RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	KAR9	P32526	644 aa		1.56	□□□□□ -2.16
CSN9	YDR179C	WBP1	P33767	430 aa	Known RBP	1.56	□□□□□ -2.16
CSN9	YDR179C	AIM10	P39965	576 aa	Known RBP	1.56	□□□□□ -2.16
CSN9	YDR179C	TPM2	P40414	161 aa		1.56	□□□□□ -2.16
CSN9	YDR179C	LYS14	P40971	790 aa		1.56	□□□□□ -2.16
CSN9	YDR179C	RMD9	P53140	646 aa	Known RBP	1.56	□□□□□ -2.16
CSN9	YDR179C	CAF130	P53280	1122 aa	Predicted RBP	1.56	□□□□□ -2.16
CSN9	YDR179C	MKC7	P53379	596 aa		1.56	□□□□□ -2.16
CSN9	YDR179C	YNR048W	P53740	393 aa		1.56	□□□□□ -2.16
CSN9	YDR179C	RPC11	Q04307	110 aa	Predicted RBP	1.56	□□□□□ -2.16
CSN9	YDR179C	YPR091C	Q06833	770 aa		1.56	□□□□□ -2.16
CSN9	YDR179C	SNX3	Q08826	162 aa	Known RBP	1.56	□□□□□ -2.16
CSN9	YDR179C	PLP2	Q12017	286 aa		1.56	□□□□□ -2.16
CSN9	YDR179C	SEC39	Q12745	709 aa		1.56	□□□□□ -2.16
CSN9	YDR179C	BI3	Q9ZZW7	517 aa		1.56	□□□□□ -2.16
CSN9	YDR179C	PSK1	P31374	1356 aa		1.56	□□□□□ -2.16
CSN9	YDR179C	GAL80	P04387	435 aa		1.55	□□□□□ -2.16
CSN9	YDR179C	MRE11	P32829	692 aa		1.55	□□□□□ -2.16
CSN9	YDR179C	VPS24	P36095	224 aa	Known RBP	1.55	□□□□□ -2.16
CSN9	YDR179C	SEO1	P39709	593 aa		1.55	□□□□□ -2.16
CSN9	YDR179C	CHS6	P40955	746 aa		1.55	□□□□□ -2.16
CSN9	YDR179C	PCP1	P53259	346 aa		1.55	□□□□□ -2.16
CSN9	YDR179C	ARE2	P53629	642 aa	Known RBP	1.55	□□□□□ -2.16
CSN9	YDR179C	IGO1	P53897	168 aa		1.55	□□□□□ -2.16
CSN9	YDR179C	NGL3	Q03210	505 aa		1.55	□□□□□ -2.16
CSN9	YDR179C	JID1	Q12350	301 aa		1.55	□□□□□ -2.16
CSN9	YDR179C	RRD2	Q12461	358 aa		1.55	□□□□□ -2.16
CSN9	YDR179C	TEF1	P02994	458 aa	Known RBP	1.54	□□□□□ -2.16
CSN9	YDR179C	SLY1	P22213	666 aa		1.54	□□□□□ -2.16
CSN9	YDR179C	DPB3	P27344	201 aa		1.54	□□□□□ -2.16
CSN9	YDR179C	PRR1	P28708	518 aa		1.54	□□□□□ -2.16
CSN9	YDR179C	ECM25	P32525	599 aa		1.54	□□□□□ -2.16
CSN9	YDR179C	SPT10	P35208	640 aa		1.54	□□□□□ -2.16
CSN9	YDR179C	YMR147W	P40218	223 aa	Known RBP	1.54	□□□□□ -2.16
CSN9	YDR179C	YGL108C	P53139	140 aa		1.54	□□□□□ -2.16
CSN9	YDR179C	MTQ1	P53944	314 aa		1.54	□□□□□ -2.16
CSN9	YDR179C	GIR2	Q03768	265 aa	Predicted RBP	1.54	□□□□□ -2.16
CSN9	YDR179C	YPR022C	Q12139	1133 aa		1.54	□□□□□ -2.16
CSN9	YDR179C	SEM1	O94742	89 aa		1.53	□□□□□ -2.16
CSN9	YDR179C	NAM2	P11325	894 aa		1.53	□□□□□ -2.16
CSN9	YDR179C	ATP10	P18496	279 aa		1.53	□□□□□ -2.16
CSN9	YDR179C	RAD14	P28519	371 aa		1.53	□□□□□ -2.16
CSN9	YDR179C	APE2	P32454	952 aa	Known RBP	1.53	□□□□□ -2.16
CSN9	YDR179C	CYS4	P32582	507 aa	Known RBP	1.53	□□□□□ -2.16
CSN9	YDR179C	BMT2	P38278	337 aa		1.53	□□□□□ -2.16
CSN9	YDR179C	TIM17	P39515	158 aa		1.53	□□□□□ -2.16
CSN9	YDR179C	TFG2	P41896	400 aa	Predicted RBP	1.53	□□□□□ -2.16
CSN9	YDR179C	MDE1	P47095	244 aa		1.53	□□□□□ -2.16
CSN9	YDR179C	FRE4	P53746	719 aa		1.53	□□□□□ -2.16
CSN9	YDR179C	ADA2	Q02336	434 aa		1.53	□□□□□ -2.16
CSN9	YDR179C	HSP31	Q04432	237 aa		1.53	□□□□□ -2.16
CSN9	YDR179C	YPS3	Q12303	508 aa		1.53	□□□□□ -2.16
CSN9	YDR179C	IZH2	Q12442	317 aa		1.53	□□□□□ -2.16
CSN9	YDR179C	CYC3	P06182	269 aa		1.52	□□□□□ -2.17
CSN9	YDR179C	CBS1	P14066	229 aa		1.52	□□□□□ -2.17
CSN9	YDR179C	AAT2	P23542	418 aa	Known RBP	1.52	□□□□□ -2.17
CSN9	YDR179C	AFG1	P32317	509 aa		1.52	□□□□□ -2.17
CSN9	YDR179C	RML2	P32611	393 aa		1.52	□□□□□ -2.17
CSN9	YDR179C	CSE2	P33308	149 aa		1.52	□□□□□ -2.17
CSN9	YDR179C	LYS1	P38998	373 aa	RIP-Chip data	1.52	□□□□□ -2.17	not detected
CSN9	YDR179C	MIG3	P39943	394 aa		1.52	□□□□□ -2.17
CSN9	YDR179C	PET130	P47065	347 aa		1.52	□□□□□ -2.17
CSN9	YDR179C	FLC3	P53121	802 aa		1.52	□□□□□ -2.17
CSN9	YDR179C	TWF1	P53250	332 aa		1.52	□□□□□ -2.17
CSN9	YDR179C	YDR387C	Q04162	555 aa		1.52	□□□□□ -2.17
CSN9	YDR179C	REX4	Q08237	289 aa		1.52	□□□□□ -2.17
CSN9	YDR179C	FAB1	P34756	2278 aa		1.52	□□□□□ -2.17
CSN9	YDR179C	FOB1	O13329	566 aa		1.51	□□□□□ -2.17
CSN9	YDR179C	RPB5	P20434	215 aa		1.51	□□□□□ -2.17
CSN9	YDR179C	RPI1	P23250	407 aa	Known RBP	1.51	□□□□□ -2.17
CSN9	YDR179C	THI2	P38141	450 aa		1.51	□□□□□ -2.17
CSN9	YDR179C	YBR137W	P38276	179 aa		1.51	□□□□□ -2.17
CSN9	YDR179C	RTC2	P38279	296 aa		1.51	□□□□□ -2.17
CSN9	YDR179C	YHR054C	P38780	354 aa		1.51	□□□□□ -2.17
CSN9	YDR179C	YHR131C	P38835	850 aa		1.51	□□□□□ -2.17
CSN9	YDR179C	KEL1	P38853	1164 aa	Known RBP	1.51	□□□□□ -2.17
CSN9	YDR179C	PCF11	P39081	626 aa	Predicted RBP	1.51	□□□□□ -2.17
CSN9	YDR179C	SSU1	P41930	458 aa		1.51	□□□□□ -2.17
CSN9	YDR179C	RMD8	P43620	662 aa		1.51	□□□□□ -2.17
CSN9	YDR179C	CRH1	P53301	507 aa		1.51	□□□□□ -2.17
CSN9	YDR179C	MEP3	P53390	489 aa		1.51	□□□□□ -2.17
CSN9	YDR179C	RHO5	P53879	331 aa	Known RBP	1.51	□□□□□ -2.17
CSN9	YDR179C	YRM1	Q12340	786 aa		1.51	□□□□□ -2.17
CSN9	YDR179C	SNU66	Q12420	587 aa	Predicted RBP	1.51	□□□□□ -2.17
CSN9	YDR179C	CBP6	P07253	162 aa	Predicted RBP	1.5	□□□□□ -2.17
CSN9	YDR179C	SPS4	P09937	338 aa		1.5	□□□□□ -2.17
CSN9	YDR179C	SPB1	P25582	841 aa	Predicted RBP	1.5	□□□□□ -2.17
CSN9	YDR179C	ITR1	P30605	584 aa		1.5	□□□□□ -2.17
CSN9	YDR179C	SSH4	P32343	579 aa		1.5	□□□□□ -2.17
CSN9	YDR179C	PRP21	P32524	280 aa	Predicted RBP	1.5	□□□□□ -2.17
CSN9	YDR179C	SEC66	P33754	206 aa		1.5	□□□□□ -2.17
CSN9	YDR179C	CCT2	P39076	527 aa	Known RBP	1.5	□□□□□ -2.17
CSN9	YDR179C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	1.5	□□□□□ -2.17	not detected
CSN9	YDR179C	VTC2	P43585	828 aa		1.5	□□□□□ -2.17
CSN9	YDR179C	YGR149W	P48236	432 aa		1.5	□□□□□ -2.17
CSN9	YDR179C	CMS1	Q07897	291 aa	Known RBP	1.5	□□□□□ -2.17
CSN9	YDR179C	PRM7	Q12459	698 aa		1.5	□□□□□ -2.17
CSN9	YDR179C	RTP1	Q12751	981 aa		1.5	□□□□□ -2.17
CSN9	YDR179C	GPH1	P06738	902 aa	Known RBP	1.49	□□□□□ -2.17
CSN9	YDR179C	DPH2	P32461	534 aa		1.49	□□□□□ -2.17

Retrieved 100 of 5,963 RNA–protein pairs in 46.1 ms