RNA–Protein interactions for RNA: YPL019C

VTC3, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC3, Length 2,508 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC3	YPL019C	COS12	P53053	380 aa		2.32	□□□□□ -2.04
VTC3	YPL019C	TEX1	P53851	422 aa	Known RBP	2.32	□□□□□ -2.04
VTC3	YPL019C	CTK1	Q03957	528 aa	Known RBP	2.32	□□□□□ -2.04
VTC3	YPL019C	MDM30	Q05930	598 aa		2.32	□□□□□ -2.04
VTC3	YPL019C	HUA2	Q12134	243 aa		2.32	□□□□□ -2.04
VTC3	YPL019C	FUM1	P08417	488 aa	Known RBP	2.32	□□□□□ -2.04
VTC3	YPL019C	ATP11	P32453	318 aa		2.32	□□□□□ -2.04
VTC3	YPL019C	ORC2	P32833	620 aa		2.32	□□□□□ -2.04
VTC3	YPL019C	EHT1	P38295	451 aa		2.32	□□□□□ -2.04
VTC3	YPL019C	UBA4	P38820	440 aa		2.32	□□□□□ -2.04
VTC3	YPL019C	END3	P39013	349 aa		2.32	□□□□□ -2.04
VTC3	YPL019C	PZF1	P39933	429 aa		2.32	□□□□□ -2.04
VTC3	YPL019C	SER3	P40054	469 aa		2.32	□□□□□ -2.04
VTC3	YPL019C	YMR134W	P40207	237 aa		2.32	□□□□□ -2.04
VTC3	YPL019C	IMA5	P40884	581 aa		2.32	□□□□□ -2.04
VTC3	YPL019C	PET130	P47065	347 aa		2.32	□□□□□ -2.04
VTC3	YPL019C	IBA57	P47158	497 aa		2.32	□□□□□ -2.04
VTC3	YPL019C	PRP31	P49704	494 aa	Predicted RBP	2.32	□□□□□ -2.04
VTC3	YPL019C	EXG2	P52911	562 aa		2.32	□□□□□ -2.04
VTC3	YPL019C	BTN2	P53286	410 aa		2.32	□□□□□ -2.04
VTC3	YPL019C	SED5	Q01590	340 aa		2.32	□□□□□ -2.04
VTC3	YPL019C	HLR1	Q04429	423 aa		2.32	□□□□□ -2.04
VTC3	YPL019C	YLR224W	Q05947	369 aa		2.32	□□□□□ -2.04
VTC3	YPL019C	YDL121C	Q07541	149 aa		2.32	□□□□□ -2.04
VTC3	YPL019C	BRR1	Q99177	341 aa	Predicted RBP	2.32	□□□□□ -2.04
VTC3	YPL019C	COX1	P00401	534 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	IMA3	P0CW40	589 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	IMA4	P0CW41	589 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	NSP1	P14907	823 aa	Known RBP	2.31	□□□□□ -2.04
VTC3	YPL019C	GID7	P25569	745 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	YCL042W	P25572	119 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	YCL068C	P25593	260 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	SRB4	P32569	687 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	MGM101	P32787	269 aa	Known RBP	2.31	□□□□□ -2.04
VTC3	YPL019C	RRP1	P35178	278 aa	Predicted RBP	2.31	□□□□□ -2.04
VTC3	YPL019C	TCD1	P38756	429 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	EMP65	P40085	556 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	SCC4	P40090	624 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	UTP18	P40362	594 aa	Predicted RBP	2.31	□□□□□ -2.04
VTC3	YPL019C	NOP9	P47077	666 aa	Known RBP	2.31	□□□□□ -2.04
VTC3	YPL019C	RNR4	P49723	345 aa	Known RBP	2.31	□□□□□ -2.04
VTC3	YPL019C	MPS2	P53159	387 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	SGF73	P53165	657 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	MRS2	Q01926	470 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	VPS38	Q05919	439 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	NOP12	Q08208	459 aa	Known RBP	2.31	□□□□□ -2.04
VTC3	YPL019C	IMA2	Q08295	589 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	RAX1	Q08760	435 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	YOR114W	Q12219	294 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	YLR111W	Q12528	110 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	YAR066W	P0CX18	203 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	YHR214W	P0CX19	203 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	CDC24	P11433	854 aa	Predicted RBP	2.31	□□□□□ -2.04
VTC3	YPL019C	RSR1	P13856	272 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	FRS1	P15624	595 aa	Known RBP	2.31	□□□□□ -2.04
VTC3	YPL019C	YCR102C	P25608	368 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	YCR099C	P25657	155 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	PRE4	P30657	266 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	UGP1	P32861	499 aa	Known RBP	2.31	□□□□□ -2.04
VTC3	YPL019C	THI80	P35202	319 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	RMA1	P36001	430 aa	Known RBP	2.31	□□□□□ -2.04
VTC3	YPL019C	MOH1	P38191	138 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	RPP1	P38786	293 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	YHR127W	P38833	243 aa	Known RBP	2.31	□□□□□ -2.04
VTC3	YPL019C	GPI16	P38875	610 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	MEP1	P40260	492 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	BNA1	P47096	177 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	VPS73	P53142	486 aa	Known RBP	2.31	□□□□□ -2.04
VTC3	YPL019C	ERG26	P53199	349 aa	Known RBP	2.31	□□□□□ -2.04
VTC3	YPL019C	DIG1	Q03063	452 aa	Known RBP	2.31	□□□□□ -2.04
VTC3	YPL019C	AKR2	Q12013	749 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	YDR056C	Q12025	205 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	NUR1	Q12066	484 aa		2.31	□□□□□ -2.04
VTC3	YPL019C	ERG20	P08524	352 aa	Known RBP	2.3	□□□□□ -2.04
VTC3	YPL019C	ARG1	P22768	420 aa		2.3	□□□□□ -2.04
VTC3	YPL019C	RAD57	P25301	460 aa		2.3	□□□□□ -2.04
VTC3	YPL019C	RRP43	P25359	394 aa	Predicted RBP	2.3	□□□□□ -2.04
VTC3	YPL019C	NAM9	P27929	486 aa		2.3	□□□□□ -2.04
VTC3	YPL019C	YJU2	P28320	278 aa	Predicted RBP	2.3	□□□□□ -2.04
VTC3	YPL019C	ATO2	P32907	282 aa		2.3	□□□□□ -2.04
VTC3	YPL019C	SHM2	P37291	469 aa	Known RBP	2.3	□□□□□ -2.04
VTC3	YPL019C	RKM3	P38222	552 aa		2.3	□□□□□ -2.04
VTC3	YPL019C	MNL1	P38888	796 aa		2.3	□□□□□ -2.04
VTC3	YPL019C	SCS2	P40075	244 aa	Known RBP	2.3	□□□□□ -2.04
VTC3	YPL019C	HOS4	P40480	1083 aa		2.3	□□□□□ -2.04
VTC3	YPL019C	BIT61	P47041	543 aa		2.3	□□□□□ -2.04
VTC3	YPL019C	MAD3	P47074	515 aa		2.3	□□□□□ -2.04
VTC3	YPL019C	HOC1	P47124	396 aa		2.3	□□□□□ -2.04
VTC3	YPL019C	MTL1	P53214	551 aa		2.3	□□□□□ -2.04
VTC3	YPL019C	FHN1	P53279	174 aa		2.3	□□□□□ -2.04
VTC3	YPL019C	YNR071C	P53757	342 aa		2.3	□□□□□ -2.04
VTC3	YPL019C	MTG1	Q03151	367 aa	Predicted RBP	2.3	□□□□□ -2.04
VTC3	YPL019C	YMR210W	Q03649	449 aa		2.3	□□□□□ -2.04
VTC3	YPL019C	NUP53	Q03790	475 aa		2.3	□□□□□ -2.04
VTC3	YPL019C	YMR034C	Q05131	434 aa	Predicted RBP	2.3	□□□□□ -2.04
VTC3	YPL019C	YDL218W	Q07629	317 aa		2.3	□□□□□ -2.04
VTC3	YPL019C	VHS3	Q08438	674 aa		2.3	□□□□□ -2.04
VTC3	YPL019C	ATG29	Q12092	213 aa		2.3	□□□□□ -2.04
VTC3	YPL019C	YOR342C	Q12182	319 aa		2.3	□□□□□ -2.04
VTC3	YPL019C	RMD5	Q12508	421 aa		2.3	□□□□□ -2.04

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms