RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C LOT6Q07923 191 aa5.52□□□□□ -1.53
SEC20YDR498C TRM8Q12009 286 aa5.52□□□□□ -1.53
SEC20YDR498C YDR056CQ12025 205 aa5.52□□□□□ -1.53
SEC20YDR498C YDL176WQ12027 708 aa5.52□□□□□ -1.53
SEC20YDR498C RGT2Q12300 763 aa5.52□□□□□ -1.53
SEC20YDR498C HRP1Q99383 534 aaKnown RBP5.52□□□□□ -1.53
SEC20YDR498C RPS9AO13516 197 aaKnown RBP5.51□□□□□ -1.53
SEC20YDR498C AI3P03877 415 aa5.51□□□□□ -1.53
SEC20YDR498C RPS21AP0C0V8 87 aaKnown RBP5.51□□□□□ -1.53
SEC20YDR498C BET2P20133 325 aa5.51□□□□□ -1.53
SEC20YDR498C MSB1P21339 1137 aaKnown RBP5.51□□□□□ -1.53
SEC20YDR498C IDH2P28241 369 aaKnown RBP5.51□□□□□ -1.53
SEC20YDR498C UBC8P28263 218 aa5.51□□□□□ -1.53
SEC20YDR498C NTG1P31378 399 aa5.51□□□□□ -1.53
SEC20YDR498C SAC1P32368 623 aaKnown RBP5.51□□□□□ -1.53
SEC20YDR498C ARP2P32381 391 aaKnown RBP5.51□□□□□ -1.53
SEC20YDR498C TFB1P32776 642 aa5.51□□□□□ -1.53
SEC20YDR498C YKL100CP34248 587 aa5.51□□□□□ -1.53
SEC20YDR498C RPF2P36160 344 aaKnown RBP5.51□□□□□ -1.53
SEC20YDR498C ARA1P38115 344 aa5.51□□□□□ -1.53
SEC20YDR498C COS111P38308 924 aa5.51□□□□□ -1.53
SEC20YDR498C STP2P38704 541 aa5.51□□□□□ -1.53
SEC20YDR498C YPT35P38815 214 aaKnown RBP5.51□□□□□ -1.53
SEC20YDR498C OYE3P41816 400 aaPredicted RBP5.51□□□□□ -1.53
SEC20YDR498C GYP8P43570 497 aa5.51□□□□□ -1.53
SEC20YDR498C LSB3P43603 459 aaKnown RBP5.51□□□□□ -1.53
SEC20YDR498C ATP22P50273 684 aaPredicted RBP5.51□□□□□ -1.53
SEC20YDR498C MDM34P53083 459 aa5.51□□□□□ -1.53
SEC20YDR498C ZRG17P53735 605 aa5.51□□□□□ -1.53
SEC20YDR498C YNR061CP53747 219 aa5.51□□□□□ -1.53
SEC20YDR498C SNO2P53823 222 aa5.51□□□□□ -1.53
SEC20YDR498C CSL4P53859 292 aaPredicted RBP5.51□□□□□ -1.53
SEC20YDR498C SVL3Q03088 825 aaKnown RBP5.51□□□□□ -1.53
SEC20YDR498C EAR1Q03212 550 aa5.51□□□□□ -1.53
SEC20YDR498C UGO1Q03327 502 aa5.51□□□□□ -1.53
SEC20YDR498C YMR034CQ05131 434 aaPredicted RBP5.51□□□□□ -1.53
SEC20YDR498C RRP45Q05636 305 aaKnown RBP5.51□□□□□ -1.53
SEC20YDR498C SWA2Q06677 668 aa5.51□□□□□ -1.53
SEC20YDR498C MFG1Q07684 458 aa5.51□□□□□ -1.53
SEC20YDR498C NSE1Q07913 336 aa5.51□□□□□ -1.53
SEC20YDR498C VPS68Q12016 184 aa5.51□□□□□ -1.53
SEC20YDR498C HAL9Q12180 1030 aa5.51□□□□□ -1.53
SEC20YDR498C YPL119C-AQ3E751 87 aa5.51□□□□□ -1.53
SEC20YDR498C NAG1Q8TGN9 163 aa5.51□□□□□ -1.53
SEC20YDR498C CBP2P03874 630 aaPredicted RBP5.5□□□□□ -1.53
SEC20YDR498C CYT1P07143 309 aa5.5□□□□□ -1.53
SEC20YDR498C HIS5P07172 385 aa5.5□□□□□ -1.53
SEC20YDR498C CBS2P14905 389 aa5.5□□□□□ -1.53
SEC20YDR498C PUP1P25043 261 aa5.5□□□□□ -1.53
SEC20YDR498C PUP3P25451 205 aaKnown RBP5.5□□□□□ -1.53
SEC20YDR498C SYP1P25623 870 aaKnown RBP5.5□□□□□ -1.53
SEC20YDR498C PEX3P28795 441 aa5.5□□□□□ -1.53
SEC20YDR498C GSH1P32477 678 aa5.5□□□□□ -1.53
SEC20YDR498C CDC5P32562 705 aa5.5□□□□□ -1.53
SEC20YDR498C RML2P32611 393 aa5.5□□□□□ -1.53
SEC20YDR498C SPO23P33757 523 aa5.5□□□□□ -1.53
SEC20YDR498C DEF1P35732 738 aaKnown RBP5.5□□□□□ -1.53
SEC20YDR498C KKQ8P36004 724 aa5.5□□□□□ -1.53
SEC20YDR498C YCR087C-AP37263 153 aa5.5□□□□□ -1.53
SEC20YDR498C YHR033WP38690 423 aa5.5□□□□□ -1.53
SEC20YDR498C SPF1P39986 1215 aaKnown RBP5.5□□□□□ -1.53
SEC20YDR498C QDR2P40474 542 aa5.5□□□□□ -1.53
SEC20YDR498C YJL043WP47053 257 aa5.5□□□□□ -1.53
SEC20YDR498C NNF1P47149 201 aa5.5□□□□□ -1.53
SEC20YDR498C RAD30Q04049 632 aa5.5□□□□□ -1.53
SEC20YDR498C PEX12Q04370 399 aa5.5□□□□□ -1.53
SEC20YDR498C YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
SEC20YDR498C MCA1Q08601 432 aa5.5□□□□□ -1.53
SEC20YDR498C SAM4Q08985 325 aaKnown RBP5.5□□□□□ -1.53
SEC20YDR498C MCD1Q12158 566 aa5.5□□□□□ -1.53
SEC20YDR498C SRN2Q99176 213 aa5.5□□□□□ -1.53
SEC20YDR498C MSB2P32334 1306 aa5.49□□□□□ -1.53
SEC20YDR498C INH1P01097 85 aa5.49□□□□□ -1.53
SEC20YDR498C GAL3P13045 520 aa5.49□□□□□ -1.53
SEC20YDR498C IMG2P25642 146 aaPredicted RBP5.49□□□□□ -1.53
SEC20YDR498C APE2P32454 952 aaKnown RBP5.49□□□□□ -1.53
SEC20YDR498C CDC3P32457 520 aaKnown RBP5.49□□□□□ -1.53
SEC20YDR498C NRP1P32770 719 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
SEC20YDR498C CAT2P32796 670 aaKnown RBP5.49□□□□□ -1.53
SEC20YDR498C ECM8P38246 354 aa5.49□□□□□ -1.53
SEC20YDR498C RCK1P38622 512 aa5.49□□□□□ -1.53
SEC20YDR498C RBG1P39729 369 aa5.49□□□□□ -1.53
SEC20YDR498C AVT6P40074 448 aa5.49□□□□□ -1.53
SEC20YDR498C CAB2P40506 365 aa5.49□□□□□ -1.53
SEC20YDR498C ROM1P53046 1155 aa5.49□□□□□ -1.53
SEC20YDR498C COS12P53053 380 aa5.49□□□□□ -1.53
SEC20YDR498C YNR068CP53754 272 aa5.49□□□□□ -1.53
SEC20YDR498C IRC15Q02733 499 aa5.49□□□□□ -1.53
SEC20YDR498C MSC1Q03104 513 aa5.49□□□□□ -1.53
SEC20YDR498C CCE1Q03702 353 aa5.49□□□□□ -1.53
SEC20YDR498C VPS74Q06385 345 aa5.49□□□□□ -1.53
SEC20YDR498C TY1A-DR3Q12441 440 aa5.49□□□□□ -1.53
SEC20YDR498C YOL159C-AQ3E769 90 aa5.49□□□□□ -1.53
SEC20YDR498C MPD2Q99316 277 aa5.49□□□□□ -1.53
SEC20YDR498C Q0010Q9ZZX9 128 aa5.49□□□□□ -1.53
SEC20YDR498C FAS1P07149 2051 aaKnown RBP5.49□□□□□ -1.53
SEC20YDR498C TY4B-PA0A0B7P3V8 1104 aa5.48□□□□□ -1.53
SEC20YDR498C SEM1O94742 89 aa5.48□□□□□ -1.53
SEC20YDR498C YKR104WP0CE69 306 aa5.48□□□□□ -1.53
SEC20YDR498C RSR1P13856 272 aa5.48□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms