RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C ICL2Q12031 575 aa3.16□□□□□ -1.9
XRN1YGL173C GSC2P40989 1895 aa3.16□□□□□ -1.9
XRN1YGL173C PUT4P15380 627 aa3.16□□□□□ -1.9
XRN1YGL173C UGA1P17649 471 aa3.16□□□□□ -1.9
XRN1YGL173C KIN3P22209 435 aa3.16□□□□□ -1.9
XRN1YGL173C CDC20P26309 610 aa3.16□□□□□ -1.9
XRN1YGL173C ERG9P29704 444 aa3.16□□□□□ -1.9
XRN1YGL173C SAC1P32368 623 aaKnown RBP3.16□□□□□ -1.9
XRN1YGL173C ASF2P32448 525 aaPredicted RBP3.16□□□□□ -1.9
XRN1YGL173C HIR2P32480 875 aa3.16□□□□□ -1.9
XRN1YGL173C YUH1P35127 236 aa3.16□□□□□ -1.9
XRN1YGL173C DIA3P52290 468 aa3.16□□□□□ -1.9
XRN1YGL173C YMR102CQ03177 834 aa3.16□□□□□ -1.9
XRN1YGL173C GCN5Q03330 439 aa3.16□□□□□ -1.9
XRN1YGL173C PDS5Q04264 1277 aa3.16□□□□□ -1.9
XRN1YGL173C BNA5Q05979 453 aa3.16□□□□□ -1.9
XRN1YGL173C YLR413WQ06689 675 aa3.16□□□□□ -1.9
XRN1YGL173C RXT3Q07458 294 aa3.16□□□□□ -1.9
XRN1YGL173C YOL075CQ08234 1294 aa3.16□□□□□ -1.9
XRN1YGL173C PUS9Q12069 462 aa3.16□□□□□ -1.9
XRN1YGL173C APL1P27351 700 aa3.16□□□□□ -1.9
XRN1YGL173C PRE2P30656 287 aaKnown RBP3.16□□□□□ -1.9
XRN1YGL173C VPS51P36116 164 aa3.16□□□□□ -1.9
XRN1YGL173C FES1P38260 290 aa3.16□□□□□ -1.9
XRN1YGL173C SIP3P38717 1229 aa3.16□□□□□ -1.9
XRN1YGL173C VOA1P53262 265 aa3.16□□□□□ -1.9
XRN1YGL173C YNL260CP53846 198 aa3.16□□□□□ -1.9
XRN1YGL173C WAR1Q03631 944 aa3.16□□□□□ -1.9
XRN1YGL173C PLB2Q03674 706 aa3.16□□□□□ -1.9
XRN1YGL173C URC2Q04411 772 aa3.16□□□□□ -1.9
XRN1YGL173C SKI7Q08491 747 aaPredicted RBP3.16□□□□□ -1.9
XRN1YGL173C LYS21Q12122 440 aaKnown RBP3.16□□□□□ -1.9
XRN1YGL173C RLM1Q12224 676 aa3.16□□□□□ -1.9
XRN1YGL173C NPC2Q12408 173 aa3.16□□□□□ -1.9
XRN1YGL173C YBL111CQ3E7Y5 667 aa3.16□□□□□ -1.9
XRN1YGL173C YER175W-AQ8TGU4 54 aa3.16□□□□□ -1.9
XRN1YGL173C YPR089WO13585 888 aa3.15□□□□□ -1.9
XRN1YGL173C PEP4P07267 405 aaKnown RBP3.15□□□□□ -1.9
XRN1YGL173C PMA2P19657 947 aa3.15□□□□□ -1.9
XRN1YGL173C SEC15P22224 910 aa3.15□□□□□ -1.9
XRN1YGL173C MEK1P24719 497 aaPredicted RBP3.15□□□□□ -1.9
XRN1YGL173C REC114P32841 428 aa3.15□□□□□ -1.9
XRN1YGL173C UGP1P32861 499 aaKnown RBP3.15□□□□□ -1.9
XRN1YGL173C THI2P38141 450 aa3.15□□□□□ -1.9
XRN1YGL173C SRO77P38163 1010 aa3.15□□□□□ -1.9
XRN1YGL173C YRB2P40517 327 aa3.15□□□□□ -1.9
XRN1YGL173C CDC1P40986 491 aa3.15□□□□□ -1.9
XRN1YGL173C RPC17P47076 161 aa3.15□□□□□ -1.9
XRN1YGL173C MRK1P50873 501 aa3.15□□□□□ -1.9
XRN1YGL173C CAC2Q04199 468 aa3.15□□□□□ -1.9
XRN1YGL173C RRD2Q12461 358 aa3.15□□□□□ -1.9
XRN1YGL173C CSR2Q12734 1121 aa3.15□□□□□ -1.9
XRN1YGL173C RSR1P13856 272 aa3.15□□□□□ -1.9
XRN1YGL173C RPL5P26321 297 aaKnown RBP3.15□□□□□ -1.9
XRN1YGL173C CIN8P27895 1000 aa3.15□□□□□ -1.9
XRN1YGL173C LAC1P28496 418 aa3.15□□□□□ -1.9
XRN1YGL173C RPD3P32561 433 aa3.15□□□□□ -1.9
XRN1YGL173C PIH1P38768 344 aa3.15□□□□□ -1.9
XRN1YGL173C ICP55P40051 511 aa3.15□□□□□ -1.9
XRN1YGL173C ECL1P48235 211 aa3.15□□□□□ -1.9
XRN1YGL173C TAM41P53230 385 aa3.15□□□□□ -1.9
XRN1YGL173C CRN1Q06440 651 aa3.15□□□□□ -1.9
XRN1YGL173C ACK1Q07622 623 aaPredicted RBP3.15□□□□□ -1.9
XRN1YGL173C SNF8Q12483 233 aa3.15□□□□□ -1.9
XRN1YGL173C RPL12AP0CX53 165 aaKnown RBP3.15□□□□□ -1.91
XRN1YGL173C RPL12BP0CX54 165 aa3.15□□□□□ -1.91
XRN1YGL173C TUP1P16649 713 aa3.15□□□□□ -1.91
XRN1YGL173C GSY2P27472 705 aa3.15□□□□□ -1.91
XRN1YGL173C TUL1P36096 758 aa3.15□□□□□ -1.91
XRN1YGL173C MSG5P38590 489 aa3.15□□□□□ -1.91
XRN1YGL173C RCY1P39531 840 aa3.15□□□□□ -1.91
XRN1YGL173C PAN2P53010 1115 aaPredicted RBP3.15□□□□□ -1.91
XRN1YGL173C ZPR1P53303 486 aaKnown RBP3.15□□□□□ -1.91
XRN1YGL173C MED7Q08278 222 aa3.15□□□□□ -1.91
XRN1YGL173C ATG31Q12421 196 aa3.15□□□□□ -1.91
XRN1YGL173C GSH1P32477 678 aa3.15□□□□□ -1.91
XRN1YGL173C SOF1P33750 489 aaKnown RBP3.15□□□□□ -1.91
XRN1YGL173C SER3P40054 469 aa3.15□□□□□ -1.91
XRN1YGL173C COX16P47081 118 aa3.15□□□□□ -1.91
XRN1YGL173C SMX3P54999 86 aaPredicted RBP3.15□□□□□ -1.91
XRN1YGL173C ABP140Q08641 628 aaKnown RBP3.15□□□□□ -1.91
XRN1YGL173C ATP6P00854 259 aa3.14□□□□□ -1.91
XRN1YGL173C HOM2P13663 365 aaKnown RBP3.14□□□□□ -1.91
XRN1YGL173C SLY1P22213 666 aa3.14□□□□□ -1.91
XRN1YGL173C MRPL8P22353 238 aa3.14□□□□□ -1.91
XRN1YGL173C ACH1P32316 526 aa3.14□□□□□ -1.91
XRN1YGL173C TPO5P36029 618 aa3.14□□□□□ -1.91
XRN1YGL173C YKL070WP36087 169 aa3.14□□□□□ -1.91
XRN1YGL173C PXL1P36166 706 aa3.14□□□□□ -1.91
XRN1YGL173C CCT2P39076 527 aaKnown RBP3.14□□□□□ -1.91
XRN1YGL173C NMD5P46970 1048 aa3.14□□□□□ -1.91
XRN1YGL173C TMA22P47089 198 aaPredicted RBP3.14□□□□□ -1.91
XRN1YGL173C CLA4P48562 842 aa3.14□□□□□ -1.91
XRN1YGL173C DLT1Q04216 342 aa3.14□□□□□ -1.91
XRN1YGL173C HEL2Q05580 639 aaKnown RBP3.14□□□□□ -1.91
XRN1YGL173C DCS1Q06151 350 aa3.14□□□□□ -1.91
XRN1YGL173C SMD2Q06217 110 aaKnown RBP3.14□□□□□ -1.91
XRN1YGL173C FRS2P15625 503 aaKnown RBP3.14□□□□□ -1.91
XRN1YGL173C STE4P18851 423 aa3.14□□□□□ -1.91
XRN1YGL173C MAK32P23060 363 aa3.14□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms