RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A URB2P47108 1174 aa2.93□□□□□ -1.94
SFT1YKL006C-A VPS9P54787 451 aa2.93□□□□□ -1.94
SFT1YKL006C-A ELP3Q02908 557 aaKnown RBP2.93□□□□□ -1.94
SFT1YKL006C-A YDR239CQ03780 787 aa2.93□□□□□ -1.94
SFT1YKL006C-A KEL3Q08979 651 aaPredicted RBP2.93□□□□□ -1.94
SFT1YKL006C-A RIM20Q12033 661 aa2.93□□□□□ -1.94
SFT1YKL006C-A ISN1Q99312 450 aa2.93□□□□□ -1.94
SFT1YKL006C-A LEU4P06208 619 aaKnown RBP2.92□□□□□ -1.94
SFT1YKL006C-A RRP7P25368 297 aaPredicted RBP2.92□□□□□ -1.94
SFT1YKL006C-A YCR100CP25606 316 aa2.92□□□□□ -1.94
SFT1YKL006C-A URA7P28274 579 aaKnown RBP2.92□□□□□ -1.94
SFT1YKL006C-A BRF1P29056 596 aa2.92□□□□□ -1.94
SFT1YKL006C-A CRM1P30822 1084 aaKnown RBP2.92□□□□□ -1.94
SFT1YKL006C-A WBP1P33767 430 aaKnown RBP2.92□□□□□ -1.94
SFT1YKL006C-A SSU1P41930 458 aa2.92□□□□□ -1.94
SFT1YKL006C-A YJL055WP47044 245 aa2.92□□□□□ -1.94
SFT1YKL006C-A POP6P53218 158 aa2.92□□□□□ -1.94
SFT1YKL006C-A ART5P53244 586 aaKnown RBP2.92□□□□□ -1.94
SFT1YKL006C-A OGG1P53397 376 aaPredicted RBP2.92□□□□□ -1.94
SFT1YKL006C-A ARK1P53974 638 aa2.92□□□□□ -1.94
SFT1YKL006C-A PEX25Q02969 394 aa2.92□□□□□ -1.94
SFT1YKL006C-A MRD1Q06106 887 aaKnown RBP2.92□□□□□ -1.94
SFT1YKL006C-A CUE5Q08412 411 aaKnown RBP2.92□□□□□ -1.94
SFT1YKL006C-A ESA1Q08649 445 aa2.92□□□□□ -1.94
SFT1YKL006C-A YPL199CQ08954 240 aa2.92□□□□□ -1.94
SFT1YKL006C-A THP3Q12049 470 aaKnown RBP2.92□□□□□ -1.94
SFT1YKL006C-A SMF3Q12078 473 aaPredicted RBP2.92□□□□□ -1.94
SFT1YKL006C-A RPL31BP0C2H9 113 aaKnown RBP2.91□□□□□ -1.94
SFT1YKL006C-A YAR066WP0CX18 203 aa2.91□□□□□ -1.94
SFT1YKL006C-A YHR214WP0CX19 203 aa2.91□□□□□ -1.94
SFT1YKL006C-A MDH1P17505 334 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
SFT1YKL006C-A CPR4P25334 318 aa2.91□□□□□ -1.94
SFT1YKL006C-A PRD1P25375 712 aa2.91□□□□□ -1.94
SFT1YKL006C-A ATP11P32453 318 aa2.91□□□□□ -1.94
SFT1YKL006C-A CST26P38226 397 aa2.91□□□□□ -1.94
SFT1YKL006C-A RFS1P38234 210 aaKnown RBP2.91□□□□□ -1.94
SFT1YKL006C-A VID24P38263 362 aa2.91□□□□□ -1.94
SFT1YKL006C-A RRT2P38332 387 aa2.91□□□□□ -1.94
SFT1YKL006C-A POP2P39008 433 aa2.91□□□□□ -1.94
SFT1YKL006C-A GDI1P39958 451 aaKnown RBP2.91□□□□□ -1.94
SFT1YKL006C-A MEP1P40260 492 aa2.91□□□□□ -1.94
SFT1YKL006C-A SYG1P40528 902 aa2.91□□□□□ -1.94
SFT1YKL006C-A GCD10P41814 478 aa2.91□□□□□ -1.94
SFT1YKL006C-A ZIM17P42844 174 aa2.91□□□□□ -1.94
SFT1YKL006C-A YGR210CP42942 411 aa2.91□□□□□ -1.94
SFT1YKL006C-A WWM1P43582 211 aaKnown RBP2.91□□□□□ -1.94
SFT1YKL006C-A TCB2P48231 1178 aa2.91□□□□□ -1.94
SFT1YKL006C-A GPI8P49018 411 aa2.91□□□□□ -1.94
SFT1YKL006C-A OCA1P50946 238 aaPredicted RBP2.91□□□□□ -1.94
SFT1YKL006C-A SDT1P53078 280 aa2.91□□□□□ -1.94
SFT1YKL006C-A RPA49Q01080 415 aaPredicted RBP2.91□□□□□ -1.94
SFT1YKL006C-A OAZ1Q02803 292 aa2.91□□□□□ -1.94
SFT1YKL006C-A PRP42Q03776 544 aaKnown RBP2.91□□□□□ -1.94
SFT1YKL006C-A ARX1Q03862 593 aaKnown RBP2.91□□□□□ -1.94
SFT1YKL006C-A GYL1Q04322 720 aa2.91□□□□□ -1.94
SFT1YKL006C-A ATG29Q12092 213 aa2.91□□□□□ -1.94
SFT1YKL006C-A YLR108CQ12259 485 aa2.91□□□□□ -1.94
SFT1YKL006C-A YCR051WP25631 222 aa2.9□□□□□ -1.95
SFT1YKL006C-A SDH3P33421 198 aa2.9□□□□□ -1.95
SFT1YKL006C-A APE3P37302 537 aaKnown RBP2.9□□□□□ -1.95
SFT1YKL006C-A PTH1P38876 190 aaKnown RBP2.9□□□□□ -1.95
SFT1YKL006C-A VMA13P41807 478 aaKnown RBP2.9□□□□□ -1.95
SFT1YKL006C-A PET130P47065 347 aa2.9□□□□□ -1.95
SFT1YKL006C-A HOT1Q03213 719 aa2.9□□□□□ -1.95
SFT1YKL006C-A PDS5Q04264 1277 aa2.9□□□□□ -1.95
SFT1YKL006C-A RQC1Q05468 723 aaKnown RBP2.9□□□□□ -1.95
SFT1YKL006C-A TMC1Q08422 150 aaPredicted RBP2.9□□□□□ -1.95
SFT1YKL006C-A NFI1Q12216 726 aa2.9□□□□□ -1.95
SFT1YKL006C-A ERV2Q12284 196 aa2.9□□□□□ -1.95
SFT1YKL006C-A SAM1P10659 382 aaKnown RBP2.89□□□□□ -1.95
SFT1YKL006C-A SAM2P19358 384 aaKnown RBP2.89□□□□□ -1.95
SFT1YKL006C-A REC107P21651 314 aa2.89□□□□□ -1.95
SFT1YKL006C-A ERV1P27882 189 aa2.89□□□□□ -1.95
SFT1YKL006C-A YIM1P28625 365 aa2.89□□□□□ -1.95
SFT1YKL006C-A MRE11P32829 692 aa2.89□□□□□ -1.95
SFT1YKL006C-A EFM4P40516 257 aa2.89□□□□□ -1.95
SFT1YKL006C-A RRT5P43607 289 aa2.89□□□□□ -1.95
SFT1YKL006C-A IBD2P53892 351 aa2.89□□□□□ -1.95
SFT1YKL006C-A PNG1Q02890 363 aa2.89□□□□□ -1.95
SFT1YKL006C-A ODC1Q03028 310 aa2.89□□□□□ -1.95
SFT1YKL006C-A ROY1Q04847 553 aa2.89□□□□□ -1.95
SFT1YKL006C-A TSR1Q07381 788 aaKnown RBP2.89□□□□□ -1.95
SFT1YKL006C-A MUM3Q08750 479 aa2.89□□□□□ -1.95
SFT1YKL006C-A RRG7Q08774 242 aaPredicted RBP2.89□□□□□ -1.95
SFT1YKL006C-A TMS1Q12116 473 aa2.89□□□□□ -1.95
SFT1YKL006C-A YDL007C-AQ2V2Q0 85 aa2.89□□□□□ -1.95
SFT1YKL006C-A AFI1Q99222 893 aa2.89□□□□□ -1.95
SFT1YKL006C-A SUP35P05453 685 aaKnown RBP2.88□□□□□ -1.95
SFT1YKL006C-A CPR2P23285 205 aa2.88□□□□□ -1.95
SFT1YKL006C-A SNT1P25357 1226 aa2.88□□□□□ -1.95
SFT1YKL006C-A POT1P27796 417 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
SFT1YKL006C-A ARO2P28777 376 aaKnown RBP2.88□□□□□ -1.95
SFT1YKL006C-A THI2P38141 450 aa2.88□□□□□ -1.95
SFT1YKL006C-A OTU2P38747 307 aaKnown RBP2.88□□□□□ -1.95
SFT1YKL006C-A BUD27P43573 796 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
SFT1YKL006C-A MDE1P47095 244 aa2.88□□□□□ -1.95
SFT1YKL006C-A TOF1P53840 1238 aa2.88□□□□□ -1.95
SFT1YKL006C-A YPL107WQ02873 248 aa2.88□□□□□ -1.95
SFT1YKL006C-A PRP3Q03338 469 aaPredicted RBP2.88□□□□□ -1.95
SFT1YKL006C-A YDR341CQ05506 607 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms