RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C MNL2Q12205 849 aa8.33□□□□□ -1.08
RPD3YNL330C GPR1Q12361 961 aa8.33□□□□□ -1.08
RPD3YNL330C PHO5P00635 467 aa8.32□□□□□ -1.08
RPD3YNL330C NFT1P0CE68 1218 aa8.32□□□□□ -1.08
RPD3YNL330C HMG2P12684 1045 aa8.32□□□□□ -1.08
RPD3YNL330C ARF2P19146 181 aaKnown RBP8.32□□□□□ -1.08
RPD3YNL330C YBR071WP38243 211 aa8.32□□□□□ -1.08
RPD3YNL330C YHR078WP38799 552 aa8.32□□□□□ -1.08
RPD3YNL330C AST2P39945 430 aaKnown RBP8.32□□□□□ -1.08
RPD3YNL330C YEL020CP39994 560 aa8.32□□□□□ -1.08
RPD3YNL330C SPO73P40031 143 aa8.32□□□□□ -1.08
RPD3YNL330C FCY21P40039 528 aa8.32□□□□□ -1.08
RPD3YNL330C MPM1P40364 252 aa8.32□□□□□ -1.08
RPD3YNL330C NQM1P53228 333 aaPredicted RBP8.32□□□□□ -1.08
RPD3YNL330C SNF12P53628 566 aa8.32□□□□□ -1.08
RPD3YNL330C YNL140CP53910 189 aa8.32□□□□□ -1.08
RPD3YNL330C CCE1Q03702 353 aa8.32□□□□□ -1.08
RPD3YNL330C PEX10Q05568 337 aa8.32□□□□□ -1.08
RPD3YNL330C EMG1Q06287 252 aaKnown RBP8.32□□□□□ -1.08
RPD3YNL330C VPS74Q06385 345 aa8.32□□□□□ -1.08
RPD3YNL330C SWA2Q06677 668 aa8.32□□□□□ -1.08
RPD3YNL330C GRS2Q06817 618 aa8.32□□□□□ -1.08
RPD3YNL330C NGL1Q08213 363 aaKnown RBP8.32□□□□□ -1.08
RPD3YNL330C RRT8Q08219 342 aa8.32□□□□□ -1.08
RPD3YNL330C YPL245WQ12179 454 aaKnown RBP8.32□□□□□ -1.08
RPD3YNL330C YGK3Q12222 375 aaPredicted RBP8.32□□□□□ -1.08
RPD3YNL330C PST1Q12355 444 aa8.32□□□□□ -1.08
RPD3YNL330C SRN2Q99176 213 aa8.32□□□□□ -1.08
RPD3YNL330C LEU1P07264 779 aaKnown RBP8.31□□□□□ -1.08
RPD3YNL330C PUT2P07275 575 aa8.31□□□□□ -1.08
RPD3YNL330C SDH2P21801 266 aa8.31□□□□□ -1.08
RPD3YNL330C GIT1P25346 518 aa8.31□□□□□ -1.08
RPD3YNL330C SEC17P32602 292 aa8.31□□□□□ -1.08
RPD3YNL330C LDH1P38139 375 aa8.31□□□□□ -1.08
RPD3YNL330C DMA1P38823 416 aa8.31□□□□□ -1.08
RPD3YNL330C SPF1P39986 1215 aaKnown RBP8.31□□□□□ -1.08
RPD3YNL330C ISC1P40015 477 aaKnown RBP8.31□□□□□ -1.08
RPD3YNL330C SOK1P40317 901 aa8.31□□□□□ -1.08
RPD3YNL330C MET12P46151 657 aa8.31□□□□□ -1.08
RPD3YNL330C RAI1P53063 387 aaKnown RBP8.31□□□□□ -1.08
RPD3YNL330C MDM34P53083 459 aa8.31□□□□□ -1.08
RPD3YNL330C PRM8P53174 237 aa8.31□□□□□ -1.08
RPD3YNL330C FRE4P53746 719 aa8.31□□□□□ -1.08
RPD3YNL330C IGO1P53897 168 aa8.31□□□□□ -1.08
RPD3YNL330C YPL014WQ02606 381 aa8.31□□□□□ -1.08
RPD3YNL330C TSR2Q06672 205 aaKnown RBP8.31□□□□□ -1.08
RPD3YNL330C THP3Q12049 470 aaKnown RBP8.31□□□□□ -1.08
RPD3YNL330C SCM3Q12334 223 aa8.31□□□□□ -1.08
RPD3YNL330C RDS2P19541 446 aaKnown RBP8.3□□□□□ -1.08
RPD3YNL330C SIR1P21691 654 aa8.3□□□□□ -1.08
RPD3YNL330C YCL049CP25577 312 aa8.3□□□□□ -1.08
RPD3YNL330C ARA1P38115 344 aa8.3□□□□□ -1.08
RPD3YNL330C DBP8P38719 431 aa8.3□□□□□ -1.08
RPD3YNL330C PCL5P38794 229 aa8.3□□□□□ -1.08
RPD3YNL330C LRP1P38801 184 aaKnown RBP8.3□□□□□ -1.08
RPD3YNL330C ATG7P38862 630 aa8.3□□□□□ -1.08
RPD3YNL330C HOC1P47124 396 aa8.3□□□□□ -1.08
RPD3YNL330C FOL2P51601 243 aaKnown RBP8.3□□□□□ -1.08
RPD3YNL330C PRM1P53835 661 aa8.3□□□□□ -1.08
RPD3YNL330C VAC7P53950 1165 aa8.3□□□□□ -1.08
RPD3YNL330C BSC2Q05611 235 aa8.3□□□□□ -1.08
RPD3YNL330C MRX10Q05648 414 aa8.3□□□□□ -1.08
RPD3YNL330C YLR345WQ06137 509 aa8.3□□□□□ -1.08
RPD3YNL330C RBD2Q12270 262 aa8.3□□□□□ -1.08
RPD3YNL330C YLR126CQ12288 251 aa8.3□□□□□ -1.08
RPD3YNL330C NSI1Q12457 570 aa8.3□□□□□ -1.08
RPD3YNL330C SBA1P28707 216 aaKnown RBP8.29□□□□□ -1.08
RPD3YNL330C SEC61P32915 480 aa8.29□□□□□ -1.08
RPD3YNL330C IRS4P36115 615 aaKnown RBP8.29□□□□□ -1.08
RPD3YNL330C AHP1P38013 176 aaKnown RBP8.29□□□□□ -1.08
RPD3YNL330C DUN1P39009 513 aa8.29□□□□□ -1.08
RPD3YNL330C CEM1P39525 442 aa8.29□□□□□ -1.08
RPD3YNL330C ALR2P43553 858 aa8.29□□□□□ -1.08
RPD3YNL330C YJR030CP47101 745 aa8.29□□□□□ -1.08
RPD3YNL330C YJR149WP47177 404 aa8.29□□□□□ -1.08
RPD3YNL330C CWC23P52868 283 aaPredicted RBP8.29□□□□□ -1.08
RPD3YNL330C MNT2P53059 558 aa8.29□□□□□ -1.08
RPD3YNL330C MPS2P53159 387 aa8.29□□□□□ -1.08
RPD3YNL330C YGR015CP53208 328 aa8.29□□□□□ -1.08
RPD3YNL330C NUP49Q02199 472 aa8.29□□□□□ -1.08
RPD3YNL330C GRX5Q02784 150 aa8.29□□□□□ -1.08
RPD3YNL330C GRX3Q03835 250 aa8.29□□□□□ -1.08
RPD3YNL330C RNH1Q04740 348 aa8.29□□□□□ -1.08
RPD3YNL330C GSH2Q08220 491 aa8.29□□□□□ -1.08
RPD3YNL330C NMD4Q12129 218 aa8.29□□□□□ -1.08
RPD3YNL330C YPR011CQ12251 326 aa8.29□□□□□ -1.08
RPD3YNL330C PNS1Q12412 539 aa8.29□□□□□ -1.08
RPD3YNL330C YLR422WQ06409 1932 aa8.29□□□□□ -1.08
RPD3YNL330C RPL6BP05739 176 aaKnown RBP8.29□□□□□ -1.08
RPD3YNL330C CPA1P07258 411 aaKnown RBP8.29□□□□□ -1.08
RPD3YNL330C PPH22P23595 377 aa8.29□□□□□ -1.08
RPD3YNL330C RPL24BP24000 155 aaKnown RBP8.29□□□□□ -1.08
RPD3YNL330C ACH1P32316 526 aa8.29□□□□□ -1.08
RPD3YNL330C ISF1P32488 338 aa8.29□□□□□ -1.08
RPD3YNL330C RTG1P32607 177 aa8.29□□□□□ -1.08
RPD3YNL330C YIR016WP40572 265 aa8.29□□□□□ -1.08
RPD3YNL330C IRC6P43615 237 aa8.29□□□□□ -1.08
RPD3YNL330C BIT61P47041 543 aa8.29□□□□□ -1.08
RPD3YNL330C HST3P53687 447 aa8.29□□□□□ -1.08
RPD3YNL330C YMD8Q03697 442 aa8.29□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms