RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W AIM22P47051 409 aa2.14□□□□□ -2.07
MSL1YIR009W MDE1P47095 244 aa2.14□□□□□ -2.07
MSL1YIR009W ZPR1P53303 486 aaKnown RBP2.14□□□□□ -2.07
MSL1YIR009W BUD32P53323 261 aa2.14□□□□□ -2.07
MSL1YIR009W SMM1P53720 384 aaKnown RBP2.14□□□□□ -2.07
MSL1YIR009W HOT1Q03213 719 aa2.14□□□□□ -2.07
MSL1YIR009W YMR130WQ04223 302 aa2.14□□□□□ -2.07
MSL1YIR009W YDR341CQ05506 607 aaKnown RBP2.14□□□□□ -2.07
MSL1YIR009W DIS3Q08162 1001 aaKnown RBP2.14□□□□□ -2.07
MSL1YIR009W SET6Q12529 373 aa2.14□□□□□ -2.07
MSL1YIR009W YLR278CQ05854 1341 aa2.14□□□□□ -2.07
MSL1YIR009W HSL1P34244 1518 aa2.13□□□□□ -2.07
MSL1YIR009W TY1B-AO13527 1196 aaKnown RBP2.13□□□□□ -2.07
MSL1YIR009W PUT2P07275 575 aa2.13□□□□□ -2.07
MSL1YIR009W SPS4P09937 338 aa2.13□□□□□ -2.07
MSL1YIR009W SPO7P18410 259 aa2.13□□□□□ -2.07
MSL1YIR009W BRF1P29056 596 aa2.13□□□□□ -2.07
MSL1YIR009W PUP2P32379 260 aa2.13□□□□□ -2.07
MSL1YIR009W SHP1P34223 423 aa2.13□□□□□ -2.07
MSL1YIR009W MTR2P34232 184 aaKnown RBP2.13□□□□□ -2.07
MSL1YIR009W HEL1P36113 551 aa2.13□□□□□ -2.07
MSL1YIR009W TIF5P38431 405 aaKnown RBP2.13□□□□□ -2.07
MSL1YIR009W KEL1P38853 1164 aaKnown RBP2.13□□□□□ -2.07
MSL1YIR009W MBB1P39534 108 aa2.13□□□□□ -2.07
MSL1YIR009W PES4P39684 611 aa2.13□□□□□ -2.07
MSL1YIR009W TIF4631P39935 952 aaKnown RBP2.13□□□□□ -2.07
MSL1YIR009W YTA12P40341 825 aa2.13□□□□□ -2.07
MSL1YIR009W VMA13P41807 478 aaKnown RBP2.13□□□□□ -2.07
MSL1YIR009W POP1P41812 875 aa2.13□□□□□ -2.07
MSL1YIR009W URB2P47108 1174 aa2.13□□□□□ -2.07
MSL1YIR009W COS5P47187 383 aa2.13□□□□□ -2.07
MSL1YIR009W FMS1P50264 508 aa2.13□□□□□ -2.07
MSL1YIR009W OCA1P50946 238 aaPredicted RBP2.13□□□□□ -2.07
MSL1YIR009W YGL108CP53139 140 aa2.13□□□□□ -2.07
MSL1YIR009W TOF1P53840 1238 aa2.13□□□□□ -2.07
MSL1YIR009W OCA2P53949 197 aa2.13□□□□□ -2.07
MSL1YIR009W KTR5P53966 522 aaPredicted RBP2.13□□□□□ -2.07
MSL1YIR009W SKO1Q02100 647 aa2.13□□□□□ -2.07
MSL1YIR009W SHR3Q02774 210 aa2.13□□□□□ -2.07
MSL1YIR009W ACL4Q03771 387 aa2.13□□□□□ -2.07
MSL1YIR009W TAP42Q04372 366 aa2.13□□□□□ -2.07
MSL1YIR009W COS7Q07788 383 aa2.13□□□□□ -2.07
MSL1YIR009W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
MSL1YIR009W AEP3Q12089 606 aa2.13□□□□□ -2.07
MSL1YIR009W DNF2Q12675 1612 aa2.13□□□□□ -2.07
MSL1YIR009W PDR15Q04182 1529 aaKnown RBP2.12□□□□□ -2.07
MSL1YIR009W MES1P00958 751 aaKnown RBP2.12□□□□□ -2.07
MSL1YIR009W PEP4P07267 405 aaKnown RBP2.12□□□□□ -2.07
MSL1YIR009W RPL1AP0CX43 217 aaKnown RBP2.12□□□□□ -2.07
MSL1YIR009W RPL1BP0CX44 217 aaKnown RBP2.12□□□□□ -2.07
MSL1YIR009W GLK1P17709 500 aaKnown RBP2.12□□□□□ -2.07
MSL1YIR009W CLN1P20437 546 aa2.12□□□□□ -2.07
MSL1YIR009W PHO84P25297 587 aaKnown RBP2.12□□□□□ -2.07
MSL1YIR009W RPS2P25443 254 aaKnown RBP2.12□□□□□ -2.07
MSL1YIR009W POT1P27796 417 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
MSL1YIR009W BEM1P29366 551 aa2.12□□□□□ -2.07
MSL1YIR009W SNC1P31109 117 aa2.12□□□□□ -2.07
MSL1YIR009W NDC1P32500 655 aa2.12□□□□□ -2.07
MSL1YIR009W NIP100P33420 868 aa2.12□□□□□ -2.07
MSL1YIR009W LTV1P34078 463 aa2.12□□□□□ -2.07
MSL1YIR009W YKL023WP36103 277 aaKnown RBP2.12□□□□□ -2.07
MSL1YIR009W BNA4P38169 460 aa2.12□□□□□ -2.07
MSL1YIR009W PFF1P38244 976 aa2.12□□□□□ -2.07
MSL1YIR009W SIF2P38262 535 aa2.12□□□□□ -2.07
MSL1YIR009W VHC1P38329 1120 aa2.12□□□□□ -2.07
MSL1YIR009W ALK1P43633 760 aaKnown RBP2.12□□□□□ -2.07
MSL1YIR009W RPS0BP46654 252 aaKnown RBP2.12□□□□□ -2.07
MSL1YIR009W FYV8P46949 817 aaKnown RBP2.12□□□□□ -2.07
MSL1YIR009W YGL242CP53066 181 aa2.12□□□□□ -2.07
MSL1YIR009W RMD9P53140 646 aaKnown RBP2.12□□□□□ -2.07
MSL1YIR009W SAM50P53969 484 aa2.12□□□□□ -2.07
MSL1YIR009W PPM1Q04081 328 aa2.12□□□□□ -2.07
MSL1YIR009W YMR087WQ04299 284 aa2.12□□□□□ -2.07
MSL1YIR009W DCS1Q06151 350 aa2.12□□□□□ -2.07
MSL1YIR009W PML1Q07930 204 aaPredicted RBP2.12□□□□□ -2.07
MSL1YIR009W THI20Q08224 551 aa2.12□□□□□ -2.07
MSL1YIR009W BSC6Q08280 497 aa2.12□□□□□ -2.07
MSL1YIR009W VAM3Q12241 283 aa2.12□□□□□ -2.07
MSL1YIR009W YDR061WQ12298 539 aa2.12□□□□□ -2.07
MSL1YIR009W RPL6BP05739 176 aaKnown RBP2.11□□□□□ -2.07
MSL1YIR009W RAD52P06778 471 aaKnown RBP2.11□□□□□ -2.07
MSL1YIR009W MTF1P14908 341 aaKnown RBP2.11□□□□□ -2.07
MSL1YIR009W DAL5P15365 543 aa2.11□□□□□ -2.07
MSL1YIR009W ATP10P18496 279 aa2.11□□□□□ -2.07
MSL1YIR009W PRP2P20095 876 aaPredicted RBP2.11□□□□□ -2.07
MSL1YIR009W SPC110P32380 944 aa2.11□□□□□ -2.07
MSL1YIR009W RIM1P32445 135 aaKnown RBP2.11□□□□□ -2.07
MSL1YIR009W HIR2P32480 875 aa2.11□□□□□ -2.07
MSL1YIR009W SIP2P34164 415 aaKnown RBP2.11□□□□□ -2.07
MSL1YIR009W ECM15P35195 104 aa2.11□□□□□ -2.07
MSL1YIR009W DAD2P36162 133 aa2.11□□□□□ -2.07
MSL1YIR009W ADH5P38113 351 aaKnown RBP2.11□□□□□ -2.07
MSL1YIR009W TCM62P38228 572 aaKnown RBP2.11□□□□□ -2.07
MSL1YIR009W YSW1P38280 609 aa2.11□□□□□ -2.07
MSL1YIR009W MEP1P40260 492 aa2.11□□□□□ -2.07
MSL1YIR009W EPL1P43572 832 aa2.11□□□□□ -2.07
MSL1YIR009W HEF3P53978 1044 aaKnown RBP2.11□□□□□ -2.07
MSL1YIR009W RPL6AQ02326 176 aaKnown RBP2.11□□□□□ -2.07
MSL1YIR009W ADA2Q02336 434 aa2.11□□□□□ -2.07
MSL1YIR009W YPL014WQ02606 381 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 92.4 ms