RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN8	YOR261C	IBD2	P53892	351 aa		3.92	□□□□□ -1.78
RPN8	YOR261C	ELP3	Q02908	557 aa	Known RBP	3.92	□□□□□ -1.78
RPN8	YOR261C	SIL1	Q08199	421 aa		3.92	□□□□□ -1.78
RPN8	YOR261C	ITR1	P30605	584 aa		3.91	□□□□□ -1.78
RPN8	YOR261C	YBL059W	P34224	193 aa		3.91	□□□□□ -1.78
RPN8	YOR261C	HCS1	P34243	683 aa		3.91	□□□□□ -1.78
RPN8	YOR261C	SWH1	P35845	1188 aa		3.91	□□□□□ -1.78
RPN8	YOR261C	MST28	P39552	234 aa		3.91	□□□□□ -1.78
RPN8	YOR261C	SRB7	P47822	140 aa		3.91	□□□□□ -1.78
RPN8	YOR261C	MRP51	Q02950	344 aa		3.91	□□□□□ -1.78
RPN8	YOR261C	PBA1	Q05778	276 aa		3.91	□□□□□ -1.78
RPN8	YOR261C	ESA1	Q08649	445 aa		3.91	□□□□□ -1.78
RPN8	YOR261C	TMS1	Q12116	473 aa		3.91	□□□□□ -1.78
RPN8	YOR261C	SCM3	Q12334	223 aa		3.91	□□□□□ -1.78
RPN8	YOR261C	YLR278C	Q05854	1341 aa		3.91	□□□□□ -1.78
RPN8	YOR261C	CPR4	P25334	318 aa		3.9	□□□□□ -1.79
RPN8	YOR261C	TIP1	P27654	210 aa	Predicted RBP	3.9	□□□□□ -1.79
RPN8	YOR261C	DEG1	P31115	442 aa	Known RBP	3.9	□□□□□ -1.79
RPN8	YOR261C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.9	□□□□□ -1.79	not detected
RPN8	YOR261C	OST1	P41543	476 aa	Known RBP	3.9	□□□□□ -1.79
RPN8	YOR261C	ECM27	P47144	725 aa		3.9	□□□□□ -1.79
RPN8	YOR261C	FMS1	P50264	508 aa		3.9	□□□□□ -1.79
RPN8	YOR261C	MNP1	P53163	194 aa	Predicted RBP	3.9	□□□□□ -1.79
RPN8	YOR261C	YIF1	P53845	314 aa	Known RBP	3.9	□□□□□ -1.79
RPN8	YOR261C	SMA2	Q04658	369 aa		3.9	□□□□□ -1.79
RPN8	YOR261C	MUM3	Q08750	479 aa		3.9	□□□□□ -1.79
RPN8	YOR261C	YPR022C	Q12139	1133 aa		3.9	□□□□□ -1.79
RPN8	YOR261C	YLR108C	Q12259	485 aa		3.9	□□□□□ -1.79
RPN8	YOR261C	RAD61	Q99359	647 aa		3.9	□□□□□ -1.79
RPN8	YOR261C	CLC1	P17891	233 aa		3.89	□□□□□ -1.79
RPN8	YOR261C	CLB3	P24870	427 aa		3.89	□□□□□ -1.79
RPN8	YOR261C	GEX1	P25596	615 aa		3.89	□□□□□ -1.79
RPN8	YOR261C	NDT80	P38830	627 aa		3.89	□□□□□ -1.79
RPN8	YOR261C	LSM5	P40089	93 aa	Known RBP	3.89	□□□□□ -1.79
RPN8	YOR261C	YJR011C	P47086	261 aa	Predicted RBP	3.89	□□□□□ -1.79
RPN8	YOR261C	BTN2	P53286	410 aa		3.89	□□□□□ -1.79
RPN8	YOR261C	YGR250C	P53316	781 aa	Known RBP	3.89	□□□□□ -1.79
RPN8	YOR261C	HXT11	P54862	567 aa		3.89	□□□□□ -1.79
RPN8	YOR261C	MDM30	Q05930	598 aa		3.89	□□□□□ -1.79
RPN8	YOR261C	SFI1	Q12369	946 aa		3.89	□□□□□ -1.79
RPN8	YOR261C	HIS4	P00815	799 aa	Known RBP	3.88	□□□□□ -1.79
RPN8	YOR261C	HHF1	P02309	103 aa	Known RBP	3.88	□□□□□ -1.79
RPN8	YOR261C	REV1	P12689	985 aa		3.88	□□□□□ -1.79
RPN8	YOR261C	SPS22	P25380	463 aa		3.88	□□□□□ -1.79
RPN8	YOR261C	SIN4	P32259	974 aa		3.88	□□□□□ -1.79
RPN8	YOR261C	APE2	P32454	952 aa	Known RBP	3.88	□□□□□ -1.79
RPN8	YOR261C	SDH3	P33421	198 aa		3.88	□□□□□ -1.79
RPN8	YOR261C	RIB5	P38145	238 aa		3.88	□□□□□ -1.79
RPN8	YOR261C	REE1	P40893	198 aa		3.88	□□□□□ -1.79
RPN8	YOR261C	SSN8	P47821	323 aa		3.88	□□□□□ -1.79
RPN8	YOR261C	YMR155W	Q03795	547 aa		3.88	□□□□□ -1.79
RPN8	YOR261C	ARX1	Q03862	593 aa	Known RBP	3.88	□□□□□ -1.79
RPN8	YOR261C	TIM18	Q08749	192 aa		3.88	□□□□□ -1.79
RPN8	YOR261C	PKH2	Q12236	1081 aa	Known RBP	3.88	□□□□□ -1.79
RPN8	YOR261C	RPI1	P23250	407 aa	Known RBP	3.87	□□□□□ -1.79
RPN8	YOR261C	NFU1	P32860	256 aa		3.87	□□□□□ -1.79
RPN8	YOR261C	STB6	P36085	766 aa		3.87	□□□□□ -1.79
RPN8	YOR261C	LYS1	P38998	373 aa	RIP-Chip data	3.87	□□□□□ -1.79	not detected
RPN8	YOR261C	FAA2	P39518	744 aa		3.87	□□□□□ -1.79
RPN8	YOR261C	YGR210C	P42942	411 aa		3.87	□□□□□ -1.79
RPN8	YOR261C	LAM5	P43560	674 aa		3.87	□□□□□ -1.79
RPN8	YOR261C	COS5	P47187	383 aa		3.87	□□□□□ -1.79
RPN8	YOR261C	YNR048W	P53740	393 aa		3.87	□□□□□ -1.79
RPN8	YOR261C	FRE4	P53746	719 aa		3.87	□□□□□ -1.79
RPN8	YOR261C	TOF1	P53840	1238 aa		3.87	□□□□□ -1.79
RPN8	YOR261C	HEL2	Q05580	639 aa	Known RBP	3.87	□□□□□ -1.79
RPN8	YOR261C	MRPL35	Q06678	367 aa		3.87	□□□□□ -1.79
RPN8	YOR261C	TSR1	Q07381	788 aa	Known RBP	3.87	□□□□□ -1.79
RPN8	YOR261C	COS7	Q07788	383 aa		3.87	□□□□□ -1.79
RPN8	YOR261C	RKM1	Q08961	583 aa	Predicted RBP	3.87	□□□□□ -1.79
RPN8	YOR261C	ORT1	Q12375	292 aa		3.87	□□□□□ -1.79
RPN8	YOR261C	ISN1	Q99312	450 aa		3.87	□□□□□ -1.79
RPN8	YOR261C	KRE2	P27809	442 aa		3.86	□□□□□ -1.79
RPN8	YOR261C	ARO2	P28777	376 aa	Known RBP	3.86	□□□□□ -1.79
RPN8	YOR261C	JNM1	P36224	373 aa		3.86	□□□□□ -1.79
RPN8	YOR261C	YBR137W	P38276	179 aa		3.86	□□□□□ -1.79
RPN8	YOR261C	GPD2	P41911	440 aa	Known RBP	3.86	□□□□□ -1.79
RPN8	YOR261C	RPS0B	P46654	252 aa	Known RBP	3.86	□□□□□ -1.79
RPN8	YOR261C	RRG1	Q12167	365 aa	Predicted RBP	3.86	□□□□□ -1.79
RPN8	YOR261C	LDB16	P25587	256 aa		3.85	□□□□□ -1.79
RPN8	YOR261C	YME2	P32843	850 aa		3.85	□□□□□ -1.79
RPN8	YOR261C	ARA1	P38115	344 aa		3.85	□□□□□ -1.79
RPN8	YOR261C	YHR054C	P38780	354 aa		3.85	□□□□□ -1.79
RPN8	YOR261C	SHE10	P53075	577 aa		3.85	□□□□□ -1.79
RPN8	YOR261C	YMR181C	Q03231	154 aa		3.85	□□□□□ -1.79
RPN8	YOR261C	RRP45	Q05636	305 aa	Known RBP	3.85	□□□□□ -1.79
RPN8	YOR261C	VAM3	Q12241	283 aa		3.85	□□□□□ -1.79
RPN8	YOR261C	HSP42	Q12329	375 aa		3.85	□□□□□ -1.79
RPN8	YOR261C	SUP35	P05453	685 aa	Known RBP	3.84	□□□□□ -1.79
RPN8	YOR261C	CTR86	P25355	563 aa		3.84	□□□□□ -1.79
RPN8	YOR261C	RHB1	P25378	209 aa		3.84	□□□□□ -1.79
RPN8	YOR261C	HIR2	P32480	875 aa		3.84	□□□□□ -1.79
RPN8	YOR261C	YEL045C	P32616	141 aa		3.84	□□□□□ -1.79
RPN8	YOR261C	PIM1	P36775	1133 aa		3.84	□□□□□ -1.79
RPN8	YOR261C	NTC20	P38302	140 aa	Predicted RBP	3.84	□□□□□ -1.79
RPN8	YOR261C	PRM5	P40476	318 aa		3.84	□□□□□ -1.79
RPN8	YOR261C	WWM1	P43582	211 aa	Known RBP	3.84	□□□□□ -1.79
RPN8	YOR261C	YGL138C	P53122	345 aa		3.84	□□□□□ -1.79
RPN8	YOR261C	RMD5	Q12508	421 aa		3.84	□□□□□ -1.79
RPN8	YOR261C	TEF1	P02994	458 aa	Known RBP	3.83	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms