RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W DUG2P38149 878 aa3.46□□□□□ -1.85
CAF130YGR134W FMO1P38866 432 aa3.46□□□□□ -1.85
CAF130YGR134W UIP3P39547 235 aa3.46□□□□□ -1.85
CAF130YGR134W YDL186WP48568 277 aa3.46□□□□□ -1.85
CAF130YGR134W FUS2Q05670 677 aa3.46□□□□□ -1.85
CAF130YGR134W ARG4P04076 463 aaPredicted RBP3.46□□□□□ -1.86
CAF130YGR134W KIN82P25341 720 aa3.46□□□□□ -1.86
CAF130YGR134W NTH1P32356 751 aa3.46□□□□□ -1.86
CAF130YGR134W PTR2P32901 601 aa3.46□□□□□ -1.86
CAF130YGR134W RPC34P32910 317 aa3.46□□□□□ -1.86
CAF130YGR134W GDT1P38301 280 aaPredicted RBP3.46□□□□□ -1.86
CAF130YGR134W ERG7P38604 731 aa3.46□□□□□ -1.86
CAF130YGR134W YHL012WP38709 493 aa3.46□□□□□ -1.86
CAF130YGR134W TAF6P53040 516 aa3.46□□□□□ -1.86
CAF130YGR134W MPP6P53725 186 aaPredicted RBP3.46□□□□□ -1.86
CAF130YGR134W OCA2P53949 197 aa3.46□□□□□ -1.86
CAF130YGR134W ADE12P80210 433 aaKnown RBP3.46□□□□□ -1.86
CAF130YGR134W CAB5Q03941 241 aa3.46□□□□□ -1.86
CAF130YGR134W AIM33Q04516 312 aa3.46□□□□□ -1.86
CAF130YGR134W FMP16Q12497 93 aa3.46□□□□□ -1.86
CAF130YGR134W TCP1P12612 559 aaKnown RBP3.46□□□□□ -1.86
CAF130YGR134W FUS3P16892 353 aaKnown RBP3.46□□□□□ -1.86
CAF130YGR134W CDC42P19073 191 aa3.46□□□□□ -1.86
CAF130YGR134W SUA5P32579 426 aa3.46□□□□□ -1.86
CAF130YGR134W RFC5P38251 354 aa3.46□□□□□ -1.86
CAF130YGR134W SWC5P38326 303 aa3.46□□□□□ -1.86
CAF130YGR134W TIF5P38431 405 aaKnown RBP3.46□□□□□ -1.86
CAF130YGR134W MTW1P39731 289 aa3.46□□□□□ -1.86
CAF130YGR134W SLM1P40485 686 aa3.46□□□□□ -1.86
CAF130YGR134W TAX4P47030 604 aa3.46□□□□□ -1.86
CAF130YGR134W TOS2P50078 622 aa3.46□□□□□ -1.86
CAF130YGR134W YGR079WP53249 370 aa3.46□□□□□ -1.86
CAF130YGR134W CAF130P53280 1122 aaPredicted RBP3.46□□□□□ -1.86
CAF130YGR134W RSM28Q03430 361 aa3.46□□□□□ -1.86
CAF130YGR134W CRN1Q06440 651 aa3.46□□□□□ -1.86
CAF130YGR134W SIL1Q08199 421 aa3.46□□□□□ -1.86
CAF130YGR134W NOP12Q08208 459 aaKnown RBP3.46□□□□□ -1.86
CAF130YGR134W AEP3Q12089 606 aa3.46□□□□□ -1.86
CAF130YGR134W BAG7Q12128 409 aa3.46□□□□□ -1.86
CAF130YGR134W VAM3Q12241 283 aa3.46□□□□□ -1.86
CAF130YGR134W PRP2P20095 876 aaPredicted RBP3.45□□□□□ -1.86
CAF130YGR134W SPE2P21182 396 aa3.45□□□□□ -1.86
CAF130YGR134W MVD1P32377 396 aaKnown RBP3.45□□□□□ -1.86
CAF130YGR134W OCT1P35999 772 aa3.45□□□□□ -1.86
CAF130YGR134W MRPL10P36520 322 aa3.45□□□□□ -1.86
CAF130YGR134W ATG14P38270 344 aa3.45□□□□□ -1.86
CAF130YGR134W SMF2P38778 549 aa3.45□□□□□ -1.86
CAF130YGR134W LIA1P47120 325 aaKnown RBP3.45□□□□□ -1.86
CAF130YGR134W YGR126WP53274 230 aa3.45□□□□□ -1.86
CAF130YGR134W WAR1Q03631 944 aa3.45□□□□□ -1.86
CAF130YGR134W APC4Q04601 652 aa3.45□□□□□ -1.86
CAF130YGR134W COQ4O13525 335 aa3.45□□□□□ -1.86
CAF130YGR134W YPR089WO13585 888 aa3.45□□□□□ -1.86
CAF130YGR134W TDH2P00358 332 aaKnown RBP3.45□□□□□ -1.86
CAF130YGR134W TDH3P00359 332 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
CAF130YGR134W CHO1P08456 276 aa3.45□□□□□ -1.86
CAF130YGR134W YCP4P25349 247 aaKnown RBP3.45□□□□□ -1.86
CAF130YGR134W CBF5P33322 483 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
CAF130YGR134W GLY1P37303 387 aaKnown RBP3.45□□□□□ -1.86
CAF130YGR134W KAP104P38217 918 aaKnown RBP3.45□□□□□ -1.86
CAF130YGR134W LCP5P40079 357 aaPredicted RBP3.45□□□□□ -1.86
CAF130YGR134W YIR016WP40572 265 aa3.45□□□□□ -1.86
CAF130YGR134W ATG27P46989 271 aa3.45□□□□□ -1.86
CAF130YGR134W MSE1P48525 536 aa3.45□□□□□ -1.86
CAF130YGR134W KAP114P53067 1004 aa3.45□□□□□ -1.86
CAF130YGR134W YGL108CP53139 140 aa3.45□□□□□ -1.86
CAF130YGR134W NUP116Q02630 1113 aa3.45□□□□□ -1.86
CAF130YGR134W MMT1Q03218 510 aa3.45□□□□□ -1.86
CAF130YGR134W ERG27Q12452 347 aaKnown RBP3.45□□□□□ -1.86
CAF130YGR134W RMD5Q12508 421 aa3.45□□□□□ -1.86
CAF130YGR134W MTR10Q99189 972 aa3.45□□□□□ -1.86
CAF130YGR134W TY1B-NL2Q99337 1749 aaKnown RBP3.45□□□□□ -1.86
CAF130YGR134W SIR3P06701 978 aa3.45□□□□□ -1.86
CAF130YGR134W PEP4P07267 405 aaKnown RBP3.45□□□□□ -1.86
CAF130YGR134W ART10P18634 518 aaKnown RBP3.45□□□□□ -1.86
CAF130YGR134W URA4P20051 364 aa3.45□□□□□ -1.86
CAF130YGR134W KRE2P27809 442 aa3.45□□□□□ -1.86
CAF130YGR134W CUE2P36075 443 aaKnown RBP3.45□□□□□ -1.86
CAF130YGR134W AIM29P36154 155 aa3.45□□□□□ -1.86
CAF130YGR134W YBR053CP38235 358 aa3.45□□□□□ -1.86
CAF130YGR134W SKN7P38889 622 aa3.45□□□□□ -1.86
CAF130YGR134W CCT4P39078 528 aaKnown RBP3.45□□□□□ -1.86
CAF130YGR134W ASG1P40467 964 aa3.45□□□□□ -1.86
CAF130YGR134W YRB2P40517 327 aa3.45□□□□□ -1.86
CAF130YGR134W LYS20P48570 428 aaKnown RBP3.45□□□□□ -1.86
CAF130YGR134W YGR067CP53243 804 aa3.45□□□□□ -1.86
CAF130YGR134W ORC3P54790 616 aa3.45□□□□□ -1.86
CAF130YGR134W RTN1Q04947 295 aaKnown RBP3.45□□□□□ -1.86
CAF130YGR134W RTT103Q05543 409 aa3.45□□□□□ -1.86
CAF130YGR134W CDC123Q05791 360 aa3.45□□□□□ -1.86
CAF130YGR134W CTS2Q06350 511 aa3.45□□□□□ -1.86
CAF130YGR134W LYS21Q12122 440 aaKnown RBP3.45□□□□□ -1.86
CAF130YGR134W RNH203Q12338 110 aa3.45□□□□□ -1.86
CAF130YGR134W LPX1Q12405 387 aaKnown RBP3.45□□□□□ -1.86
CAF130YGR134W DCP1Q12517 231 aaPredicted RBP3.45□□□□□ -1.86
CAF130YGR134W SCEIP03882 235 aa3.44□□□□□ -1.86
CAF130YGR134W PUT2P07275 575 aa3.44□□□□□ -1.86
CAF130YGR134W RPL31BP0C2H9 113 aaKnown RBP3.44□□□□□ -1.86
CAF130YGR134W PRP16P15938 1071 aaPredicted RBP3.44□□□□□ -1.86
CAF130YGR134W PRE8P23639 250 aa3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms