RNA–Protein interactions for RNA: YDR085C

AFR1, Transcript of Protein required for pheromone-induced projection (shmoo) formation, yeastyeast

Gene AFR1, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFR1YDR085C SSN8P47821 323 aa2.66□□□□□ -1.98
AFR1YDR085C YDR387CQ04162 555 aa2.66□□□□□ -1.98
AFR1YDR085C HSP31Q04432 237 aa2.66□□□□□ -1.98
AFR1YDR085C MUM3Q08750 479 aa2.66□□□□□ -1.98
AFR1YDR085C RAD61Q99359 647 aa2.66□□□□□ -1.98
AFR1YDR085C SPS4P09937 338 aa2.65□□□□□ -1.98
AFR1YDR085C MRP7P12687 371 aa2.65□□□□□ -1.98
AFR1YDR085C CDC60P26637 1090 aaKnown RBP2.65□□□□□ -1.98
AFR1YDR085C ITR1P30605 584 aa2.65□□□□□ -1.98
AFR1YDR085C HXT1P32465 570 aa2.65□□□□□ -1.98
AFR1YDR085C ECM25P32525 599 aa2.65□□□□□ -1.98
AFR1YDR085C PIM1P36775 1133 aa2.65□□□□□ -1.98
AFR1YDR085C SMF1P38925 575 aa2.65□□□□□ -1.98
AFR1YDR085C PRM5P40476 318 aa2.65□□□□□ -1.98
AFR1YDR085C DSL1P53847 754 aa2.65□□□□□ -1.98
AFR1YDR085C HXT11P54862 567 aa2.65□□□□□ -1.98
AFR1YDR085C BSC6Q08280 497 aa2.65□□□□□ -1.98
AFR1YDR085C YPR022CQ12139 1133 aa2.65□□□□□ -1.98
AFR1YDR085C YLR278CQ05854 1341 aa2.65□□□□□ -1.99
AFR1YDR085C MET17P06106 444 aa2.65□□□□□ -1.99
AFR1YDR085C SPR1P32603 445 aa2.65□□□□□ -1.99
AFR1YDR085C GIR2Q03768 265 aaPredicted RBP2.65□□□□□ -1.99
AFR1YDR085C TIM18Q08749 192 aa2.65□□□□□ -1.99
AFR1YDR085C CKA1P15790 372 aa2.64□□□□□ -1.99
AFR1YDR085C PPH22P23595 377 aa2.64□□□□□ -1.99
AFR1YDR085C ROX1P25042 368 aa2.64□□□□□ -1.99
AFR1YDR085C HXT3P32466 567 aaKnown RBP2.64□□□□□ -1.99
AFR1YDR085C LAM5P43560 674 aa2.64□□□□□ -1.99
AFR1YDR085C VTC2P43585 828 aa2.64□□□□□ -1.99
AFR1YDR085C NCA3P46955 337 aa2.64□□□□□ -1.99
AFR1YDR085C YLR152CP54072 576 aa2.64□□□□□ -1.99
AFR1YDR085C HRI1Q05905 244 aaKnown RBP2.64□□□□□ -1.99
AFR1YDR085C BUD21Q08492 214 aaPredicted RBP2.64□□□□□ -1.99
AFR1YDR085C PKH2Q12236 1081 aaKnown RBP2.64□□□□□ -1.99
AFR1YDR085C RBD2Q12270 262 aa2.64□□□□□ -1.99
AFR1YDR085C GPH1P06738 902 aaKnown RBP2.63□□□□□ -1.99
AFR1YDR085C RIP1P08067 215 aa2.63□□□□□ -1.99
AFR1YDR085C SEC63P14906 663 aa2.63□□□□□ -1.99
AFR1YDR085C PET123P17558 318 aa2.63□□□□□ -1.99
AFR1YDR085C APE2P32454 952 aaKnown RBP2.63□□□□□ -1.99
AFR1YDR085C MTC6P38849 526 aa2.63□□□□□ -1.99
AFR1YDR085C PAN6P40459 309 aa2.63□□□□□ -1.99
AFR1YDR085C ECM27P47144 725 aa2.63□□□□□ -1.99
AFR1YDR085C TIS11P47977 285 aa2.63□□□□□ -1.99
AFR1YDR085C YGL039WP53183 348 aaKnown RBP2.63□□□□□ -1.99
AFR1YDR085C YBR137WP38276 179 aa2.62□□□□□ -1.99
AFR1YDR085C OTU2P38747 307 aaKnown RBP2.62□□□□□ -1.99
AFR1YDR085C ESL1P40456 1118 aa2.62□□□□□ -1.99
AFR1YDR085C SAS2P40963 338 aa2.62□□□□□ -1.99
AFR1YDR085C YNR048WP53740 393 aa2.62□□□□□ -1.99
AFR1YDR085C FRE4P53746 719 aa2.62□□□□□ -1.99
AFR1YDR085C YIF1P53845 314 aaKnown RBP2.62□□□□□ -1.99
AFR1YDR085C YMR181CQ03231 154 aa2.62□□□□□ -1.99
AFR1YDR085C HER2Q03557 464 aa2.62□□□□□ -1.99
AFR1YDR085C SYF1Q04048 859 aaPredicted RBP2.62□□□□□ -1.99
AFR1YDR085C PPM1Q04081 328 aa2.62□□□□□ -1.99
AFR1YDR085C HIS4P00815 799 aaKnown RBP2.62□□□□□ -1.99
AFR1YDR085C RPI1P23250 407 aaKnown RBP2.62□□□□□ -1.99
AFR1YDR085C VHC1P38329 1120 aa2.62□□□□□ -1.99
AFR1YDR085C MTM1P53320 366 aa2.62□□□□□ -1.99
AFR1YDR085C MRPL19P53875 158 aa2.62□□□□□ -1.99
AFR1YDR085C RPA49Q01080 415 aaPredicted RBP2.62□□□□□ -1.99
AFR1YDR085C VTA1Q06263 330 aa2.62□□□□□ -1.99
AFR1YDR085C RPS8AP0CX39 200 aaKnown RBP2.61□□□□□ -1.99
AFR1YDR085C RPS8BP0CX40 200 aaKnown RBP2.61□□□□□ -1.99
AFR1YDR085C RPL3P14126 387 aaKnown RBP2.61□□□□□ -1.99
AFR1YDR085C SLY1P22213 666 aa2.61□□□□□ -1.99
AFR1YDR085C DAL2P25335 343 aa2.61□□□□□ -1.99
AFR1YDR085C RVS161P25343 265 aaKnown RBP2.61□□□□□ -1.99
AFR1YDR085C MSG5P38590 489 aa2.61□□□□□ -1.99
AFR1YDR085C RFC3P38629 340 aa2.61□□□□□ -1.99
AFR1YDR085C LYS1P38998 373 aaRIP-Chip data2.61□□□□□ -1.99not detected
AFR1YDR085C TEF1P02994 458 aaKnown RBP2.6□□□□□ -1.99
AFR1YDR085C NDE1P40215 560 aa2.6□□□□□ -1.99
AFR1YDR085C SIL1Q08199 421 aa2.6□□□□□ -1.99
AFR1YDR085C FDH1Q08911 376 aa2.6□□□□□ -1.99
AFR1YDR085C ORT1Q12375 292 aa2.6□□□□□ -1.99
AFR1YDR085C YOL159C-AQ3E769 90 aa2.6□□□□□ -1.99
AFR1YDR085C ARG4P04076 463 aaPredicted RBP2.6□□□□□ -1.99
AFR1YDR085C MNS1P32906 549 aa2.6□□□□□ -1.99
AFR1YDR085C YHR054CP38780 354 aa2.6□□□□□ -1.99
AFR1YDR085C MDG1P53885 366 aa2.6□□□□□ -1.99
AFR1YDR085C SNX3Q08826 162 aaKnown RBP2.6□□□□□ -1.99
AFR1YDR085C RTN2Q12443 393 aa2.6□□□□□ -1.99
AFR1YDR085C RTP1Q12751 981 aa2.6□□□□□ -1.99
AFR1YDR085C SOD1P00445 154 aaKnown RBP2.59□□□□□ -1.99
AFR1YDR085C TRP1P00912 224 aa2.59□□□□□ -1.99
AFR1YDR085C NFT1P0CE68 1218 aa2.59□□□□□ -1.99
AFR1YDR085C SIN4P32259 974 aa2.59□□□□□ -1.99
AFR1YDR085C DLD2P46681 530 aaKnown RBP2.59□□□□□ -1.99
AFR1YDR085C YJR011CP47086 261 aaPredicted RBP2.59□□□□□ -1.99
AFR1YDR085C MNP1P53163 194 aaPredicted RBP2.59□□□□□ -1.99
AFR1YDR085C CWC25P53854 179 aaKnown RBP2.59□□□□□ -1.99
AFR1YDR085C TAF11Q04226 346 aa2.59□□□□□ -1.99
AFR1YDR085C SGT1Q08446 395 aa2.59□□□□□ -1.99
AFR1YDR085C RMD5Q12508 421 aa2.59□□□□□ -1.99
AFR1YDR085C TOP1P04786 769 aa2.58□□□□□ -2
AFR1YDR085C LSB5P25369 354 aa2.58□□□□□ -2
AFR1YDR085C ERG3P32353 365 aa2.58□□□□□ -2
AFR1YDR085C RML2P32611 393 aa2.58□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms