RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W SCD6P45978 349 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
SRL1YOR247W OCA2P53949 197 aa3.09□□□□□ -1.91
SRL1YOR247W SEC5P89102 971 aa3.09□□□□□ -1.91
SRL1YOR247W BET4Q00618 327 aa3.09□□□□□ -1.91
SRL1YOR247W IRC15Q02733 499 aa3.09□□□□□ -1.91
SRL1YOR247W PRP42Q03776 544 aaKnown RBP3.09□□□□□ -1.91
SRL1YOR247W RPN9Q04062 393 aaKnown RBP3.09□□□□□ -1.91
SRL1YOR247W YLR281CQ05863 155 aa3.09□□□□□ -1.91
SRL1YOR247W MRPL51Q06090 140 aaPredicted RBP3.09□□□□□ -1.91
SRL1YOR247W REX4Q08237 289 aa3.09□□□□□ -1.91
SRL1YOR247W KEL3Q08979 651 aaPredicted RBP3.09□□□□□ -1.91
SRL1YOR247W RUP1Q12242 671 aa3.09□□□□□ -1.91
SRL1YOR247W SEC63P14906 663 aa3.08□□□□□ -1.92
SRL1YOR247W HSP104P31539 908 aaKnown RBP3.08□□□□□ -1.92
SRL1YOR247W SMI1P32566 505 aa3.08□□□□□ -1.92
SRL1YOR247W UIP5P36137 443 aa3.08□□□□□ -1.92
SRL1YOR247W MRPL4P36517 319 aa3.08□□□□□ -1.92
SRL1YOR247W PCF11P39081 626 aaPredicted RBP3.08□□□□□ -1.92
SRL1YOR247W SAS2P40963 338 aa3.08□□□□□ -1.92
SRL1YOR247W TOF1P53840 1238 aa3.08□□□□□ -1.92
SRL1YOR247W PNG1Q02890 363 aa3.08□□□□□ -1.92
SRL1YOR247W MDM30Q05930 598 aa3.08□□□□□ -1.92
SRL1YOR247W BNA5Q05979 453 aa3.08□□□□□ -1.92
SRL1YOR247W SYO1Q07395 620 aa3.08□□□□□ -1.92
SRL1YOR247W YDL009CQ12210 107 aa3.08□□□□□ -1.92
SRL1YOR247W RRD2Q12461 358 aa3.08□□□□□ -1.92
SRL1YOR247W TFB5Q3E7C1 72 aaPredicted RBP3.08□□□□□ -1.92
SRL1YOR247W ADE4P04046 510 aaKnown RBP3.07□□□□□ -1.92
SRL1YOR247W YAR066WP0CX18 203 aa3.07□□□□□ -1.92
SRL1YOR247W YHR214WP0CX19 203 aa3.07□□□□□ -1.92
SRL1YOR247W ARO3P14843 370 aaKnown RBP3.07□□□□□ -1.92
SRL1YOR247W ERG1P32476 496 aaKnown RBP3.07□□□□□ -1.92
SRL1YOR247W FRE1P32791 686 aa3.07□□□□□ -1.92
SRL1YOR247W TRS65P32893 560 aa3.07□□□□□ -1.92
SRL1YOR247W SOR1P35497 357 aaKnown RBP3.07□□□□□ -1.92
SRL1YOR247W PFF1P38244 976 aa3.07□□□□□ -1.92
SRL1YOR247W ISC1P40015 477 aaKnown RBP3.07□□□□□ -1.92
SRL1YOR247W YIR014WP40570 242 aa3.07□□□□□ -1.92
SRL1YOR247W AZF1P41696 914 aa3.07□□□□□ -1.92
SRL1YOR247W BRO1P48582 844 aa3.07□□□□□ -1.92
SRL1YOR247W GIP3Q03016 1276 aa3.07□□□□□ -1.92
SRL1YOR247W YDR341CQ05506 607 aaKnown RBP3.07□□□□□ -1.92
SRL1YOR247W YFH1Q07540 174 aa3.07□□□□□ -1.92
SRL1YOR247W SOR2Q07786 357 aa3.07□□□□□ -1.92
SRL1YOR247W DSE3Q08729 430 aa3.07□□□□□ -1.92
SRL1YOR247W BSC1Q12140 328 aa3.07□□□□□ -1.92
SRL1YOR247W YLL056CQ12177 298 aa3.07□□□□□ -1.92
SRL1YOR247W SRN2Q99176 213 aa3.07□□□□□ -1.92
SRL1YOR247W ALG1P16661 449 aa3.06□□□□□ -1.92
SRL1YOR247W YCP4P25349 247 aaKnown RBP3.06□□□□□ -1.92
SRL1YOR247W POT1P27796 417 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
SRL1YOR247W CRM1P30822 1084 aaKnown RBP3.06□□□□□ -1.92
SRL1YOR247W SMY1P32364 656 aaKnown RBP3.06□□□□□ -1.92
SRL1YOR247W ECM25P32525 599 aa3.06□□□□□ -1.92
SRL1YOR247W ASK1P35734 292 aa3.06□□□□□ -1.92
SRL1YOR247W FRE2P36033 711 aa3.06□□□□□ -1.92
SRL1YOR247W RIM2P38127 377 aa3.06□□□□□ -1.92
SRL1YOR247W YSW1P38280 609 aa3.06□□□□□ -1.92
SRL1YOR247W GND1P38720 489 aaKnown RBP3.06□□□□□ -1.92
SRL1YOR247W SNM1P40993 198 aa3.06□□□□□ -1.92
SRL1YOR247W DIM1P41819 318 aaKnown RBP3.06□□□□□ -1.92
SRL1YOR247W GUF1P46943 645 aa3.06□□□□□ -1.92
SRL1YOR247W TRS85P46944 698 aa3.06□□□□□ -1.92
SRL1YOR247W FYV8P46949 817 aaKnown RBP3.06□□□□□ -1.92
SRL1YOR247W PHO86P46956 311 aa3.06□□□□□ -1.92
SRL1YOR247W PCP1P53259 346 aa3.06□□□□□ -1.92
SRL1YOR247W YDR541CQ03049 344 aa3.06□□□□□ -1.92
SRL1YOR247W TAF12Q03761 539 aa3.06□□□□□ -1.92
SRL1YOR247W NDL1Q06568 189 aa3.06□□□□□ -1.92
SRL1YOR247W NSE1Q07913 336 aa3.06□□□□□ -1.92
SRL1YOR247W MLH2Q07980 695 aa3.06□□□□□ -1.92
SRL1YOR247W AFT2Q08957 416 aa3.06□□□□□ -1.92
SRL1YOR247W RKM5Q12367 367 aa3.06□□□□□ -1.92
SRL1YOR247W NBL1Q3E7Y6 73 aa3.06□□□□□ -1.92
SRL1YOR247W CYB2P00175 591 aa3.05□□□□□ -1.92
SRL1YOR247W AMD1P15274 810 aaKnown RBP3.05□□□□□ -1.92
SRL1YOR247W PHO91P27514 894 aa3.05□□□□□ -1.92
SRL1YOR247W CYS4P32582 507 aaKnown RBP3.05□□□□□ -1.92
SRL1YOR247W YEL043WP32618 956 aa3.05□□□□□ -1.92
SRL1YOR247W YBL028CP38202 106 aa3.05□□□□□ -1.92
SRL1YOR247W KAP104P38217 918 aaKnown RBP3.05□□□□□ -1.92
SRL1YOR247W SIF2P38262 535 aa3.05□□□□□ -1.92
SRL1YOR247W PCA1P38360 1216 aa3.05□□□□□ -1.92
SRL1YOR247W MLH1P38920 769 aa3.05□□□□□ -1.92
SRL1YOR247W GAT2P40209 560 aa3.05□□□□□ -1.92
SRL1YOR247W CHS6P40955 746 aa3.05□□□□□ -1.92
SRL1YOR247W HMS2P47175 358 aa3.05□□□□□ -1.92
SRL1YOR247W ASN2P49090 572 aaKnown RBP3.05□□□□□ -1.92
SRL1YOR247W YIP1P53039 248 aa3.05□□□□□ -1.92
SRL1YOR247W DBP9Q06218 594 aaKnown RBP3.05□□□□□ -1.92
SRL1YOR247W SGT1Q08446 395 aa3.05□□□□□ -1.92
SRL1YOR247W MUM3Q08750 479 aa3.05□□□□□ -1.92
SRL1YOR247W CSR2Q12734 1121 aa3.05□□□□□ -1.92
SRL1YOR247W CDC21P06785 304 aa3.04□□□□□ -1.92
SRL1YOR247W YFL068WP0CX99 160 aa3.04□□□□□ -1.92
SRL1YOR247W YLL066W-AP0CY00 160 aa3.04□□□□□ -1.92
SRL1YOR247W YLL067W-AP0CY01 160 aa3.04□□□□□ -1.92
SRL1YOR247W GLN3P18494 730 aa3.04□□□□□ -1.92
SRL1YOR247W RAD57P25301 460 aa3.04□□□□□ -1.92
SRL1YOR247W YCR100CP25606 316 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms