RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C YMR178WQ03219 274 aaKnown RBP3.14□□□□□ -1.91
SDO1YLR022C RSF1Q05043 376 aa3.14□□□□□ -1.91
SDO1YLR022C YMR034CQ05131 434 aaPredicted RBP3.14□□□□□ -1.91
SDO1YLR022C YDR262WQ12331 272 aa3.14□□□□□ -1.91
SDO1YLR022C PET122P10355 254 aa3.13□□□□□ -1.91
SDO1YLR022C PCT1P13259 424 aa3.13□□□□□ -1.91
SDO1YLR022C RER1P25560 188 aa3.13□□□□□ -1.91
SDO1YLR022C CPR3P25719 182 aa3.13□□□□□ -1.91
SDO1YLR022C MSH1P25846 959 aa3.13□□□□□ -1.91
SDO1YLR022C TOA1P32773 286 aa3.13□□□□□ -1.91
SDO1YLR022C RRN3P36070 627 aa3.13□□□□□ -1.91
SDO1YLR022C YAL037WP39728 267 aa3.13□□□□□ -1.91
SDO1YLR022C DJP1P40564 432 aa3.13□□□□□ -1.91
SDO1YLR022C PHB1P40961 287 aa3.13□□□□□ -1.91
SDO1YLR022C ZIM17P42844 174 aa3.13□□□□□ -1.91
SDO1YLR022C QRI7P43122 407 aa3.13□□□□□ -1.91
SDO1YLR022C RTC4P53850 401 aa3.13□□□□□ -1.91
SDO1YLR022C ARP5P53946 755 aa3.13□□□□□ -1.91
SDO1YLR022C YDR109CQ04585 715 aa3.13□□□□□ -1.91
SDO1YLR022C SWF1Q04629 336 aa3.13□□□□□ -1.91
SDO1YLR022C GLO2Q05584 274 aa3.13□□□□□ -1.91
SDO1YLR022C ATG23Q06671 453 aa3.13□□□□□ -1.91
SDO1YLR022C GRS2Q06817 618 aa3.13□□□□□ -1.91
SDO1YLR022C SFI1Q12369 946 aa3.13□□□□□ -1.91
SDO1YLR022C GIS3Q12418 502 aa3.13□□□□□ -1.91
SDO1YLR022C FOB1O13329 566 aa3.12□□□□□ -1.91
SDO1YLR022C CDC31P06704 161 aaKnown RBP3.12□□□□□ -1.91
SDO1YLR022C GPA1P08539 472 aa3.12□□□□□ -1.91
SDO1YLR022C RPL42AP0CX27 106 aaKnown RBP3.12□□□□□ -1.91
SDO1YLR022C RPL42BP0CX28 106 aaKnown RBP3.12□□□□□ -1.91
SDO1YLR022C OM45P16547 393 aa3.12□□□□□ -1.91
SDO1YLR022C ALG1P16661 449 aa3.12□□□□□ -1.91
SDO1YLR022C URA4P20051 364 aa3.12□□□□□ -1.91
SDO1YLR022C ISY1P21374 235 aaPredicted RBP3.12□□□□□ -1.91
SDO1YLR022C SPR1P32603 445 aa3.12□□□□□ -1.91
SDO1YLR022C YKL023WP36103 277 aaKnown RBP3.12□□□□□ -1.91
SDO1YLR022C NOP4P37838 685 aaKnown RBP3.12□□□□□ -1.91
SDO1YLR022C ARA1P38115 344 aa3.12□□□□□ -1.91
SDO1YLR022C SPO22P40511 975 aa3.12□□□□□ -1.91
SDO1YLR022C MRX6P48564 524 aa3.12□□□□□ -1.91
SDO1YLR022C UBP8P50102 471 aa3.12□□□□□ -1.91
SDO1YLR022C MTG1Q03151 367 aaPredicted RBP3.12□□□□□ -1.91
SDO1YLR022C YET2Q04210 160 aa3.12□□□□□ -1.91
SDO1YLR022C DON1Q05610 365 aa3.12□□□□□ -1.91
SDO1YLR022C YLR281CQ05863 155 aa3.12□□□□□ -1.91
SDO1YLR022C BCY1P07278 416 aaKnown RBP3.11□□□□□ -1.91
SDO1YLR022C MSS18P08593 268 aa3.11□□□□□ -1.91
SDO1YLR022C CDC24P11433 854 aaPredicted RBP3.11□□□□□ -1.91
SDO1YLR022C ARP2P32381 391 aaKnown RBP3.11□□□□□ -1.91
SDO1YLR022C NIP1P32497 812 aaKnown RBP3.11□□□□□ -1.91
SDO1YLR022C RPS0AP32905 252 aaKnown RBP3.11□□□□□ -1.91
SDO1YLR022C MNN2P38069 597 aa3.11□□□□□ -1.91
SDO1YLR022C FSH1P38777 243 aaKnown RBP3.11□□□□□ -1.91
SDO1YLR022C MET30P39014 640 aa3.11□□□□□ -1.91
SDO1YLR022C CCT4P39078 528 aaKnown RBP3.11□□□□□ -1.91
SDO1YLR022C SPC72P39723 622 aa3.11□□□□□ -1.91
SDO1YLR022C YIL169CP40442 995 aa3.11□□□□□ -1.91
SDO1YLR022C RPS10BP46784 105 aaKnown RBP3.11□□□□□ -1.91
SDO1YLR022C GLG2P47011 380 aa3.11□□□□□ -1.91
SDO1YLR022C TIM8P57744 87 aa3.11□□□□□ -1.91
SDO1YLR022C BET4Q00618 327 aa3.11□□□□□ -1.91
SDO1YLR022C RPA49Q01080 415 aaPredicted RBP3.11□□□□□ -1.91
SDO1YLR022C BLS1Q06071 122 aa3.11□□□□□ -1.91
SDO1YLR022C YLR030WQ07967 263 aa3.11□□□□□ -1.91
SDO1YLR022C RPS10AQ08745 105 aaPredicted RBP3.11□□□□□ -1.91
SDO1YLR022C YOL087CQ99247 1116 aa3.11□□□□□ -1.91
SDO1YLR022C HSP82P02829 709 aaKnown RBP3.1□□□□□ -1.91
SDO1YLR022C MIS1P09440 975 aaKnown RBP3.1□□□□□ -1.91
SDO1YLR022C YML003WP0CF16 290 aa3.1□□□□□ -1.91
SDO1YLR022C MATALPHA2P0CY08 210 aa3.1□□□□□ -1.91
SDO1YLR022C HMLALPHA2P0CY09 210 aa3.1□□□□□ -1.91
SDO1YLR022C MRP2P10663 115 aaPredicted RBP3.1□□□□□ -1.91
SDO1YLR022C SCL1P21243 252 aaKnown RBP3.1□□□□□ -1.91
SDO1YLR022C GRR1P24814 1151 aa3.1□□□□□ -1.91
SDO1YLR022C YSP3P25036 478 aa3.1□□□□□ -1.91
SDO1YLR022C RDS1P25611 832 aa3.1□□□□□ -1.91
SDO1YLR022C YIH1P25637 258 aa3.1□□□□□ -1.91
SDO1YLR022C RFA2P26754 273 aaKnown RBP3.1□□□□□ -1.91
SDO1YLR022C MCM10P32354 571 aa3.1□□□□□ -1.91
SDO1YLR022C NFU1P32860 256 aa3.1□□□□□ -1.91
SDO1YLR022C SOL2P37262 315 aa3.1□□□□□ -1.91
SDO1YLR022C PSY4P38193 441 aa3.1□□□□□ -1.91
SDO1YLR022C RKM3P38222 552 aa3.1□□□□□ -1.91
SDO1YLR022C RTT107P38850 1070 aa3.1□□□□□ -1.91
SDO1YLR022C LCB2P40970 561 aa3.1□□□□□ -1.91
SDO1YLR022C ELP2P42935 788 aa3.1□□□□□ -1.91
SDO1YLR022C NBP1P52919 319 aaPredicted RBP3.1□□□□□ -1.91
SDO1YLR022C MND1P53102 219 aa3.1□□□□□ -1.91
SDO1YLR022C YTP1P53584 459 aa3.1□□□□□ -1.91
SDO1YLR022C YDR541CQ03049 344 aa3.1□□□□□ -1.91
SDO1YLR022C AIM32Q04689 311 aa3.1□□□□□ -1.91
SDO1YLR022C TAF9Q05027 157 aa3.1□□□□□ -1.91
SDO1YLR022C ARP9Q05123 467 aa3.1□□□□□ -1.91
SDO1YLR022C POS5Q06892 414 aa3.1□□□□□ -1.91
SDO1YLR022C FRE3Q08905 711 aa3.1□□□□□ -1.91
SDO1YLR022C APL5Q08951 932 aaKnown RBP3.1□□□□□ -1.91
SDO1YLR022C VPS54Q12071 889 aa3.1□□□□□ -1.91
SDO1YLR022C MED1Q12321 566 aa3.1□□□□□ -1.91
SDO1YLR022C PEX11Q12462 236 aa3.1□□□□□ -1.91
SDO1YLR022C PAB1P04147 577 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91 RIP-Chip
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms