RNA–Protein interactions for RNA: YLR308W

CDA2, Transcript of Chitin deacetylase, yeast

Gene CDA2, Length 939 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDA2	YLR308W	DCI1	Q08558	271 aa		4.32	□□□□□ -1.72
CDA2	YLR308W	MUM3	Q08750	479 aa		4.32	□□□□□ -1.72
CDA2	YLR308W	RUP1	Q12242	671 aa		4.32	□□□□□ -1.72
CDA2	YLR308W	MTR10	Q99189	972 aa		4.32	□□□□□ -1.72
CDA2	YLR308W	SCEI	P03882	235 aa		4.31	□□□□□ -1.72
CDA2	YLR308W	ATR1	P13090	542 aa		4.31	□□□□□ -1.72
CDA2	YLR308W	BEM1	P29366	551 aa		4.31	□□□□□ -1.72
CDA2	YLR308W	NDC1	P32500	655 aa		4.31	□□□□□ -1.72
CDA2	YLR308W	MDL1	P33310	695 aa		4.31	□□□□□ -1.72
CDA2	YLR308W	ERP1	Q05359	219 aa	Known RBP	4.31	□□□□□ -1.72
CDA2	YLR308W	ISN1	Q99312	450 aa		4.31	□□□□□ -1.72
CDA2	YLR308W	LPD1	P09624	499 aa	Known RBP	4.3	□□□□□ -1.72
CDA2	YLR308W	RPI1	P23250	407 aa	Known RBP	4.3	□□□□□ -1.72
CDA2	YLR308W	RHB1	P25378	209 aa		4.3	□□□□□ -1.72
CDA2	YLR308W	SWI3	P32591	825 aa		4.3	□□□□□ -1.72
CDA2	YLR308W	OLA1	P38219	394 aa	Known RBP	4.3	□□□□□ -1.72
CDA2	YLR308W	CCT2	P39076	527 aa	Known RBP	4.3	□□□□□ -1.72
CDA2	YLR308W	VPS52	P39904	641 aa		4.3	□□□□□ -1.72
CDA2	YLR308W	SHO1	P40073	367 aa		4.3	□□□□□ -1.72
CDA2	YLR308W	YMR147W	P40218	223 aa	Known RBP	4.3	□□□□□ -1.72
CDA2	YLR308W	ALG8	P40351	577 aa		4.3	□□□□□ -1.72
CDA2	YLR308W	GIP3	Q03016	1276 aa		4.3	□□□□□ -1.72
CDA2	YLR308W	TAF12	Q03761	539 aa		4.3	□□□□□ -1.72
CDA2	YLR308W	GYL1	Q04322	720 aa		4.3	□□□□□ -1.72
CDA2	YLR308W	HCR1	Q05775	265 aa	Known RBP	4.3	□□□□□ -1.72
CDA2	YLR308W	MMR1	Q06324	491 aa		4.3	□□□□□ -1.72
CDA2	YLR308W	MRS3	P10566	314 aa		4.29	□□□□□ -1.72
CDA2	YLR308W	ERV1	P27882	189 aa		4.29	□□□□□ -1.72
CDA2	YLR308W	ECM25	P32525	599 aa		4.29	□□□□□ -1.72
CDA2	YLR308W	RRP1	P35178	278 aa	Predicted RBP	4.29	□□□□□ -1.72
CDA2	YLR308W	SWH1	P35845	1188 aa		4.29	□□□□□ -1.72
CDA2	YLR308W	FRE2	P36033	711 aa		4.29	□□□□□ -1.72
CDA2	YLR308W	MDM31	P38880	579 aa		4.29	□□□□□ -1.72
CDA2	YLR308W	ISC1	P40015	477 aa	Known RBP	4.29	□□□□□ -1.72
CDA2	YLR308W	GWT1	P47026	490 aa		4.29	□□□□□ -1.72
CDA2	YLR308W	RTT101	P47050	842 aa		4.29	□□□□□ -1.72
CDA2	YLR308W	TOM22	P49334	152 aa		4.29	□□□□□ -1.72
CDA2	YLR308W	ODC1	Q03028	310 aa		4.29	□□□□□ -1.72
CDA2	YLR308W	YDR387C	Q04162	555 aa		4.29	□□□□□ -1.72
CDA2	YLR308W	SNU66	Q12420	587 aa	Predicted RBP	4.29	□□□□□ -1.72
CDA2	YLR308W	MNE1	P24720	663 aa		4.28	□□□□□ -1.72
CDA2	YLR308W	PRO3	P32263	286 aa	Known RBP	4.28	□□□□□ -1.72
CDA2	YLR308W	NDI1	P32340	513 aa		4.28	□□□□□ -1.72
CDA2	YLR308W	PUP2	P32379	260 aa		4.28	□□□□□ -1.72
CDA2	YLR308W	KRE9	P39005	276 aa		4.28	□□□□□ -1.72
CDA2	YLR308W	YJL132W	P47014	750 aa		4.28	□□□□□ -1.72
CDA2	YLR308W	CAF40	P53829	373 aa		4.28	□□□□□ -1.72
CDA2	YLR308W	OAZ1	Q02803	292 aa		4.28	□□□□□ -1.72
CDA2	YLR308W	MRP51	Q02950	344 aa		4.28	□□□□□ -1.72
CDA2	YLR308W	YMR087W	Q04299	284 aa		4.28	□□□□□ -1.72
CDA2	YLR308W	SPE3	Q12074	293 aa	Known RBP	4.28	□□□□□ -1.72
CDA2	YLR308W	ARG4	P04076	463 aa	Predicted RBP	4.27	□□□□□ -1.73
CDA2	YLR308W	YCR100C	P25606	316 aa		4.27	□□□□□ -1.73
CDA2	YLR308W	SPC110	P32380	944 aa		4.27	□□□□□ -1.73
CDA2	YLR308W	RRN10	P38204	145 aa		4.27	□□□□□ -1.73
CDA2	YLR308W	SEC28	P40509	296 aa	Known RBP	4.27	□□□□□ -1.73
CDA2	YLR308W	YIP1	P53039	248 aa		4.27	□□□□□ -1.73
CDA2	YLR308W	YIF1	P53845	314 aa	Known RBP	4.27	□□□□□ -1.73
CDA2	YLR308W	SCW10	Q04951	389 aa		4.27	□□□□□ -1.73
CDA2	YLR308W	HEL2	Q05580	639 aa	Known RBP	4.27	□□□□□ -1.73
CDA2	YLR308W	YLL056C	Q12177	298 aa		4.27	□□□□□ -1.73
CDA2	YLR308W	GPM3	Q12326	303 aa		4.27	□□□□□ -1.73
CDA2	YLR308W	PAR32	Q12515	295 aa	Known RBP	4.27	□□□□□ -1.73
CDA2	YLR308W	PDE2	P06776	526 aa		4.26	□□□□□ -1.73
CDA2	YLR308W	RPL20A	P0CX23	172 aa	Known RBP	4.26	□□□□□ -1.73
CDA2	YLR308W	RPL20B	P0CX24	172 aa	Predicted RBP	4.26	□□□□□ -1.73
CDA2	YLR308W	PMR1	P13586	950 aa		4.26	□□□□□ -1.73
CDA2	YLR308W	ATS1	P31386	333 aa		4.26	□□□□□ -1.73
CDA2	YLR308W	HSP104	P31539	908 aa	Known RBP	4.26	□□□□□ -1.73
CDA2	YLR308W	RFC3	P38629	340 aa		4.26	□□□□□ -1.73
CDA2	YLR308W	VHS2	P40463	436 aa		4.26	□□□□□ -1.73
CDA2	YLR308W	SAS2	P40963	338 aa		4.26	□□□□□ -1.73
CDA2	YLR308W	PCP1	P53259	346 aa		4.26	□□□□□ -1.73
CDA2	YLR308W	PEX25	Q02969	394 aa		4.26	□□□□□ -1.73
CDA2	YLR308W	RLI1	Q03195	608 aa	Known RBP	4.26	□□□□□ -1.73
CDA2	YLR308W	PPT2	Q12036	173 aa		4.26	□□□□□ -1.73
CDA2	YLR308W	SET6	Q12529	373 aa		4.26	□□□□□ -1.73
CDA2	YLR308W	RPL6B	P05739	176 aa	Known RBP	4.25	□□□□□ -1.73
CDA2	YLR308W	SEC63	P14906	663 aa		4.25	□□□□□ -1.73
CDA2	YLR308W	PMU1	P36069	295 aa		4.25	□□□□□ -1.73
CDA2	YLR308W	YCR041W	P37265	110 aa		4.25	□□□□□ -1.73
CDA2	YLR308W	LYS1	P38998	373 aa	RIP-Chip data	4.25	□□□□□ -1.73	not detected
CDA2	YLR308W	PCF11	P39081	626 aa	Predicted RBP	4.25	□□□□□ -1.73
CDA2	YLR308W	DHH1	P39517	506 aa	Known RBP	4.25	□□□□□ -1.73
CDA2	YLR308W	LCB2	P40970	561 aa		4.25	□□□□□ -1.73
CDA2	YLR308W	TRS85	P46944	698 aa		4.25	□□□□□ -1.73
CDA2	YLR308W	BRO1	P48582	844 aa		4.25	□□□□□ -1.73
CDA2	YLR308W	IBD2	P53892	351 aa		4.25	□□□□□ -1.73
CDA2	YLR308W	EOS1	P53938	366 aa		4.25	□□□□□ -1.73
CDA2	YLR308W	RPL6A	Q02326	176 aa	Known RBP	4.25	□□□□□ -1.73
CDA2	YLR308W	RPN9	Q04062	393 aa	Known RBP	4.25	□□□□□ -1.73
CDA2	YLR308W	PKH2	Q12236	1081 aa	Known RBP	4.25	□□□□□ -1.73
CDA2	YLR308W	RKM5	Q12367	367 aa		4.25	□□□□□ -1.73
CDA2	YLR308W	SPT7	P35177	1332 aa		4.24	□□□□□ -1.73
CDA2	YLR308W	PRP16	P15938	1071 aa	Predicted RBP	4.24	□□□□□ -1.73
CDA2	YLR308W	SPS22	P25380	463 aa		4.24	□□□□□ -1.73
CDA2	YLR308W	PUT3	P25502	979 aa	Predicted RBP	4.24	□□□□□ -1.73
CDA2	YLR308W	SMY1	P32364	656 aa	Known RBP	4.24	□□□□□ -1.73
CDA2	YLR308W	APE4	P38821	490 aa		4.24	□□□□□ -1.73
CDA2	YLR308W	KEL1	P38853	1164 aa	Known RBP	4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms