RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W PSR1Q07800 427 aa5.37□□□□□ -1.55
VMA16YHR026W LDB18Q07887 179 aa5.37□□□□□ -1.55
VMA16YHR026W DIA2Q08496 732 aaPredicted RBP5.37□□□□□ -1.55
VMA16YHR026W MCH5Q08777 521 aa5.37□□□□□ -1.55
VMA16YHR026W VPS68Q12016 184 aa5.37□□□□□ -1.55
VMA16YHR026W CHS5Q12114 671 aaKnown RBP5.37□□□□□ -1.55
VMA16YHR026W OCA6Q12454 224 aa5.37□□□□□ -1.55
VMA16YHR026W YOR338WQ99326 363 aa5.37□□□□□ -1.55
VMA16YHR026W COX5AP00424 153 aa5.36□□□□□ -1.55
VMA16YHR026W SCH9P11792 824 aaKnown RBP5.36□□□□□ -1.55
VMA16YHR026W GLN4P13188 809 aaKnown RBP5.36□□□□□ -1.55
VMA16YHR026W TRX2P22803 104 aaKnown RBP5.36□□□□□ -1.55
VMA16YHR026W SED4P25365 1065 aa5.36□□□□□ -1.55
VMA16YHR026W TFC1P32367 649 aa5.36□□□□□ -1.55
VMA16YHR026W TOM20P35180 183 aa5.36□□□□□ -1.55
VMA16YHR026W DSS1P39112 969 aa5.36□□□□□ -1.55
VMA16YHR026W SEO1P39709 593 aa5.36□□□□□ -1.55
VMA16YHR026W HAT2P39984 401 aa5.36□□□□□ -1.55
VMA16YHR026W MGS1P40151 587 aa5.36□□□□□ -1.55
VMA16YHR026W SIP4P46954 829 aa5.36□□□□□ -1.55
VMA16YHR026W GCD14P46959 383 aaPredicted RBP5.36□□□□□ -1.55
VMA16YHR026W SWC4P53201 476 aa5.36□□□□□ -1.55
VMA16YHR026W DAM1P53267 343 aa5.36□□□□□ -1.55
VMA16YHR026W GND2P53319 492 aa5.36□□□□□ -1.55
VMA16YHR026W ALG12P53730 551 aa5.36□□□□□ -1.55
VMA16YHR026W YNL143CP53908 130 aa5.36□□□□□ -1.55
VMA16YHR026W PET117Q02771 107 aa5.36□□□□□ -1.55
VMA16YHR026W YDR476CQ03362 224 aa5.36□□□□□ -1.55
VMA16YHR026W NHP10Q03435 203 aa5.36□□□□□ -1.55
VMA16YHR026W YMR155WQ03795 547 aa5.36□□□□□ -1.55
VMA16YHR026W YDR514CQ04408 483 aa5.36□□□□□ -1.55
VMA16YHR026W ENT4Q07872 247 aa5.36□□□□□ -1.55
VMA16YHR026W PLB3Q08108 686 aa5.36□□□□□ -1.55
VMA16YHR026W TRM8Q12009 286 aa5.36□□□□□ -1.55
VMA16YHR026W APC9Q12107 265 aa5.36□□□□□ -1.55
VMA16YHR026W TMS1Q12116 473 aa5.36□□□□□ -1.55
VMA16YHR026W UPC2Q12151 913 aa5.36□□□□□ -1.55
VMA16YHR026W YDR262WQ12331 272 aa5.36□□□□□ -1.55
VMA16YHR026W NPC2Q12408 173 aa5.36□□□□□ -1.55
VMA16YHR026W HSH49Q99181 213 aaPredicted RBP5.36□□□□□ -1.55
VMA16YHR026W HEM2P05373 342 aa5.35□□□□□ -1.55
VMA16YHR026W ERG20P08524 352 aaKnown RBP5.35□□□□□ -1.55
VMA16YHR026W ACO1P19414 778 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
VMA16YHR026W URA4P20051 364 aa5.35□□□□□ -1.55
VMA16YHR026W RPB4P20433 221 aaPredicted RBP5.35□□□□□ -1.55
VMA16YHR026W YCR090CP25654 182 aaKnown RBP5.35□□□□□ -1.55
VMA16YHR026W AEP1P32493 518 aa5.35□□□□□ -1.55
VMA16YHR026W ASK1P35734 292 aa5.35□□□□□ -1.55
VMA16YHR026W ARA1P38115 344 aa5.35□□□□□ -1.55
VMA16YHR026W BEM4P39011 633 aa5.35□□□□□ -1.55
VMA16YHR026W MAM33P40513 266 aa5.35□□□□□ -1.55
VMA16YHR026W BUD13P46947 266 aaPredicted RBP5.35□□□□□ -1.55
VMA16YHR026W TY4A-JP47023 414 aa5.35□□□□□ -1.55
VMA16YHR026W STR3P53101 465 aaKnown RBP5.35□□□□□ -1.55
VMA16YHR026W NOP19P53317 196 aaPredicted RBP5.35□□□□□ -1.55
VMA16YHR026W PRO2P54885 456 aaKnown RBP5.35□□□□□ -1.55
VMA16YHR026W LSM3P57743 89 aaKnown RBP5.35□□□□□ -1.55
VMA16YHR026W SPP2Q02521 185 aa5.35□□□□□ -1.55
VMA16YHR026W RNY1Q02933 434 aaKnown RBP5.35□□□□□ -1.55
VMA16YHR026W CSN9Q03981 162 aa5.35□□□□□ -1.55
VMA16YHR026W GGA1Q06336 557 aa5.35□□□□□ -1.55
VMA16YHR026W MEU1Q07938 337 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
VMA16YHR026W HAL9Q12180 1030 aa5.35□□□□□ -1.55
VMA16YHR026W MDY2Q12285 212 aa5.35□□□□□ -1.55
VMA16YHR026W ATP2P00830 511 aaKnown RBP5.34□□□□□ -1.55
VMA16YHR026W AAT2P23542 418 aaKnown RBP5.34□□□□□ -1.55
VMA16YHR026W MEF1P25039 761 aa5.34□□□□□ -1.55
VMA16YHR026W GFD2P25370 566 aaKnown RBP5.34□□□□□ -1.55
VMA16YHR026W CSM1P25651 190 aa5.34□□□□□ -1.55
VMA16YHR026W ATP7P30902 174 aa5.34□□□□□ -1.55
VMA16YHR026W SEF1P34228 1148 aa5.34□□□□□ -1.55
VMA16YHR026W AST1P35183 429 aa5.34□□□□□ -1.55
VMA16YHR026W CTF13P35203 478 aa5.34□□□□□ -1.55
VMA16YHR026W MPT5P39016 859 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
VMA16YHR026W TIM17P39515 158 aa5.34□□□□□ -1.55
VMA16YHR026W URM1P40554 99 aaPredicted RBP5.34□□□□□ -1.55
VMA16YHR026W SEC27P41811 889 aaKnown RBP5.34□□□□□ -1.55
VMA16YHR026W IKS1P47042 667 aa5.34□□□□□ -1.55
VMA16YHR026W VMA10P48836 114 aaKnown RBP5.34□□□□□ -1.55
VMA16YHR026W YGL108CP53139 140 aa5.34□□□□□ -1.55
VMA16YHR026W YNL010WP53981 241 aaKnown RBP5.34□□□□□ -1.55
VMA16YHR026W NUP100Q02629 959 aa5.34□□□□□ -1.55
VMA16YHR026W SPO19Q03029 223 aa5.34□□□□□ -1.55
VMA16YHR026W ATG26Q06321 1198 aa5.34□□□□□ -1.55
VMA16YHR026W NSL1Q12143 216 aa5.34□□□□□ -1.55
VMA16YHR026W ADF1Q2V2Q1 113 aa5.34□□□□□ -1.55
VMA16YHR026W YAK1P14680 807 aa5.33□□□□□ -1.56
VMA16YHR026W CLN1P20437 546 aa5.33□□□□□ -1.56
VMA16YHR026W UBA1P22515 1024 aaKnown RBP5.33□□□□□ -1.56
VMA16YHR026W VPS34P22543 875 aa5.33□□□□□ -1.56
VMA16YHR026W YSP3P25036 478 aa5.33□□□□□ -1.56
VMA16YHR026W YCR006CP25350 157 aa5.33□□□□□ -1.56
VMA16YHR026W RPL5P26321 297 aaKnown RBP5.33□□□□□ -1.56
VMA16YHR026W PHO91P27514 894 aa5.33□□□□□ -1.56
VMA16YHR026W ZIP1P31111 875 aa5.33□□□□□ -1.56
VMA16YHR026W NTH1P32356 751 aa5.33□□□□□ -1.56
VMA16YHR026W MF(ALPHA)2P32435 120 aa5.33□□□□□ -1.56
VMA16YHR026W CDC13P32797 924 aaKnown RBP5.33□□□□□ -1.56
VMA16YHR026W YME2P32843 850 aa5.33□□□□□ -1.56
VMA16YHR026W MUP3P38734 546 aa5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms