RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeast

Gene SPG3, Length 384 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPG3	YDR504C	PFF1	P38244	976 aa		0.71	□□□□□ -2.3
SPG3	YDR504C	MBB1	P39534	108 aa		0.71	□□□□□ -2.3
SPG3	YDR504C	URB2	P47108	1174 aa		0.71	□□□□□ -2.3
SPG3	YDR504C	YIP1	P53039	248 aa		0.71	□□□□□ -2.3
SPG3	YDR504C	IPI3	P53877	555 aa		0.71	□□□□□ -2.3
SPG3	YDR504C	BUD22	Q04347	519 aa	Known RBP	0.71	□□□□□ -2.3
SPG3	YDR504C	MCH1	Q07376	486 aa		0.71	□□□□□ -2.3
SPG3	YDR504C	JID1	Q12350	301 aa		0.71	□□□□□ -2.3
SPG3	YDR504C	YOL087C	Q99247	1116 aa		0.71	□□□□□ -2.3
SPG3	YDR504C	XRS2	P33301	854 aa		0.7	□□□□□ -2.3
SPG3	YDR504C	GPI18	P38211	433 aa		0.7	□□□□□ -2.3
SPG3	YDR504C	WSS1	P38838	269 aa		0.7	□□□□□ -2.3
SPG3	YDR504C	AFG3	P39925	761 aa		0.7	□□□□□ -2.3
SPG3	YDR504C	BIR1	P47134	954 aa		0.7	□□□□□ -2.3
SPG3	YDR504C	VID22	Q05934	901 aa		0.7	□□□□□ -2.3
SPG3	YDR504C	FMP40	Q08968	688 aa	Predicted RBP	0.7	□□□□□ -2.3
SPG3	YDR504C	BRR1	Q99177	341 aa	Predicted RBP	0.7	□□□□□ -2.3
SPG3	YDR504C	YIH1	P25637	258 aa		0.69	□□□□□ -2.3
SPG3	YDR504C	PAP1	P29468	568 aa	Known RBP	0.69	□□□□□ -2.3
SPG3	YDR504C	MRPL27	P36526	146 aa	Predicted RBP	0.69	□□□□□ -2.3
SPG3	YDR504C	OM14	P38325	134 aa		0.69	□□□□□ -2.3
SPG3	YDR504C	ERP2	P39704	215 aa		0.69	□□□□□ -2.3
SPG3	YDR504C	DOS2	P54858	310 aa		0.69	□□□□□ -2.3
SPG3	YDR504C	YMR102C	Q03177	834 aa		0.69	□□□□□ -2.3
SPG3	YDR504C	RAD30	Q04049	632 aa		0.69	□□□□□ -2.3
SPG3	YDR504C	SNO4	Q04902	237 aa		0.69	□□□□□ -2.3
SPG3	YDR504C	HSP33	Q08914	237 aa	Known RBP	0.69	□□□□□ -2.3
SPG3	YDR504C	HSP32	Q08992	237 aa		0.69	□□□□□ -2.3
SPG3	YDR504C	SPE4	Q12455	300 aa		0.69	□□□□□ -2.3
SPG3	YDR504C	RAV1	P47104	1357 aa		0.69	□□□□□ -2.3
SPG3	YDR504C	HSC82	P15108	705 aa	Known RBP	0.68	□□□□□ -2.3
SPG3	YDR504C	MSR1	P38714	643 aa		0.68	□□□□□ -2.3
SPG3	YDR504C	YMR147W	P40218	223 aa	Known RBP	0.68	□□□□□ -2.3
SPG3	YDR504C	LCL3	P53153	274 aa		0.68	□□□□□ -2.3
SPG3	YDR504C	YML037C	Q03703	340 aa		0.68	□□□□□ -2.3
SPG3	YDR504C	YET2	Q04210	160 aa		0.68	□□□□□ -2.3
SPG3	YDR504C	SMF3	Q12078	473 aa	Predicted RBP	0.68	□□□□□ -2.3
SPG3	YDR504C	ARE2	P53629	642 aa	Known RBP	0.67	□□□□□ -2.3
SPG3	YDR504C	KTR6	P54070	446 aa		0.67	□□□□□ -2.3
SPG3	YDR504C	SLG1	P54867	378 aa		0.67	□□□□□ -2.3
SPG3	YDR504C	NBP2	Q12163	236 aa		0.67	□□□□□ -2.3
SPG3	YDR504C	TOP1	P04786	769 aa		0.66	□□□□□ -2.3
SPG3	YDR504C	CDC50	P25656	391 aa		0.66	□□□□□ -2.3
SPG3	YDR504C	PRR1	P28708	518 aa		0.66	□□□□□ -2.3
SPG3	YDR504C	FRT2	P39734	528 aa		0.66	□□□□□ -2.3
SPG3	YDR504C	GAT2	P40209	560 aa		0.66	□□□□□ -2.3
SPG3	YDR504C	SIP4	P46954	829 aa		0.66	□□□□□ -2.3
SPG3	YDR504C	MTQ1	P53944	314 aa		0.66	□□□□□ -2.3
SPG3	YDR504C	SOV1	Q04748	898 aa		0.66	□□□□□ -2.3
SPG3	YDR504C	APE2	P32454	952 aa	Known RBP	0.65	□□□□□ -2.31
SPG3	YDR504C	CBP4	P37267	147 aa		0.65	□□□□□ -2.31
SPG3	YDR504C	STB1	P42845	420 aa		0.65	□□□□□ -2.31
SPG3	YDR504C	BNS1	P50084	137 aa		0.65	□□□□□ -2.31
SPG3	YDR504C	NUP116	Q02630	1113 aa		0.65	□□□□□ -2.31
SPG3	YDR504C	VPS38	Q05919	439 aa		0.65	□□□□□ -2.31
SPG3	YDR504C	RIF2	Q06208	395 aa		0.65	□□□□□ -2.31
SPG3	YDR504C	FOL3	Q12676	427 aa	Predicted RBP	0.65	□□□□□ -2.31
SPG3	YDR504C	SSB1	P11484	613 aa	Known RBP	0.64	□□□□□ -2.31
SPG3	YDR504C	PUT4	P15380	627 aa		0.64	□□□□□ -2.31
SPG3	YDR504C	KAR3	P17119	729 aa		0.64	□□□□□ -2.31
SPG3	YDR504C	HEL1	P36113	551 aa		0.64	□□□□□ -2.31
SPG3	YDR504C	YER010C	P40011	234 aa		0.64	□□□□□ -2.31
SPG3	YDR504C	SSB2	P40150	613 aa	Known RBP	0.64	□□□□□ -2.31
SPG3	YDR504C	YFR057W	P43625	151 aa		0.64	□□□□□ -2.31
SPG3	YDR504C	HOT1	Q03213	719 aa		0.64	□□□□□ -2.31
SPG3	YDR504C	POL4	P25615	582 aa		0.63	□□□□□ -2.31
SPG3	YDR504C	ALG5	P40350	334 aa		0.63	□□□□□ -2.31
SPG3	YDR504C	YJL144W	P47009	104 aa		0.63	□□□□□ -2.31
SPG3	YDR504C	NRM1	P53718	249 aa		0.63	□□□□□ -2.31
SPG3	YDR504C	YNR048W	P53740	393 aa		0.63	□□□□□ -2.31
SPG3	YDR504C	FRE4	P53746	719 aa		0.63	□□□□□ -2.31
SPG3	YDR504C	MSI1	P13712	422 aa		0.62	□□□□□ -2.31
SPG3	YDR504C	SAG1	P20840	650 aa		0.62	□□□□□ -2.31
SPG3	YDR504C	ECM25	P32525	599 aa		0.62	□□□□□ -2.31
SPG3	YDR504C	UTR5	P32630	166 aa		0.62	□□□□□ -2.31
SPG3	YDR504C	ECT1	P33412	323 aa		0.62	□□□□□ -2.31
SPG3	YDR504C	IMD4	P50094	524 aa	Known RBP	0.62	□□□□□ -2.31
SPG3	YDR504C	OCA1	P50946	238 aa	Predicted RBP	0.62	□□□□□ -2.31
SPG3	YDR504C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	0.61	□□□□□ -2.31	not detected
SPG3	YDR504C	AXL2	P38928	823 aa		0.61	□□□□□ -2.31
SPG3	YDR504C	CCT6	P39079	546 aa		0.61	□□□□□ -2.31
SPG3	YDR504C	JLP2	P40206	208 aa		0.61	□□□□□ -2.31
SPG3	YDR504C	EGT2	P42835	1041 aa		0.61	□□□□□ -2.31
SPG3	YDR504C	ATG18	P43601	500 aa		0.61	□□□□□ -2.31
SPG3	YDR504C	RHO5	P53879	331 aa	Known RBP	0.61	□□□□□ -2.31
SPG3	YDR504C	RTP1	Q12751	981 aa		0.61	□□□□□ -2.31
SPG3	YDR504C	YPR096C	O13587	100 aa		0.6	□□□□□ -2.31
SPG3	YDR504C	RPB5	P20434	215 aa		0.6	□□□□□ -2.31
SPG3	YDR504C	PEP3	P27801	918 aa		0.6	□□□□□ -2.31
SPG3	YDR504C	YPS1	P32329	569 aa		0.6	□□□□□ -2.31
SPG3	YDR504C	ARC1	P46672	376 aa	Known RBP	0.6	□□□□□ -2.31
SPG3	YDR504C	NBP1	P52919	319 aa	Predicted RBP	0.6	□□□□□ -2.31
SPG3	YDR504C	YGR067C	P53243	804 aa		0.6	□□□□□ -2.31
SPG3	YDR504C	TIR4	Q12218	487 aa	Predicted RBP	0.6	□□□□□ -2.31
SPG3	YDR504C	TPI1	P00942	248 aa	Known RBP	0.59	□□□□□ -2.31
SPG3	YDR504C	SCH9	P11792	824 aa	Known RBP	0.59	□□□□□ -2.31
SPG3	YDR504C	PRE8	P23639	250 aa		0.59	□□□□□ -2.31
SPG3	YDR504C	CHL4	P38907	458 aa		0.59	□□□□□ -2.31
SPG3	YDR504C	AZR1	P50080	613 aa		0.59	□□□□□ -2.31
SPG3	YDR504C	ARG4	P04076	463 aa	Predicted RBP	0.58	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms