RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W SLX1P38324 304 aa2.85□□□□□ -1.95
MRPL40YPL173W PCA1P38360 1216 aa2.85□□□□□ -1.95
MRPL40YPL173W YTA12P40341 825 aa2.85□□□□□ -1.95
MRPL40YPL173W AZF1P41696 914 aa2.85□□□□□ -1.95
MRPL40YPL173W YJR011CP47086 261 aaPredicted RBP2.85□□□□□ -1.95
MRPL40YPL173W YPL107WQ02873 248 aa2.85□□□□□ -1.95
MRPL40YPL173W HSP31Q04432 237 aa2.85□□□□□ -1.95
MRPL40YPL173W YMR034CQ05131 434 aaPredicted RBP2.85□□□□□ -1.95
MRPL40YPL173W SYO1Q07395 620 aa2.85□□□□□ -1.95
MRPL40YPL173W SOR2Q07786 357 aa2.85□□□□□ -1.95
MRPL40YPL173W MED2Q12124 431 aa2.85□□□□□ -1.95
MRPL40YPL173W HSP42Q12329 375 aa2.85□□□□□ -1.95
MRPL40YPL173W FRE6Q12473 712 aa2.85□□□□□ -1.95
MRPL40YPL173W MTR10Q99189 972 aa2.85□□□□□ -1.95
MRPL40YPL173W CAR1P00812 333 aaKnown RBP2.84□□□□□ -1.95
MRPL40YPL173W LEU4P06208 619 aaKnown RBP2.84□□□□□ -1.95
MRPL40YPL173W GLN3P18494 730 aa2.84□□□□□ -1.95
MRPL40YPL173W SEC62P21825 274 aa2.84□□□□□ -1.95
MRPL40YPL173W POT1P27796 417 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
MRPL40YPL173W SWH1P35845 1188 aa2.84□□□□□ -1.95
MRPL40YPL173W MIC60P36112 540 aa2.84□□□□□ -1.95
MRPL40YPL173W MMS4P38257 691 aa2.84□□□□□ -1.95
MRPL40YPL173W FAD1P38913 306 aa2.84□□□□□ -1.95
MRPL40YPL173W YIR014WP40570 242 aa2.84□□□□□ -1.95
MRPL40YPL173W TRS85P46944 698 aa2.84□□□□□ -1.95
MRPL40YPL173W RHO5P53879 331 aaKnown RBP2.84□□□□□ -1.95
MRPL40YPL173W NCS2P53923 493 aaPredicted RBP2.84□□□□□ -1.95
MRPL40YPL173W ARK1P53974 638 aa2.84□□□□□ -1.95
MRPL40YPL173W RPM2Q02773 1202 aa2.84□□□□□ -1.95
MRPL40YPL173W DIG1Q03063 452 aaKnown RBP2.84□□□□□ -1.95
MRPL40YPL173W RLI1Q03195 608 aaKnown RBP2.84□□□□□ -1.95
MRPL40YPL173W PGC1Q08959 321 aa2.84□□□□□ -1.95
MRPL40YPL173W SMF3Q12078 473 aaPredicted RBP2.84□□□□□ -1.95
MRPL40YPL173W AEP3Q12089 606 aa2.84□□□□□ -1.95
MRPL40YPL173W YDL009CQ12210 107 aa2.84□□□□□ -1.95
MRPL40YPL173W NFI1Q12216 726 aa2.84□□□□□ -1.95
MRPL40YPL173W SPT7P35177 1332 aa2.84□□□□□ -1.96
MRPL40YPL173W ADE4P04046 510 aaKnown RBP2.83□□□□□ -1.96
MRPL40YPL173W SRV2P17555 526 aaKnown RBP2.83□□□□□ -1.96
MRPL40YPL173W DAP2P18962 818 aa2.83□□□□□ -1.96
MRPL40YPL173W ECM25P32525 599 aa2.83□□□□□ -1.96
MRPL40YPL173W ANP1P32629 500 aa2.83□□□□□ -1.96
MRPL40YPL173W RAD24P32641 659 aa2.83□□□□□ -1.96
MRPL40YPL173W REC114P32841 428 aa2.83□□□□□ -1.96
MRPL40YPL173W SIP2P34164 415 aaKnown RBP2.83□□□□□ -1.96
MRPL40YPL173W ADH5P38113 351 aaKnown RBP2.83□□□□□ -1.96
MRPL40YPL173W MLH1P38920 769 aa2.83□□□□□ -1.96
MRPL40YPL173W YND1P40009 630 aa2.83□□□□□ -1.96
MRPL40YPL173W CUE5Q08412 411 aaKnown RBP2.83□□□□□ -1.96
MRPL40YPL173W LSP1Q12230 341 aaKnown RBP2.83□□□□□ -1.96
MRPL40YPL173W CSR2Q12734 1121 aa2.83□□□□□ -1.96
MRPL40YPL173W MRS3P10566 314 aa2.82□□□□□ -1.96
MRPL40YPL173W CDC23P16522 626 aa2.82□□□□□ -1.96
MRPL40YPL173W YCR022CP25620 114 aa2.82□□□□□ -1.96
MRPL40YPL173W SEC1P30619 724 aaKnown RBP2.82□□□□□ -1.96
MRPL40YPL173W SPC110P32380 944 aa2.82□□□□□ -1.96
MRPL40YPL173W RPN2P32565 945 aaKnown RBP2.82□□□□□ -1.96
MRPL40YPL173W CBP4P37267 147 aa2.82□□□□□ -1.96
MRPL40YPL173W YSW1P38280 609 aa2.82□□□□□ -1.96
MRPL40YPL173W RRP4P38792 359 aaKnown RBP2.82□□□□□ -1.96
MRPL40YPL173W GCD10P41814 478 aa2.82□□□□□ -1.96
MRPL40YPL173W PHO86P46956 311 aa2.82□□□□□ -1.96
MRPL40YPL173W MLC1P53141 149 aa2.82□□□□□ -1.96
MRPL40YPL173W PCP1P53259 346 aa2.82□□□□□ -1.96
MRPL40YPL173W IRC15Q02733 499 aa2.82□□□□□ -1.96
MRPL40YPL173W PRP42Q03776 544 aaKnown RBP2.82□□□□□ -1.96
MRPL40YPL173W RPN9Q04062 393 aaKnown RBP2.82□□□□□ -1.96
MRPL40YPL173W YDR387CQ04162 555 aa2.82□□□□□ -1.96
MRPL40YPL173W YDR341CQ05506 607 aaKnown RBP2.82□□□□□ -1.96
MRPL40YPL173W HCR1Q05775 265 aaKnown RBP2.82□□□□□ -1.96
MRPL40YPL173W MRPL51Q06090 140 aaPredicted RBP2.82□□□□□ -1.96
MRPL40YPL173W SNT309Q06091 175 aaPredicted RBP2.82□□□□□ -1.96
MRPL40YPL173W NDL1Q06568 189 aa2.82□□□□□ -1.96
MRPL40YPL173W YEH2Q07950 538 aa2.82□□□□□ -1.96
MRPL40YPL173W ILV5P06168 395 aaKnown RBP2.81□□□□□ -1.96
MRPL40YPL173W RPI1P23250 407 aaKnown RBP2.81□□□□□ -1.96
MRPL40YPL173W CTR86P25355 563 aa2.81□□□□□ -1.96
MRPL40YPL173W SMY1P32364 656 aaKnown RBP2.81□□□□□ -1.96
MRPL40YPL173W APE2P32454 952 aaKnown RBP2.81□□□□□ -1.96
MRPL40YPL173W LAS1P36146 502 aaPredicted RBP2.81□□□□□ -1.96
MRPL40YPL173W RRN10P38204 145 aa2.81□□□□□ -1.96
MRPL40YPL173W SIF2P38262 535 aa2.81□□□□□ -1.96
MRPL40YPL173W HAT2P39984 401 aa2.81□□□□□ -1.96
MRPL40YPL173W YIL169CP40442 995 aa2.81□□□□□ -1.96
MRPL40YPL173W YPS6P40583 537 aa2.81□□□□□ -1.96
MRPL40YPL173W GWT1P47026 490 aa2.81□□□□□ -1.96
MRPL40YPL173W TOF1P53840 1238 aa2.81□□□□□ -1.96
MRPL40YPL173W YIF1P53845 314 aaKnown RBP2.81□□□□□ -1.96
MRPL40YPL173W DSL1P53847 754 aa2.81□□□□□ -1.96
MRPL40YPL173W EOS1P53938 366 aa2.81□□□□□ -1.96
MRPL40YPL173W MEH1Q02205 184 aa2.81□□□□□ -1.96
MRPL40YPL173W TAF12Q03761 539 aa2.81□□□□□ -1.96
MRPL40YPL173W YDR415CQ04033 374 aaPredicted RBP2.81□□□□□ -1.96
MRPL40YPL173W HIS4P00815 799 aaKnown RBP2.8□□□□□ -1.96
MRPL40YPL173W PMR1P13586 950 aa2.8□□□□□ -1.96
MRPL40YPL173W EXO70P19658 623 aa2.8□□□□□ -1.96
MRPL40YPL173W KRR1P25586 316 aaPredicted RBP2.8□□□□□ -1.96
MRPL40YPL173W MSP1P28737 362 aa2.8□□□□□ -1.96
MRPL40YPL173W FRE2P36033 711 aa2.8□□□□□ -1.96
MRPL40YPL173W PFF1P38244 976 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms