RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	HOS1	Q12214	470 aa		5.49	□□□□□ -1.53
CSL4	YNL232W	AVL9	Q12500	764 aa		5.49	□□□□□ -1.53
CSL4	YNL232W	ADE8	P04161	214 aa		5.48	□□□□□ -1.53
CSL4	YNL232W	NSP1	P14907	823 aa	Known RBP	5.48	□□□□□ -1.53
CSL4	YNL232W	CLB1	P24868	471 aa		5.48	□□□□□ -1.53
CSL4	YNL232W	KES1	P35844	434 aa	Known RBP	5.48	□□□□□ -1.53
CSL4	YNL232W	OM14	P38325	134 aa		5.48	□□□□□ -1.53
CSL4	YNL232W	SMF2	P38778	549 aa		5.48	□□□□□ -1.53
CSL4	YNL232W	DPH1	P40487	425 aa	Known RBP	5.48	□□□□□ -1.53
CSL4	YNL232W	MPS2	P53159	387 aa		5.48	□□□□□ -1.53
CSL4	YNL232W	CPR6	P53691	371 aa	Known RBP	5.48	□□□□□ -1.53
CSL4	YNL232W	ERG13	P54839	491 aa	Known RBP	5.48	□□□□□ -1.53
CSL4	YNL232W	DIG1	Q03063	452 aa	Known RBP	5.48	□□□□□ -1.53
CSL4	YNL232W	FRE5	Q08908	694 aa		5.48	□□□□□ -1.53
CSL4	YNL232W	YDR056C	Q12025	205 aa		5.48	□□□□□ -1.53
CSL4	YNL232W	PST1	Q12355	444 aa		5.48	□□□□□ -1.53
CSL4	YNL232W	ERG20	P08524	352 aa	Known RBP	5.47	□□□□□ -1.53
CSL4	YNL232W	RNA1	P11745	407 aa	Known RBP	5.47	□□□□□ -1.53
CSL4	YNL232W	ARG1	P22768	420 aa		5.47	□□□□□ -1.53
CSL4	YNL232W	TRX2	P22803	104 aa	Known RBP	5.47	□□□□□ -1.53
CSL4	YNL232W	SMI1	P32566	505 aa		5.47	□□□□□ -1.53
CSL4	YNL232W	RRP1	P35178	278 aa	Predicted RBP	5.47	□□□□□ -1.53
CSL4	YNL232W	CUE2	P36075	443 aa	Known RBP	5.47	□□□□□ -1.53
CSL4	YNL232W	YBR139W	P38109	508 aa		5.47	□□□□□ -1.53
CSL4	YNL232W	VHC1	P38329	1120 aa		5.47	□□□□□ -1.53
CSL4	YNL232W	TDA11	P38854	504 aa		5.47	□□□□□ -1.53
CSL4	YNL232W	MET30	P39014	640 aa		5.47	□□□□□ -1.53
CSL4	YNL232W	SPF1	P39986	1215 aa	Known RBP	5.47	□□□□□ -1.53
CSL4	YNL232W	YGR250C	P53316	781 aa	Known RBP	5.47	□□□□□ -1.53
CSL4	YNL232W	SVL3	Q03088	825 aa	Known RBP	5.47	□□□□□ -1.53
CSL4	YNL232W	YDR109C	Q04585	715 aa		5.47	□□□□□ -1.53
CSL4	YNL232W	ROY1	Q04847	553 aa		5.47	□□□□□ -1.53
CSL4	YNL232W	YOL159C	Q08300	171 aa		5.47	□□□□□ -1.53
CSL4	YNL232W	YLR462W	O13556	202 aa		5.46	□□□□□ -1.54
CSL4	YNL232W	MF(ALPHA)2	P32435	120 aa		5.46	□□□□□ -1.54
CSL4	YNL232W	RMA1	P36001	430 aa	Known RBP	5.46	□□□□□ -1.54
CSL4	YNL232W	YHL049C	P38722	271 aa		5.46	□□□□□ -1.54
CSL4	YNL232W	CTF8	P38877	133 aa		5.46	□□□□□ -1.54
CSL4	YNL232W	YFL064C	P43540	174 aa		5.46	□□□□□ -1.54
CSL4	YNL232W	HOC1	P47124	396 aa		5.46	□□□□□ -1.54
CSL4	YNL232W	NUP116	Q02630	1113 aa		5.46	□□□□□ -1.54
CSL4	YNL232W	NHX1	Q04121	633 aa		5.46	□□□□□ -1.54
CSL4	YNL232W	VAM6	Q07468	1049 aa		5.46	□□□□□ -1.54
CSL4	YNL232W	YOR376W	Q08900	122 aa		5.46	□□□□□ -1.54
CSL4	YNL232W	YBL111C	Q3E7Y5	667 aa		5.46	□□□□□ -1.54
CSL4	YNL232W	YCL068C	P25593	260 aa		5.45	□□□□□ -1.54
CSL4	YNL232W	ADE1	P27616	306 aa		5.45	□□□□□ -1.54
CSL4	YNL232W	INM1	P38710	295 aa		5.45	□□□□□ -1.54
CSL4	YNL232W	MNN1	P39106	762 aa		5.45	□□□□□ -1.54
CSL4	YNL232W	SIT1	P39980	628 aa		5.45	□□□□□ -1.54
CSL4	YNL232W	LCP5	P40079	357 aa	Predicted RBP	5.45	□□□□□ -1.54
CSL4	YNL232W	MNT3	P40549	630 aa		5.45	□□□□□ -1.54
CSL4	YNL232W	CEP3	P40969	608 aa		5.45	□□□□□ -1.54
CSL4	YNL232W	TFG2	P41896	400 aa	Predicted RBP	5.45	□□□□□ -1.54
CSL4	YNL232W	PET130	P47065	347 aa		5.45	□□□□□ -1.54
CSL4	YNL232W	RPN14	P53196	417 aa		5.45	□□□□□ -1.54
CSL4	YNL232W	YGR015C	P53208	328 aa		5.45	□□□□□ -1.54
CSL4	YNL232W	SNP1	Q00916	300 aa	Predicted RBP	5.45	□□□□□ -1.54
CSL4	YNL232W	YMR034C	Q05131	434 aa	Predicted RBP	5.45	□□□□□ -1.54
CSL4	YNL232W	YPS7	Q06325	596 aa		5.45	□□□□□ -1.54
CSL4	YNL232W	MMT2	Q08970	484 aa		5.45	□□□□□ -1.54
CSL4	YNL232W	DAS2	Q12084	232 aa		5.45	□□□□□ -1.54
CSL4	YNL232W	ATG29	Q12092	213 aa		5.45	□□□□□ -1.54
CSL4	YNL232W	BAG7	Q12128	409 aa		5.45	□□□□□ -1.54
CSL4	YNL232W	MDM32	Q12171	622 aa		5.45	□□□□□ -1.54
CSL4	YNL232W	COX17	Q12287	69 aa		5.45	□□□□□ -1.54
CSL4	YNL232W	CDC21	P06785	304 aa		5.44	□□□□□ -1.54
CSL4	YNL232W	GLK1	P17709	500 aa	Known RBP	5.44	□□□□□ -1.54
CSL4	YNL232W	RFA1	P22336	621 aa	Known RBP	5.44	□□□□□ -1.54
CSL4	YNL232W	MRP8	P35719	219 aa		5.44	□□□□□ -1.54
CSL4	YNL232W	RRN10	P38204	145 aa		5.44	□□□□□ -1.54
CSL4	YNL232W	AZF1	P41696	914 aa		5.44	□□□□□ -1.54
CSL4	YNL232W	YJR142W	P47173	342 aa		5.44	□□□□□ -1.54
CSL4	YNL232W	KAP114	P53067	1004 aa		5.44	□□□□□ -1.54
CSL4	YNL232W	HOS2	P53096	452 aa	Predicted RBP	5.44	□□□□□ -1.54
CSL4	YNL232W	VPS75	P53853	264 aa		5.44	□□□□□ -1.54
CSL4	YNL232W	ATG4	P53867	494 aa		5.44	□□□□□ -1.54
CSL4	YNL232W	MPS1	P54199	764 aa		5.44	□□□□□ -1.54
CSL4	YNL232W	MOT3	P54785	490 aa	Known RBP	5.44	□□□□□ -1.54
CSL4	YNL232W	PRP38	Q00723	242 aa	Predicted RBP	5.44	□□□□□ -1.54
CSL4	YNL232W	DLT1	Q04216	342 aa		5.44	□□□□□ -1.54
CSL4	YNL232W	NUS1	Q12063	375 aa		5.44	□□□□□ -1.54
CSL4	YNL232W	SWM1	Q12379	170 aa		5.44	□□□□□ -1.54
CSL4	YNL232W	MET3	P08536	511 aa		5.43	□□□□□ -1.54
CSL4	YNL232W	TPS2	P31688	896 aa	Known RBP	5.43	□□□□□ -1.54
CSL4	YNL232W	PEX5	P35056	612 aa		5.43	□□□□□ -1.54
CSL4	YNL232W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.43	□□□□□ -1.54	not detected
CSL4	YNL232W	YDR089W	P38966	869 aa		5.43	□□□□□ -1.54
CSL4	YNL232W	GGC1	P38988	300 aa		5.43	□□□□□ -1.54
CSL4	YNL232W	NDE1	P40215	560 aa		5.43	□□□□□ -1.54
CSL4	YNL232W	TOK1	P40310	691 aa		5.43	□□□□□ -1.54
CSL4	YNL232W	YFL012W	P43580	148 aa		5.43	□□□□□ -1.54
CSL4	YNL232W	YJR149W	P47177	404 aa		5.43	□□□□□ -1.54
CSL4	YNL232W	BIO3	P50277	480 aa		5.43	□□□□□ -1.54
CSL4	YNL232W	YSA1	Q01976	231 aa		5.43	□□□□□ -1.54
CSL4	YNL232W	YKR011C	Q02209	353 aa		5.43	□□□□□ -1.54
CSL4	YNL232W	CYK3	Q07533	885 aa		5.43	□□□□□ -1.54
CSL4	YNL232W	MRH1	Q12117	320 aa	Predicted RBP	5.43	□□□□□ -1.54
CSL4	YNL232W	YRM1	Q12340	786 aa		5.43	□□□□□ -1.54
CSL4	YNL232W	BPH1	P25356	2167 aa		5.42	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms