RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO20	YMR017W	CPR3	P25719	182 aa		4.16	□□□□□ -1.74
SPO20	YMR017W	BEM1	P29366	551 aa		4.16	□□□□□ -1.74
SPO20	YMR017W	TIF5	P38431	405 aa	Known RBP	4.16	□□□□□ -1.74
SPO20	YMR017W	YHR054C	P38780	354 aa		4.16	□□□□□ -1.74
SPO20	YMR017W	COS5	P47187	383 aa		4.16	□□□□□ -1.74
SPO20	YMR017W	DON1	Q05610	365 aa		4.16	□□□□□ -1.74
SPO20	YMR017W	COS7	Q07788	383 aa		4.16	□□□□□ -1.74
SPO20	YMR017W	YCL021W-A	Q96VH3	125 aa		4.16	□□□□□ -1.74
SPO20	YMR017W	KRE2	P27809	442 aa		4.15	□□□□□ -1.75
SPO20	YMR017W	SIN4	P32259	974 aa		4.15	□□□□□ -1.75
SPO20	YMR017W	PIM1	P36775	1133 aa		4.15	□□□□□ -1.75
SPO20	YMR017W	YBP1	P38315	674 aa		4.15	□□□□□ -1.75
SPO20	YMR017W	PCA1	P38360	1216 aa		4.15	□□□□□ -1.75
SPO20	YMR017W	MKT1	P40850	830 aa	Known RBP	4.15	□□□□□ -1.75
SPO20	YMR017W	SAS2	P40963	338 aa		4.15	□□□□□ -1.75
SPO20	YMR017W	RPS0B	P46654	252 aa	Known RBP	4.15	□□□□□ -1.75
SPO20	YMR017W	YIF1	P53845	314 aa	Known RBP	4.15	□□□□□ -1.75
SPO20	YMR017W	SKO1	Q02100	647 aa		4.15	□□□□□ -1.75
SPO20	YMR017W	RMT2	Q03305	412 aa		4.15	□□□□□ -1.75
SPO20	YMR017W	ERB1	Q04660	807 aa	Known RBP	4.15	□□□□□ -1.75
SPO20	YMR017W	HIS4	P00815	799 aa	Known RBP	4.14	□□□□□ -1.75
SPO20	YMR017W	HIR2	P32480	875 aa		4.14	□□□□□ -1.75
SPO20	YMR017W	MRP4	P32902	394 aa		4.14	□□□□□ -1.75
SPO20	YMR017W	ECM27	P47144	725 aa		4.14	□□□□□ -1.75
SPO20	YMR017W	MRP51	Q02950	344 aa		4.14	□□□□□ -1.75
SPO20	YMR017W	MDM30	Q05930	598 aa		4.14	□□□□□ -1.75
SPO20	YMR017W	HNT3	Q08702	217 aa		4.14	□□□□□ -1.75
SPO20	YMR017W	YPL199C	Q08954	240 aa		4.14	□□□□□ -1.75
SPO20	YMR017W	HSP42	Q12329	375 aa		4.14	□□□□□ -1.75
SPO20	YMR017W	SAM1	P10659	382 aa	Known RBP	4.13	□□□□□ -1.75
SPO20	YMR017W	PMR1	P13586	950 aa		4.13	□□□□□ -1.75
SPO20	YMR017W	SAM2	P19358	384 aa	Known RBP	4.13	□□□□□ -1.75
SPO20	YMR017W	CLB1	P24868	471 aa		4.13	□□□□□ -1.75
SPO20	YMR017W	RHB1	P25378	209 aa		4.13	□□□□□ -1.75
SPO20	YMR017W	URA7	P28274	579 aa	Known RBP	4.13	□□□□□ -1.75
SPO20	YMR017W	DBF4	P32325	704 aa		4.13	□□□□□ -1.75
SPO20	YMR017W	TFB1	P32776	642 aa		4.13	□□□□□ -1.75
SPO20	YMR017W	RGT1	P32862	1170 aa		4.13	□□□□□ -1.75
SPO20	YMR017W	RFC3	P38629	340 aa		4.13	□□□□□ -1.75
SPO20	YMR017W	YJR011C	P47086	261 aa	Predicted RBP	4.13	□□□□□ -1.75
SPO20	YMR017W	YLL056C	Q12177	298 aa		4.13	□□□□□ -1.75
SPO20	YMR017W	CHS1	P08004	1131 aa		4.12	□□□□□ -1.75
SPO20	YMR017W	URA4	P20051	364 aa		4.12	□□□□□ -1.75
SPO20	YMR017W	NAT2	P37293	288 aa		4.12	□□□□□ -1.75
SPO20	YMR017W	BOR1	P53838	576 aa		4.12	□□□□□ -1.75
SPO20	YMR017W	MUM3	Q08750	479 aa		4.12	□□□□□ -1.75
SPO20	YMR017W	RKM1	Q08961	583 aa	Predicted RBP	4.12	□□□□□ -1.75
SPO20	YMR017W	THP3	Q12049	470 aa	Known RBP	4.12	□□□□□ -1.75
SPO20	YMR017W	YPR022C	Q12139	1133 aa		4.12	□□□□□ -1.75
SPO20	YMR017W	HEM15	P16622	393 aa		4.11	□□□□□ -1.75
SPO20	YMR017W	GEX1	P25596	615 aa		4.11	□□□□□ -1.75
SPO20	YMR017W	TIP1	P27654	210 aa	Predicted RBP	4.11	□□□□□ -1.75
SPO20	YMR017W	MMS4	P38257	691 aa		4.11	□□□□□ -1.75
SPO20	YMR017W	CAK1	P43568	368 aa	Predicted RBP	4.11	□□□□□ -1.75
SPO20	YMR017W	SSN8	P47821	323 aa		4.11	□□□□□ -1.75
SPO20	YMR017W	YLR345W	Q06137	509 aa		4.11	□□□□□ -1.75
SPO20	YMR017W	DIS3	Q08162	1001 aa	Known RBP	4.11	□□□□□ -1.75
SPO20	YMR017W	ISA2	Q12425	185 aa		4.11	□□□□□ -1.75
SPO20	YMR017W	CLN1	P20437	546 aa		4.1	□□□□□ -1.75
SPO20	YMR017W	ERV1	P27882	189 aa		4.1	□□□□□ -1.75
SPO20	YMR017W	SOR1	P35497	357 aa	Known RBP	4.1	□□□□□ -1.75
SPO20	YMR017W	RRT2	P38332	387 aa		4.1	□□□□□ -1.75
SPO20	YMR017W	LYS1	P38998	373 aa	RIP-Chip data	4.1	□□□□□ -1.75	not detected
SPO20	YMR017W	MST28	P39552	234 aa		4.1	□□□□□ -1.75
SPO20	YMR017W	YFL067W	P43537	175 aa		4.1	□□□□□ -1.75
SPO20	YMR017W	LAM5	P43560	674 aa		4.1	□□□□□ -1.75
SPO20	YMR017W	FRE4	P53746	719 aa		4.1	□□□□□ -1.75
SPO20	YMR017W	IBD2	P53892	351 aa		4.1	□□□□□ -1.75
SPO20	YMR017W	ACL4	Q03771	387 aa		4.1	□□□□□ -1.75
SPO20	YMR017W	YMR130W	Q04223	302 aa		4.1	□□□□□ -1.75
SPO20	YMR017W	AIM32	Q04689	311 aa		4.1	□□□□□ -1.75
SPO20	YMR017W	SOR2	Q07786	357 aa		4.1	□□□□□ -1.75
SPO20	YMR017W	TLG2	Q08144	397 aa		4.1	□□□□□ -1.75
SPO20	YMR017W	TIM18	Q08749	192 aa		4.1	□□□□□ -1.75
SPO20	YMR017W	PKH2	Q12236	1081 aa	Known RBP	4.1	□□□□□ -1.75
SPO20	YMR017W	RRP12	Q12754	1228 aa	Known RBP	4.1	□□□□□ -1.75
SPO20	YMR017W	YER078W-A	Q3E7A2	54 aa		4.1	□□□□□ -1.75
SPO20	YMR017W	SCEI	P03882	235 aa		4.09	□□□□□ -1.75
SPO20	YMR017W	CBS2	P14905	389 aa		4.09	□□□□□ -1.75
SPO20	YMR017W	BRF1	P29056	596 aa		4.09	□□□□□ -1.75
SPO20	YMR017W	AVT5	P38176	459 aa		4.09	□□□□□ -1.75
SPO20	YMR017W	SLM4	P38247	162 aa		4.09	□□□□□ -1.75
SPO20	YMR017W	YIL067C	P40514	678 aa		4.09	□□□□□ -1.75
SPO20	YMR017W	OST1	P41543	476 aa	Known RBP	4.09	□□□□□ -1.75
SPO20	YMR017W	ZIM17	P42844	174 aa		4.09	□□□□□ -1.75
SPO20	YMR017W	HMS2	P47175	358 aa		4.09	□□□□□ -1.75
SPO20	YMR017W	GOR1	P53839	350 aa		4.09	□□□□□ -1.75
SPO20	YMR017W	SCW10	Q04951	389 aa		4.09	□□□□□ -1.75
SPO20	YMR017W	DCS1	Q06151	350 aa		4.09	□□□□□ -1.75
SPO20	YMR017W	REX4	Q08237	289 aa		4.09	□□□□□ -1.75
SPO20	YMR017W	SGT1	Q08446	395 aa		4.09	□□□□□ -1.75
SPO20	YMR017W	TY1B-A	O13527	1196 aa	Known RBP	4.08	□□□□□ -1.76
SPO20	YMR017W	ARG4	P04076	463 aa	Predicted RBP	4.08	□□□□□ -1.76
SPO20	YMR017W	APE3	P37302	537 aa	Known RBP	4.08	□□□□□ -1.76
SPO20	YMR017W	MIX23	P38162	196 aa		4.08	□□□□□ -1.76
SPO20	YMR017W	SRP72	P38688	640 aa	Known RBP	4.08	□□□□□ -1.76
SPO20	YMR017W	TCB2	P48231	1178 aa		4.08	□□□□□ -1.76
SPO20	YMR017W	YNR048W	P53740	393 aa		4.08	□□□□□ -1.76
SPO20	YMR017W	MMR1	Q06324	491 aa		4.08	□□□□□ -1.76
SPO20	YMR017W	ESA1	Q08649	445 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 23 ms