RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W SPB1P25582 841 aaPredicted RBP7.48□□□□□ -1.21
SHC1YER096W SPT16P32558 1035 aaKnown RBP7.48□□□□□ -1.21
SHC1YER096W PIM1P36775 1133 aa7.48□□□□□ -1.21
SHC1YER096W SLM4P38247 162 aa7.48□□□□□ -1.21
SHC1YER096W STP2P38704 541 aa7.48□□□□□ -1.21
SHC1YER096W PCF11P39081 626 aaPredicted RBP7.48□□□□□ -1.21
SHC1YER096W YIL001WP40560 513 aa7.48□□□□□ -1.21
SHC1YER096W RMR1P53060 241 aa7.48□□□□□ -1.21
SHC1YER096W SUN4P53616 420 aa7.48□□□□□ -1.21
SHC1YER096W SPR6Q01684 191 aa7.48□□□□□ -1.21
SHC1YER096W SWF1Q04629 336 aa7.48□□□□□ -1.21
SHC1YER096W VPS74Q06385 345 aa7.48□□□□□ -1.21
SHC1YER096W GPI11Q06636 219 aa7.48□□□□□ -1.21
SHC1YER096W YOR342CQ12182 319 aa7.48□□□□□ -1.21
SHC1YER096W Q0010Q9ZZX9 128 aa7.48□□□□□ -1.21
SHC1YER096W CDC5P32562 705 aa7.47□□□□□ -1.21
SHC1YER096W CAT2P32796 670 aaKnown RBP7.47□□□□□ -1.21
SHC1YER096W SWH1P35845 1188 aa7.47□□□□□ -1.21
SHC1YER096W GLG1P36143 616 aa7.47□□□□□ -1.21
SHC1YER096W CEM1P39525 442 aa7.47□□□□□ -1.21
SHC1YER096W SWD1P39706 426 aa7.47□□□□□ -1.21
SHC1YER096W YAL037WP39728 267 aa7.47□□□□□ -1.21
SHC1YER096W YEL020CP39994 560 aa7.47□□□□□ -1.21
SHC1YER096W LRO1P40345 661 aa7.47□□□□□ -1.21
SHC1YER096W PRM10P42946 383 aa7.47□□□□□ -1.21
SHC1YER096W MTQ2Q03920 221 aaPredicted RBP7.47□□□□□ -1.21
SHC1YER096W MUS81Q04149 632 aaPredicted RBP7.47□□□□□ -1.21
SHC1YER096W YOL036WQ08206 761 aa7.47□□□□□ -1.21
SHC1YER096W RRP40Q08285 240 aaKnown RBP7.47□□□□□ -1.21
SHC1YER096W TY4B-PA0A0B7P3V8 1104 aa7.47□□□□□ -1.21
SHC1YER096W RPS17AP02407 136 aaKnown RBP7.47□□□□□ -1.21
SHC1YER096W RPS17BP14127 136 aaKnown RBP7.47□□□□□ -1.21
SHC1YER096W CMP2P14747 604 aa7.47□□□□□ -1.21
SHC1YER096W PET127P32606 800 aa7.47□□□□□ -1.21
SHC1YER096W NTR2P36118 322 aaPredicted RBP7.47□□□□□ -1.21
SHC1YER096W FMP46P36141 133 aaKnown RBP7.47□□□□□ -1.21
SHC1YER096W ARA1P38115 344 aa7.47□□□□□ -1.21
SHC1YER096W YPS6P40583 537 aa7.47□□□□□ -1.21
SHC1YER096W YJL043WP47053 257 aa7.47□□□□□ -1.21
SHC1YER096W RTS3P53289 263 aa7.47□□□□□ -1.21
SHC1YER096W ARE2P53629 642 aaKnown RBP7.47□□□□□ -1.21
SHC1YER096W CSL4P53859 292 aaPredicted RBP7.47□□□□□ -1.21
SHC1YER096W RHO3Q00245 231 aaKnown RBP7.47□□□□□ -1.21
SHC1YER096W RRP45Q05636 305 aaKnown RBP7.47□□□□□ -1.21
SHC1YER096W ARR1Q06596 294 aa7.47□□□□□ -1.21
SHC1YER096W YLL007CQ07799 665 aa7.47□□□□□ -1.21
SHC1YER096W PSY3Q12318 242 aa7.47□□□□□ -1.21
SHC1YER096W NSI1Q12457 570 aa7.47□□□□□ -1.21
SHC1YER096W YPR064WQ12492 139 aa7.47□□□□□ -1.21
SHC1YER096W RAD7P06779 565 aa7.46□□□□□ -1.22
SHC1YER096W SUI3P09064 285 aaKnown RBP7.46□□□□□ -1.22
SHC1YER096W SNF4P12904 322 aa7.46□□□□□ -1.22
SHC1YER096W FUR1P18562 216 aaKnown RBP7.46□□□□□ -1.22
SHC1YER096W ADE1P27616 306 aa7.46□□□□□ -1.22
SHC1YER096W BUD14P27637 709 aa7.46□□□□□ -1.22
SHC1YER096W PEP12P32854 288 aa7.46□□□□□ -1.22
SHC1YER096W SFC1P33303 322 aa7.46□□□□□ -1.22
SHC1YER096W VPS21P36017 210 aaKnown RBP7.46□□□□□ -1.22
SHC1YER096W YBR241CP38142 488 aa7.46□□□□□ -1.22
SHC1YER096W RCK1P38622 512 aa7.46□□□□□ -1.22
SHC1YER096W LYS1P38998 373 aaRIP-Chip data7.46□□□□□ -1.22 RIP-Chip
SHC1YER096W BEM4P39011 633 aa7.46□□□□□ -1.22
SHC1YER096W VHR1P40522 640 aa7.46□□□□□ -1.22
SHC1YER096W YJL049WP47048 450 aa7.46□□□□□ -1.22
SHC1YER096W IGO1P53897 168 aa7.46□□□□□ -1.22
SHC1YER096W YNL095CP53932 642 aa7.46□□□□□ -1.22
SHC1YER096W SVL3Q03088 825 aaKnown RBP7.46□□□□□ -1.22
SHC1YER096W YML096WQ04489 525 aa7.46□□□□□ -1.22
SHC1YER096W PDR8Q06149 701 aa7.46□□□□□ -1.22
SHC1YER096W REX4Q08237 289 aa7.46□□□□□ -1.22
SHC1YER096W WTM1Q12363 437 aaKnown RBP7.46□□□□□ -1.22
SHC1YER096W GCD2P12754 651 aaPredicted RBP7.45□□□□□ -1.22
SHC1YER096W URA4P20051 364 aa7.45□□□□□ -1.22
SHC1YER096W CMK2P22517 447 aa7.45□□□□□ -1.22
SHC1YER096W PEX3P28795 441 aa7.45□□□□□ -1.22
SHC1YER096W ARP2P32381 391 aaKnown RBP7.45□□□□□ -1.22
SHC1YER096W APT2P36973 181 aa7.45□□□□□ -1.22
SHC1YER096W YHR033WP38690 423 aa7.45□□□□□ -1.22
SHC1YER096W ELO1P39540 310 aa7.45□□□□□ -1.22
SHC1YER096W QDR2P40474 542 aa7.45□□□□□ -1.22
SHC1YER096W MNT3P40549 630 aa7.45□□□□□ -1.22
SHC1YER096W UGO1Q03327 502 aa7.45□□□□□ -1.22
SHC1YER096W MFG1Q07684 458 aa7.45□□□□□ -1.22
SHC1YER096W THI73Q07904 523 aa7.45□□□□□ -1.22
SHC1YER096W PFK27Q12471 397 aaPredicted RBP7.45□□□□□ -1.22
SHC1YER096W BRR1Q99177 341 aaPredicted RBP7.45□□□□□ -1.22
SHC1YER096W POL2P21951 2222 aaKnown RBP7.45□□□□□ -1.22
SHC1YER096W TIM9O74700 87 aa7.44□□□□□ -1.22
SHC1YER096W NTG1P31378 399 aa7.44□□□□□ -1.22
SHC1YER096W SKN1P33336 771 aa7.44□□□□□ -1.22
SHC1YER096W RIB1P38066 345 aa7.44□□□□□ -1.22
SHC1YER096W BNA4P38169 460 aa7.44□□□□□ -1.22
SHC1YER096W RSP5P39940 809 aaKnown RBP7.44□□□□□ -1.22
SHC1YER096W SNL1P40548 159 aa7.44□□□□□ -1.22
SHC1YER096W PUN1Q06991 263 aa7.44□□□□□ -1.22
SHC1YER096W TAF3Q12297 353 aa7.44□□□□□ -1.22
SHC1YER096W NTO1Q12311 748 aa7.44□□□□□ -1.22
SHC1YER096W MDM35O60200 86 aa7.43□□□□□ -1.22
SHC1YER096W DOM34P33309 386 aa7.43□□□□□ -1.22
SHC1YER096W UTH1P36135 365 aa7.43□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms