RNA–Protein interactions for RNA: YLR340W

RPP0, Transcript of Conserved ribosomal protein P0 of the ribosomal stalk, yeastyeast

Gene RPP0, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP0YLR340W PAC11P40960 533 aa4.33□□□□□ -1.72
RPP0YLR340W SEC27P41811 889 aaKnown RBP4.33□□□□□ -1.72
RPP0YLR340W SNO3P43544 222 aa4.33□□□□□ -1.72
RPP0YLR340W PBP1P53297 722 aaKnown RBP4.33□□□□□ -1.72
RPP0YLR340W YNL260CP53846 198 aa4.33□□□□□ -1.72
RPP0YLR340W SPO20Q04359 397 aa4.33□□□□□ -1.72
RPP0YLR340W RCN2Q12044 265 aa4.33□□□□□ -1.72
RPP0YLR340W PUS9Q12069 462 aa4.33□□□□□ -1.72
RPP0YLR340W REX3Q12090 404 aa4.33□□□□□ -1.72
RPP0YLR340W UBX3Q12229 455 aa4.33□□□□□ -1.72
RPP0YLR340W YOR032W-AQ8TGS1 66 aa4.33□□□□□ -1.72
RPP0YLR340W GUK1P15454 187 aaKnown RBP4.32□□□□□ -1.72
RPP0YLR340W TRX2P22803 104 aaKnown RBP4.32□□□□□ -1.72
RPP0YLR340W ZIP1P31111 875 aa4.32□□□□□ -1.72
RPP0YLR340W TOA1P32773 286 aa4.32□□□□□ -1.72
RPP0YLR340W PTM1P32857 523 aa4.32□□□□□ -1.72
RPP0YLR340W DHR2P36009 735 aaPredicted RBP4.32□□□□□ -1.72
RPP0YLR340W ARL1P38116 183 aaKnown RBP4.32□□□□□ -1.72
RPP0YLR340W ALG3P38179 458 aa4.32□□□□□ -1.72
RPP0YLR340W SPC97P38863 823 aa4.32□□□□□ -1.72
RPP0YLR340W BOL3P39724 118 aa4.32□□□□□ -1.72
RPP0YLR340W SEC9P40357 651 aa4.32□□□□□ -1.72
RPP0YLR340W PRM2P40534 656 aa4.32□□□□□ -1.72
RPP0YLR340W MAD2P40958 196 aa4.32□□□□□ -1.72
RPP0YLR340W MET12P46151 657 aa4.32□□□□□ -1.72
RPP0YLR340W BOP3P53958 396 aa4.32□□□□□ -1.72
RPP0YLR340W SDH1Q00711 640 aa4.32□□□□□ -1.72
RPP0YLR340W VPS16Q03308 798 aa4.32□□□□□ -1.72
RPP0YLR340W HAS1Q03532 505 aaKnown RBP4.32□□□□□ -1.72
RPP0YLR340W CRN1Q06440 651 aa4.32□□□□□ -1.72
RPP0YLR340W YLR352WQ06479 807 aa4.32□□□□□ -1.72
RPP0YLR340W YPR174CQ06616 221 aaPredicted RBP4.32□□□□□ -1.72
RPP0YLR340W MCH5Q08777 521 aa4.32□□□□□ -1.72
RPP0YLR340W ZRT2Q12436 422 aa4.32□□□□□ -1.72
RPP0YLR340W PAR32Q12515 295 aaKnown RBP4.32□□□□□ -1.72
RPP0YLR340W DYN1P36022 4092 aa4.31□□□□□ -1.72
RPP0YLR340W BPH1P25356 2167 aa4.31□□□□□ -1.72
RPP0YLR340W GCR1P07261 785 aa4.31□□□□□ -1.72
RPP0YLR340W SSC1P0CS90 654 aaKnown RBP4.31□□□□□ -1.72
RPP0YLR340W HMG1P12683 1054 aa4.31□□□□□ -1.72
RPP0YLR340W ERS1P17261 260 aa4.31□□□□□ -1.72
RPP0YLR340W VPS33P20795 691 aa4.31□□□□□ -1.72
RPP0YLR340W REC107P21651 314 aa4.31□□□□□ -1.72
RPP0YLR340W SPS22P25380 463 aa4.31□□□□□ -1.72
RPP0YLR340W CRM1P30822 1084 aaKnown RBP4.31□□□□□ -1.72
RPP0YLR340W NUP120P35729 1037 aa4.31□□□□□ -1.72
RPP0YLR340W RRN3P36070 627 aa4.31□□□□□ -1.72
RPP0YLR340W YBR071WP38243 211 aa4.31□□□□□ -1.72
RPP0YLR340W APE4P38821 490 aa4.31□□□□□ -1.72
RPP0YLR340W YER034WP40022 185 aaKnown RBP4.31□□□□□ -1.72
RPP0YLR340W CAB2P40506 365 aa4.31□□□□□ -1.72
RPP0YLR340W ECO1P43605 281 aa4.31□□□□□ -1.72
RPP0YLR340W GUS1P46655 708 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
RPP0YLR340W SAE2P46946 345 aa4.31□□□□□ -1.72
RPP0YLR340W STE24P47154 453 aa4.31□□□□□ -1.72
RPP0YLR340W TEL2P53038 688 aa4.31□□□□□ -1.72
RPP0YLR340W BUD32P53323 261 aa4.31□□□□□ -1.72
RPP0YLR340W ALG12P53730 551 aa4.31□□□□□ -1.72
RPP0YLR340W MOT3P54785 490 aaKnown RBP4.31□□□□□ -1.72
RPP0YLR340W CTR9P89105 1077 aa4.31□□□□□ -1.72
RPP0YLR340W NUP116Q02630 1113 aa4.31□□□□□ -1.72
RPP0YLR340W NHP10Q03435 203 aa4.31□□□□□ -1.72
RPP0YLR340W TAF12Q03761 539 aa4.31□□□□□ -1.72
RPP0YLR340W ECI1Q05871 280 aa4.31□□□□□ -1.72
RPP0YLR340W ACM1Q08981 209 aa4.31□□□□□ -1.72
RPP0YLR340W YPL245WQ12179 454 aaKnown RBP4.31□□□□□ -1.72
RPP0YLR340W URA2P07259 2214 aaKnown RBP4.31□□□□□ -1.72
RPP0YLR340W ARG4P04076 463 aaPredicted RBP4.3□□□□□ -1.72
RPP0YLR340W CMD1P06787 147 aaKnown RBP4.3□□□□□ -1.72
RPP0YLR340W GPA2P10823 449 aa4.3□□□□□ -1.72
RPP0YLR340W MAK32P23060 363 aa4.3□□□□□ -1.72
RPP0YLR340W TRX3P25372 127 aa4.3□□□□□ -1.72
RPP0YLR340W MLS1P30952 554 aa4.3□□□□□ -1.72
RPP0YLR340W STO1P34160 861 aaKnown RBP4.3□□□□□ -1.72
RPP0YLR340W HES1P35843 434 aa4.3□□□□□ -1.72
RPP0YLR340W RSM22P36056 628 aa4.3□□□□□ -1.72
RPP0YLR340W CBP4P37267 147 aa4.3□□□□□ -1.72
RPP0YLR340W YBR062CP38239 180 aa4.3□□□□□ -1.72
RPP0YLR340W REI1P38344 393 aaPredicted RBP4.3□□□□□ -1.72
RPP0YLR340W CEP3P40969 608 aa4.3□□□□□ -1.72
RPP0YLR340W UBP6P43593 499 aaKnown RBP4.3□□□□□ -1.72
RPP0YLR340W GCD14P46959 383 aaPredicted RBP4.3□□□□□ -1.72
RPP0YLR340W SDT1P53078 280 aa4.3□□□□□ -1.72
RPP0YLR340W YGR067CP53243 804 aa4.3□□□□□ -1.72
RPP0YLR340W UTP6Q02354 440 aaKnown RBP4.3□□□□□ -1.72
RPP0YLR340W SKI8Q02793 397 aaPredicted RBP4.3□□□□□ -1.72
RPP0YLR340W GAS3Q03655 524 aa4.3□□□□□ -1.72
RPP0YLR340W APC4Q04601 652 aa4.3□□□□□ -1.72
RPP0YLR340W GLO2Q05584 274 aa4.3□□□□□ -1.72
RPP0YLR340W RAD34Q06665 692 aa4.3□□□□□ -1.72
RPP0YLR340W REX4Q08237 289 aa4.3□□□□□ -1.72
RPP0YLR340W YPR064WQ12492 139 aa4.3□□□□□ -1.72
RPP0YLR340W LEU4P06208 619 aaKnown RBP4.29□□□□□ -1.72
RPP0YLR340W CBF1P17106 351 aa4.29□□□□□ -1.72
RPP0YLR340W RPB4P20433 221 aaPredicted RBP4.29□□□□□ -1.72
RPP0YLR340W NPR1P22211 790 aa4.29□□□□□ -1.72
RPP0YLR340W APN1P22936 367 aa4.29□□□□□ -1.72
RPP0YLR340W SEC14P24280 304 aaKnown RBP4.29□□□□□ -1.72
RPP0YLR340W SPB1P25582 841 aaPredicted RBP4.29□□□□□ -1.72
RPP0YLR340W AAD3P25612 363 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms