RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W HSP104P31539 908 aaKnown RBP4.09□□□□□ -1.75
PTM1YKL039W ATP11P32453 318 aa4.09□□□□□ -1.75
PTM1YKL039W SWE1P32944 819 aa4.09□□□□□ -1.75
PTM1YKL039W PMU1P36069 295 aa4.09□□□□□ -1.75
PTM1YKL039W HAT2P39984 401 aa4.09□□□□□ -1.75
PTM1YKL039W SHO1P40073 367 aa4.09□□□□□ -1.75
PTM1YKL039W RPT6Q01939 405 aaKnown RBP4.09□□□□□ -1.75
PTM1YKL039W IRC15Q02733 499 aa4.09□□□□□ -1.75
PTM1YKL039W YDL007C-AQ2V2Q0 85 aa4.09□□□□□ -1.75
PTM1YKL039W MES1P00958 751 aaKnown RBP4.08□□□□□ -1.76
PTM1YKL039W CST26P38226 397 aa4.08□□□□□ -1.76
PTM1YKL039W ERP2P39704 215 aa4.08□□□□□ -1.76
PTM1YKL039W ROK1P45818 564 aaPredicted RBP4.08□□□□□ -1.76
PTM1YKL039W GIS2P53849 153 aaKnown RBP RIP-Chip data4.08□□□□□ -1.76not detected
PTM1YKL039W MRD1Q06106 887 aaKnown RBP4.08□□□□□ -1.76
PTM1YKL039W VPS74Q06385 345 aa4.08□□□□□ -1.76
PTM1YKL039W RKM5Q12367 367 aa4.08□□□□□ -1.76
PTM1YKL039W SSK22P25390 1331 aaPredicted RBP4.07□□□□□ -1.76
PTM1YKL039W CYB2P00175 591 aa4.07□□□□□ -1.76
PTM1YKL039W ARG3P05150 338 aa4.07□□□□□ -1.76
PTM1YKL039W ATR1P13090 542 aa4.07□□□□□ -1.76
PTM1YKL039W ALG8P40351 577 aa4.07□□□□□ -1.76
PTM1YKL039W YGR117CP53270 476 aa4.07□□□□□ -1.76
PTM1YKL039W TLG2Q08144 397 aa4.07□□□□□ -1.76
PTM1YKL039W SEC39Q12745 709 aa4.07□□□□□ -1.76
PTM1YKL039W RPL31BP0C2H9 113 aaKnown RBP4.06□□□□□ -1.76
PTM1YKL039W GLK1P17709 500 aaKnown RBP4.06□□□□□ -1.76
PTM1YKL039W EXO70P19658 623 aa4.06□□□□□ -1.76
PTM1YKL039W RNA14P25298 677 aaKnown RBP4.06□□□□□ -1.76
PTM1YKL039W PUT3P25502 979 aaPredicted RBP4.06□□□□□ -1.76
PTM1YKL039W YMR147WP40218 223 aaKnown RBP4.06□□□□□ -1.76
PTM1YKL039W MET18P40469 1032 aa4.06□□□□□ -1.76
PTM1YKL039W GWT1P47026 490 aa4.06□□□□□ -1.76
PTM1YKL039W YDR239CQ03780 787 aa4.06□□□□□ -1.76
PTM1YKL039W PDS5Q04264 1277 aa4.06□□□□□ -1.76
PTM1YKL039W LYS2P07702 1392 aa4.06□□□□□ -1.76
PTM1YKL039W TUL1P36096 758 aa4.06□□□□□ -1.76
PTM1YKL039W TIF5P38431 405 aaKnown RBP4.06□□□□□ -1.76
PTM1YKL039W BOR1P53838 576 aa4.06□□□□□ -1.76
PTM1YKL039W SYF1Q04048 859 aaPredicted RBP4.06□□□□□ -1.76
PTM1YKL039W VPS13Q07878 3144 aa4.05□□□□□ -1.76
PTM1YKL039W MRP7P12687 371 aa4.05□□□□□ -1.76
PTM1YKL039W IME2P32581 645 aa4.05□□□□□ -1.76
PTM1YKL039W APE3P37302 537 aaKnown RBP4.05□□□□□ -1.76
PTM1YKL039W PCA1P38360 1216 aa4.05□□□□□ -1.76
PTM1YKL039W SYG1P40528 902 aa4.05□□□□□ -1.76
PTM1YKL039W TWF1P53250 332 aa4.05□□□□□ -1.76
PTM1YKL039W SUB1P54000 292 aaKnown RBP4.05□□□□□ -1.76
PTM1YKL039W ATG29Q12092 213 aa4.05□□□□□ -1.76
PTM1YKL039W CTF3Q12748 733 aa4.05□□□□□ -1.76
PTM1YKL039W BRR1Q99177 341 aaPredicted RBP4.05□□□□□ -1.76
PTM1YKL039W MFT1P33441 392 aaKnown RBP4.04□□□□□ -1.76
PTM1YKL039W SEC66P33754 206 aa4.04□□□□□ -1.76
PTM1YKL039W AVT5P38176 459 aa4.04□□□□□ -1.76
PTM1YKL039W ESL1P40456 1118 aa4.04□□□□□ -1.76
PTM1YKL039W IDP2P41939 412 aa4.04□□□□□ -1.76
PTM1YKL039W ELP2P42935 788 aa4.04□□□□□ -1.76
PTM1YKL039W IRC6P43615 237 aa4.04□□□□□ -1.76
PTM1YKL039W YJL132WP47014 750 aa4.04□□□□□ -1.76
PTM1YKL039W TCB2P48231 1178 aa4.04□□□□□ -1.76
PTM1YKL039W JJJ1P53863 590 aa4.04□□□□□ -1.76
PTM1YKL039W ARK1P53974 638 aa4.04□□□□□ -1.76
PTM1YKL039W TRM44Q02648 567 aaKnown RBP4.04□□□□□ -1.76
PTM1YKL039W YLL056CQ12177 298 aa4.04□□□□□ -1.76
PTM1YKL039W RRD2Q12461 358 aa4.04□□□□□ -1.76
PTM1YKL039W GSC2P40989 1895 aa4.03□□□□□ -1.76
PTM1YKL039W BUB3P26449 341 aa4.03□□□□□ -1.76
PTM1YKL039W GPI10P30777 616 aa4.03□□□□□ -1.76
PTM1YKL039W FAU1P40099 211 aa4.03□□□□□ -1.76
PTM1YKL039W OCA1P50946 238 aaPredicted RBP4.03□□□□□ -1.76
PTM1YKL039W YGL108CP53139 140 aa4.03□□□□□ -1.76
PTM1YKL039W WSC2P53832 503 aa4.03□□□□□ -1.76
PTM1YKL039W ALE1Q08548 619 aa4.03□□□□□ -1.76
PTM1YKL039W YCL021W-AQ96VH3 125 aa4.03□□□□□ -1.76
PTM1YKL039W RPP0P05317 312 aaKnown RBP4.02□□□□□ -1.77
PTM1YKL039W HPR1P17629 752 aaKnown RBP4.02□□□□□ -1.77
PTM1YKL039W CMC1P36064 111 aa4.02□□□□□ -1.77
PTM1YKL039W VID24P38263 362 aa4.02□□□□□ -1.77
PTM1YKL039W GCD10P41814 478 aa4.02□□□□□ -1.77
PTM1YKL039W UBX2Q04228 584 aa4.02□□□□□ -1.77
PTM1YKL039W PMT1P33775 817 aa4.02□□□□□ -1.77
PTM1YKL039W UTP9P38882 575 aaKnown RBP4.02□□□□□ -1.77
PTM1YKL039W ARF3P40994 183 aaRIP-Chip data4.02□□□□□ -1.77not detected
PTM1YKL039W MSO1P53604 210 aaKnown RBP4.02□□□□□ -1.77
PTM1YKL039W YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
PTM1YKL039W CBS2P14905 389 aa4.01□□□□□ -1.77
PTM1YKL039W NDE1P40215 560 aa4.01□□□□□ -1.77
PTM1YKL039W VMA13P41807 478 aaKnown RBP4.01□□□□□ -1.77
PTM1YKL039W POP1P41812 875 aa4.01□□□□□ -1.77
PTM1YKL039W HXT14P42833 540 aa4.01□□□□□ -1.77
PTM1YKL039W URB2P47108 1174 aa4.01□□□□□ -1.77
PTM1YKL039W KTR5P53966 522 aaPredicted RBP4.01□□□□□ -1.77
PTM1YKL039W RIM20Q12033 661 aa4.01□□□□□ -1.77
PTM1YKL039W RRG1Q12167 365 aaPredicted RBP4.01□□□□□ -1.77
PTM1YKL039W PMR1P13586 950 aa4□□□□□ -1.77
PTM1YKL039W YOX1P34161 385 aa4□□□□□ -1.77
PTM1YKL039W OPY1P38271 328 aa4□□□□□ -1.77
PTM1YKL039W RQC1Q05468 723 aaKnown RBP4□□□□□ -1.77
PTM1YKL039W HNT3Q08702 217 aa4□□□□□ -1.77
PTM1YKL039W QCR6P00127 147 aa3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms