□□□□□ -1.34
SNT309	YPR101W	COQ6	P53318	479 aa		6.65	□□□□□ -1.34
SNT309	YPR101W	YNL181W	P53878	407 aa		6.65	□□□□□ -1.34
SNT309	YPR101W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	6.65	□□□□□ -1.34	RIP-Chip
SNT309	YPR101W	GRX5	Q02784	150 aa		6.65	□□□□□ -1.34
SNT309	YPR101W	SWA2	Q06677	668 aa		6.65	□□□□□ -1.34
SNT309	YPR101W	TGL5	Q12043	749 aa		6.65	□□□□□ -1.34
SNT309	YPR101W	ACF2	Q12168	779 aa		6.65	□□□□□ -1.34
SNT309	YPR101W	RRP42	Q12277	265 aa	Predicted RBP	6.65	□□□□□ -1.34
SNT309	YPR101W	GPM1	P00950	247 aa	Known RBP	6.64	□□□□□ -1.35
SNT309	YPR101W	STE3	P06783	470 aa		6.64	□□□□□ -1.35
SNT309	YPR101W	CDC21	P06785	304 aa		6.64	□□□□□ -1.35
SNT309	YPR101W	YAR066W	P0CX18	203 aa		6.64	□□□□□ -1.35
SNT309	YPR101W	YHR214W	P0CX19	203 aa		6.64	□□□□□ -1.35
SNT309	YPR101W	DBF2	P22204	572 aa		6.64	□□□□□ -1.35
SNT309	YPR101W	CHA1	P25379	360 aa	Known RBP	6.64	□□□□□ -1.35
SNT309	YPR101W	POT1	P27796	417 aa	Known RBP RIP-Chip data	6.64	□□□□□ -1.35	not detected
SNT309	YPR101W	SFP1	P32432	683 aa		6.64	□□□□□ -1.35
SNT309	YPR101W	HIR2	P32480	875 aa		6.64	□□□□□ -1.35
SNT309	YPR101W	PRP18	P33411	251 aa	Predicted RBP	6.64	□□□□□ -1.35
SNT309	YPR101W	SDH3	P33421	198 aa		6.64	□□□□□ -1.35
SNT309	YPR101W	ARA1	P38115	344 aa		6.64	□□□□□ -1.35
SNT309	YPR101W	YHR020W	P38708	688 aa	Known RBP	6.64	□□□□□ -1.35
SNT309	YPR101W	PAN6	P40459	309 aa		6.64	□□□□□ -1.35
SNT309	YPR101W	GOR1	P53839	350 aa		6.64	□□□□□ -1.35
SNT309	YPR101W	YNL260C	P53846	198 aa		6.64	□□□□□ -1.35
SNT309	YPR101W	MET31	Q03081	177 aa		6.64	□□□□□ -1.35
SNT309	YPR101W	YMD8	Q03697	442 aa		6.64	□□□□□ -1.35
SNT309	YPR101W	VHS1	Q03785	461 aa		6.64	□□□□□ -1.35
SNT309	YPR101W	RTN1	Q04947	295 aa	Known RBP	6.64	□□□□□ -1.35
SNT309	YPR101W	VPS74	Q06385	345 aa		6.64	□□□□□ -1.35
SNT309	YPR101W	BUD7	Q08754	746 aa		6.64	□□□□□ -1.35
SNT309	YPR101W	NSI1	Q12457	570 aa		6.64	□□□□□ -1.35
SNT309	YPR101W	MHT1	Q12525	324 aa		6.64	□□□□□ -1.35
SNT309	YPR101W	YBL113C	Q7M4S9	792 aa		6.64	□□□□□ -1.35
SNT309	YPR101W	PHO5	P00635	467 aa		6.63	□□□□□ -1.35
SNT309	YPR101W	MAS1	P10507	462 aa		6.63	□□□□□ -1.35
SNT309	YPR101W	KAR1	P11927	433 aa		6.63	□□□□□ -1.35
SNT309	YPR101W	CAP2	P13517	287 aa		6.63	□□□□□ -1.35

Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms