RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W HFA1P32874 2273 aa4.86□□□□□ -1.63
MSH1YHR120W RAP1P11938 827 aa4.86□□□□□ -1.63
MSH1YHR120W TOP3P13099 656 aa4.86□□□□□ -1.63
MSH1YHR120W RPB4P20433 221 aaPredicted RBP4.86□□□□□ -1.63
MSH1YHR120W CCA1P21269 546 aa4.86□□□□□ -1.63
MSH1YHR120W PDR3P33200 976 aa4.86□□□□□ -1.63
MSH1YHR120W PEX6P33760 1030 aa4.86□□□□□ -1.63
MSH1YHR120W ASK1P35734 292 aa4.86□□□□□ -1.63
MSH1YHR120W CAF4P36130 643 aa4.86□□□□□ -1.63
MSH1YHR120W YPK3P38070 525 aa4.86□□□□□ -1.63
MSH1YHR120W YBR138CP38277 524 aa4.86□□□□□ -1.63
MSH1YHR120W YHR218WP38899 603 aa4.86□□□□□ -1.63
MSH1YHR120W PLB1P39105 664 aa4.86□□□□□ -1.63
MSH1YHR120W YER158CP40095 573 aa4.86□□□□□ -1.63
MSH1YHR120W MSS2P40990 351 aa4.86□□□□□ -1.63
MSH1YHR120W YGR015CP53208 328 aa4.86□□□□□ -1.63
MSH1YHR120W SWP1Q02795 286 aa4.86□□□□□ -1.63
MSH1YHR120W NHP10Q03435 203 aa4.86□□□□□ -1.63
MSH1YHR120W GAL83Q04739 417 aa4.86□□□□□ -1.63
MSH1YHR120W YDR056CQ12025 205 aa4.86□□□□□ -1.63
MSH1YHR120W MCD1Q12158 566 aa4.86□□□□□ -1.63
MSH1YHR120W TPK3P05986 398 aa4.86□□□□□ -1.63
MSH1YHR120W STE4P18851 423 aa4.86□□□□□ -1.63
MSH1YHR120W BUB2P26448 306 aaPredicted RBP4.86□□□□□ -1.63
MSH1YHR120W YKL100CP34248 587 aa4.86□□□□□ -1.63
MSH1YHR120W TPO5P36029 618 aa4.86□□□□□ -1.63
MSH1YHR120W EMC3P36039 253 aa4.86□□□□□ -1.63
MSH1YHR120W GIC1P38785 314 aa4.86□□□□□ -1.63
MSH1YHR120W THO1P40040 218 aaKnown RBP4.86□□□□□ -1.63
MSH1YHR120W YJL055WP47044 245 aa4.86□□□□□ -1.63
MSH1YHR120W RTS3P53289 263 aa4.86□□□□□ -1.63
MSH1YHR120W BCH1Q05029 724 aa4.86□□□□□ -1.63
MSH1YHR120W LOT6Q07923 191 aa4.86□□□□□ -1.63
MSH1YHR120W ULA1Q12059 462 aa4.86□□□□□ -1.63
MSH1YHR120W YOL159C-AQ3E769 90 aa4.86□□□□□ -1.63
MSH1YHR120W HEM2P05373 342 aa4.85□□□□□ -1.63
MSH1YHR120W RPS4AP0CX35 261 aaKnown RBP4.85□□□□□ -1.63
MSH1YHR120W RPS4BP0CX36 261 aaKnown RBP4.85□□□□□ -1.63
MSH1YHR120W FUR1P18562 216 aaKnown RBP4.85□□□□□ -1.63
MSH1YHR120W MEI5P32489 222 aa4.85□□□□□ -1.63
MSH1YHR120W ATO2P32907 282 aa4.85□□□□□ -1.63
MSH1YHR120W YBL029WP38201 376 aa4.85□□□□□ -1.63
MSH1YHR120W TDP1P38319 544 aa4.85□□□□□ -1.63
MSH1YHR120W DHH1P39517 506 aaKnown RBP4.85□□□□□ -1.63
MSH1YHR120W AVT6P40074 448 aa4.85□□□□□ -1.63
MSH1YHR120W PRM2P40534 656 aa4.85□□□□□ -1.63
MSH1YHR120W YGL176CP46945 554 aa4.85□□□□□ -1.63
MSH1YHR120W YJR149WP47177 404 aa4.85□□□□□ -1.63
MSH1YHR120W ORM1P53224 222 aa4.85□□□□□ -1.63
MSH1YHR120W IBD2P53892 351 aa4.85□□□□□ -1.63
MSH1YHR120W NDL1Q06568 189 aa4.85□□□□□ -1.63
MSH1YHR120W BSC6Q08280 497 aa4.85□□□□□ -1.63
MSH1YHR120W REP1P03871 373 aa4.85□□□□□ -1.63
MSH1YHR120W RIP1P08067 215 aa4.85□□□□□ -1.63
MSH1YHR120W RSR1P13856 272 aa4.85□□□□□ -1.63
MSH1YHR120W CTR86P25355 563 aa4.85□□□□□ -1.63
MSH1YHR120W RPS1AP33442 255 aaKnown RBP4.85□□□□□ -1.63
MSH1YHR120W SKT5P34226 696 aa4.85□□□□□ -1.63
MSH1YHR120W FMP46P36141 133 aaKnown RBP4.85□□□□□ -1.63
MSH1YHR120W INM1P38710 295 aa4.85□□□□□ -1.63
MSH1YHR120W FAD1P38913 306 aa4.85□□□□□ -1.63
MSH1YHR120W YJR154WP47181 346 aa4.85□□□□□ -1.63
MSH1YHR120W YMR034CQ05131 434 aaPredicted RBP4.85□□□□□ -1.63
MSH1YHR120W ENT2Q05785 613 aa4.85□□□□□ -1.63
MSH1YHR120W DIC1Q06143 298 aa4.85□□□□□ -1.63
MSH1YHR120W DIN7Q12086 430 aa4.85□□□□□ -1.63
MSH1YHR120W YLR111WQ12528 110 aa4.85□□□□□ -1.63
MSH1YHR120W MED11Q99278 115 aa4.85□□□□□ -1.63
MSH1YHR120W IRA1P18963 3092 aa4.84□□□□□ -1.63
MSH1YHR120W CMK2P22517 447 aa4.84□□□□□ -1.63
MSH1YHR120W RPN2P32565 945 aaKnown RBP4.84□□□□□ -1.63
MSH1YHR120W STE14P32584 239 aa4.84□□□□□ -1.63
MSH1YHR120W PEP12P32854 288 aa4.84□□□□□ -1.63
MSH1YHR120W MET18P40469 1032 aa4.84□□□□□ -1.63
MSH1YHR120W YJL049WP47048 450 aa4.84□□□□□ -1.63
MSH1YHR120W ERG26P53199 349 aaKnown RBP4.84□□□□□ -1.63
MSH1YHR120W YGR053CP53234 283 aa4.84□□□□□ -1.63
MSH1YHR120W SHY1P53266 389 aa4.84□□□□□ -1.63
MSH1YHR120W UGO1Q03327 502 aa4.84□□□□□ -1.63
MSH1YHR120W RRP17Q04031 235 aaPredicted RBP4.84□□□□□ -1.63
MSH1YHR120W GPB1Q08886 897 aa4.84□□□□□ -1.63
MSH1YHR120W RSA1Q08932 381 aa4.84□□□□□ -1.63
MSH1YHR120W ATG29Q12092 213 aa4.84□□□□□ -1.63
MSH1YHR120W TRP3P00937 484 aa4.84□□□□□ -1.63
MSH1YHR120W STE3P06783 470 aa4.84□□□□□ -1.63
MSH1YHR120W PTP1P25044 335 aa4.84□□□□□ -1.63
MSH1YHR120W HOG1P32485 435 aa4.84□□□□□ -1.63
MSH1YHR120W NGG1P32494 702 aa4.84□□□□□ -1.63
MSH1YHR120W SFC1P33303 322 aa4.84□□□□□ -1.63
MSH1YHR120W SDH3P33421 198 aa4.84□□□□□ -1.63
MSH1YHR120W RSP5P39940 809 aaKnown RBP4.84□□□□□ -1.63
MSH1YHR120W KRE29P40026 464 aa4.84□□□□□ -1.63
MSH1YHR120W EMP65P40085 556 aa4.84□□□□□ -1.63
MSH1YHR120W YRB1P41920 201 aaKnown RBP4.84□□□□□ -1.63
MSH1YHR120W ELP2P42935 788 aa4.84□□□□□ -1.63
MSH1YHR120W ALK1P43633 760 aaKnown RBP4.84□□□□□ -1.63
MSH1YHR120W YJR030CP47101 745 aa4.84□□□□□ -1.63
MSH1YHR120W RIM21P48565 533 aa4.84□□□□□ -1.63
MSH1YHR120W MDM34P53083 459 aa4.84□□□□□ -1.63
MSH1YHR120W YNR068CP53754 272 aa4.84□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms