RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C VTA1Q06263 330 aa3.05□□□□□ -1.92
YPT52YKR014C TSR2Q06672 205 aaKnown RBP3.05□□□□□ -1.92
YPT52YKR014C TIM18Q08749 192 aa3.05□□□□□ -1.92
YPT52YKR014C CKA1P15790 372 aa3.04□□□□□ -1.92
YPT52YKR014C TIP1P27654 210 aaPredicted RBP3.04□□□□□ -1.92
YPT52YKR014C YIM1P28625 365 aa3.04□□□□□ -1.92
YPT52YKR014C NIP100P33420 868 aa3.04□□□□□ -1.92
YPT52YKR014C RFS1P38234 210 aaKnown RBP3.04□□□□□ -1.92
YPT52YKR014C VHC1P38329 1120 aa3.04□□□□□ -1.92
YPT52YKR014C RRT2P38332 387 aa3.04□□□□□ -1.92
YPT52YKR014C MST28P39552 234 aa3.04□□□□□ -1.92
YPT52YKR014C REE1P40893 198 aa3.04□□□□□ -1.92
YPT52YKR014C NCA3P46955 337 aa3.04□□□□□ -1.92
YPT52YKR014C MNP1P53163 194 aaPredicted RBP3.04□□□□□ -1.92
YPT52YKR014C YGL039WP53183 348 aaKnown RBP3.04□□□□□ -1.92
YPT52YKR014C YIF1P53845 314 aaKnown RBP3.04□□□□□ -1.92
YPT52YKR014C HER2Q03557 464 aa3.04□□□□□ -1.92
YPT52YKR014C RAD61Q99359 647 aa3.04□□□□□ -1.92
YPT52YKR014C PET123P17558 318 aa3.03□□□□□ -1.92
YPT52YKR014C CLC1P17891 233 aa3.03□□□□□ -1.92
YPT52YKR014C RPI1P23250 407 aaKnown RBP3.03□□□□□ -1.92
YPT52YKR014C DAL2P25335 343 aa3.03□□□□□ -1.92
YPT52YKR014C PRP21P32524 280 aaPredicted RBP3.03□□□□□ -1.92
YPT52YKR014C ECM25P32525 599 aa3.03□□□□□ -1.92
YPT52YKR014C MTC6P38849 526 aa3.03□□□□□ -1.92
YPT52YKR014C SMF1P38925 575 aa3.03□□□□□ -1.92
YPT52YKR014C FAA2P39518 744 aa3.03□□□□□ -1.92
YPT52YKR014C ESL1P40456 1118 aa3.03□□□□□ -1.92
YPT52YKR014C PRM5P40476 318 aa3.03□□□□□ -1.92
YPT52YKR014C PEX25Q02969 394 aa3.03□□□□□ -1.92
YPT52YKR014C YMR181CQ03231 154 aa3.03□□□□□ -1.92
YPT52YKR014C HRI1Q05905 244 aaKnown RBP3.03□□□□□ -1.92
YPT52YKR014C REX4Q08237 289 aa3.03□□□□□ -1.92
YPT52YKR014C TMS1Q12116 473 aa3.03□□□□□ -1.92
YPT52YKR014C ARG4P04076 463 aaPredicted RBP3.02□□□□□ -1.93
YPT52YKR014C MET17P06106 444 aa3.02□□□□□ -1.93
YPT52YKR014C RPL3P14126 387 aaKnown RBP3.02□□□□□ -1.93
YPT52YKR014C HCS1P34243 683 aa3.02□□□□□ -1.93
YPT52YKR014C PIM1P36775 1133 aa3.02□□□□□ -1.93
YPT52YKR014C YHR054CP38780 354 aa3.02□□□□□ -1.93
YPT52YKR014C IRC6P43615 237 aa3.02□□□□□ -1.93
YPT52YKR014C FMS1P50264 508 aa3.02□□□□□ -1.93
YPT52YKR014C MRPL19P53875 158 aa3.02□□□□□ -1.93
YPT52YKR014C TMC1Q08422 150 aaPredicted RBP3.02□□□□□ -1.93
YPT52YKR014C SGT1Q08446 395 aa3.02□□□□□ -1.93
YPT52YKR014C HSP42Q12329 375 aa3.02□□□□□ -1.93
YPT52YKR014C GRX6Q12438 231 aa3.02□□□□□ -1.93
YPT52YKR014C YLR278CQ05854 1341 aa3.01□□□□□ -1.93
YPT52YKR014C PPH22P23595 377 aa3.01□□□□□ -1.93
YPT52YKR014C RVS161P25343 265 aaKnown RBP3.01□□□□□ -1.93
YPT52YKR014C MNS1P32906 549 aa3.01□□□□□ -1.93
YPT52YKR014C LYS1P38998 373 aaRIP-Chip data3.01□□□□□ -1.93not detected
YPT52YKR014C CCT2P39076 527 aaKnown RBP3.01□□□□□ -1.93
YPT52YKR014C NOC2P39744 710 aaKnown RBP3.01□□□□□ -1.93
YPT52YKR014C FRE4P53746 719 aa3.01□□□□□ -1.93
YPT52YKR014C MDM1Q01846 1127 aa3.01□□□□□ -1.93
YPT52YKR014C PPM1Q04081 328 aa3.01□□□□□ -1.93
YPT52YKR014C YPR022CQ12139 1133 aa3.01□□□□□ -1.93
YPT52YKR014C HRT3Q12347 344 aa3.01□□□□□ -1.93
YPT52YKR014C RRD2Q12461 358 aa3.01□□□□□ -1.93
YPT52YKR014C INH1P01097 85 aa3□□□□□ -1.93
YPT52YKR014C TEF1P02994 458 aaKnown RBP3□□□□□ -1.93
YPT52YKR014C CLN3P13365 580 aa3□□□□□ -1.93
YPT52YKR014C SRV2P17555 526 aaKnown RBP3□□□□□ -1.93
YPT52YKR014C CLB3P24870 427 aa3□□□□□ -1.93
YPT52YKR014C ARA1P38115 344 aa3□□□□□ -1.93
YPT52YKR014C PAN6P40459 309 aa3□□□□□ -1.93
YPT52YKR014C YNR048WP53740 393 aa3□□□□□ -1.93
YPT52YKR014C CWC25P53854 179 aaKnown RBP3□□□□□ -1.93
YPT52YKR014C YMR027WQ04371 470 aa3□□□□□ -1.93
YPT52YKR014C RIP1P08067 215 aa2.99□□□□□ -1.93
YPT52YKR014C ISY1P21374 235 aaPredicted RBP2.99□□□□□ -1.93
YPT52YKR014C SLY1P22213 666 aa2.99□□□□□ -1.93
YPT52YKR014C ROX1P25042 368 aa2.99□□□□□ -1.93
YPT52YKR014C JNM1P36224 373 aa2.99□□□□□ -1.93
YPT52YKR014C SWD3P38123 315 aa2.99□□□□□ -1.93
YPT52YKR014C NTC20P38302 140 aaPredicted RBP2.99□□□□□ -1.93
YPT52YKR014C DED81P38707 554 aaKnown RBP2.99□□□□□ -1.93
YPT52YKR014C NDE1P40215 560 aa2.99□□□□□ -1.93
YPT52YKR014C DLD2P46681 530 aaKnown RBP2.99□□□□□ -1.93
YPT52YKR014C MHR1Q06630 226 aa2.99□□□□□ -1.93
YPT52YKR014C MRPL35Q06678 367 aa2.99□□□□□ -1.93
YPT52YKR014C SNX3Q08826 162 aaKnown RBP2.99□□□□□ -1.93
YPT52YKR014C RTP1Q12751 981 aa2.99□□□□□ -1.93
YPT52YKR014C ADH2P00331 348 aaKnown RBP2.98□□□□□ -1.93
YPT52YKR014C RED1P14291 827 aa2.98□□□□□ -1.93
YPT52YKR014C SPO7P18410 259 aa2.98□□□□□ -1.93
YPT52YKR014C HXT3P32466 567 aaKnown RBP2.98□□□□□ -1.93
YPT52YKR014C MUD1P32605 298 aaKnown RBP2.98□□□□□ -1.93
YPT52YKR014C KKQ8P36004 724 aa2.98□□□□□ -1.93
YPT52YKR014C VMA13P41807 478 aaKnown RBP2.98□□□□□ -1.93
YPT52YKR014C YJR011CP47086 261 aaPredicted RBP2.98□□□□□ -1.93
YPT52YKR014C HMS2P47175 358 aa2.98□□□□□ -1.93
YPT52YKR014C SHY1P53266 389 aa2.98□□□□□ -1.93
YPT52YKR014C HXT11P54862 567 aa2.98□□□□□ -1.93
YPT52YKR014C BET5Q03630 159 aa2.98□□□□□ -1.93
YPT52YKR014C RRP45Q05636 305 aaKnown RBP2.98□□□□□ -1.93
YPT52YKR014C WTM1Q12363 437 aaKnown RBP2.98□□□□□ -1.93
YPT52YKR014C LSB5P25369 354 aa2.97□□□□□ -1.93
YPT52YKR014C CDC60P26637 1090 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms