RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C YDR415CQ04033 374 aaPredicted RBP3.87□□□□□ -1.79
SHU2YDR078C SYO1Q07395 620 aa3.87□□□□□ -1.79
SHU2YDR078C SOR2Q07786 357 aa3.87□□□□□ -1.79
SHU2YDR078C YDL009CQ12210 107 aa3.87□□□□□ -1.79
SHU2YDR078C COX3P00420 269 aa3.86□□□□□ -1.79
SHU2YDR078C YML002WP0CF17 737 aa3.86□□□□□ -1.79
SHU2YDR078C HNM1P19807 563 aa3.86□□□□□ -1.79
SHU2YDR078C YNK1P36010 153 aaKnown RBP3.86□□□□□ -1.79
SHU2YDR078C RRN10P38204 145 aa3.86□□□□□ -1.79
SHU2YDR078C VPS52P39904 641 aa3.86□□□□□ -1.79
SHU2YDR078C YIR014WP40570 242 aa3.86□□□□□ -1.79
SHU2YDR078C SCW4P53334 386 aaKnown RBP3.86□□□□□ -1.79
SHU2YDR078C SEC5P89102 971 aa3.86□□□□□ -1.79
SHU2YDR078C PRP42Q03776 544 aaKnown RBP3.86□□□□□ -1.79
SHU2YDR078C YMR034CQ05131 434 aaPredicted RBP3.86□□□□□ -1.79
SHU2YDR078C YLR281CQ05863 155 aa3.86□□□□□ -1.79
SHU2YDR078C MRPL51Q06090 140 aaPredicted RBP3.86□□□□□ -1.79
SHU2YDR078C YEH2Q07950 538 aa3.86□□□□□ -1.79
SHU2YDR078C HIS4P00815 799 aaKnown RBP3.85□□□□□ -1.79
SHU2YDR078C ADE4P04046 510 aaKnown RBP3.85□□□□□ -1.79
SHU2YDR078C PMR1P13586 950 aa3.85□□□□□ -1.79
SHU2YDR078C GLN3P18494 730 aa3.85□□□□□ -1.79
SHU2YDR078C RPI1P23250 407 aaKnown RBP3.85□□□□□ -1.79
SHU2YDR078C POT1P27796 417 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
SHU2YDR078C APE2P32454 952 aaKnown RBP3.85□□□□□ -1.79
SHU2YDR078C ECM25P32525 599 aa3.85□□□□□ -1.79
SHU2YDR078C ATO2P32907 282 aa3.85□□□□□ -1.79
SHU2YDR078C LAS1P36146 502 aaPredicted RBP3.85□□□□□ -1.79
SHU2YDR078C DAD2P36162 133 aa3.85□□□□□ -1.79
SHU2YDR078C OLA1P38219 394 aaKnown RBP3.85□□□□□ -1.79
SHU2YDR078C PCA1P38360 1216 aa3.85□□□□□ -1.79
SHU2YDR078C MLH1P38920 769 aa3.85□□□□□ -1.79
SHU2YDR078C TRS85P46944 698 aa3.85□□□□□ -1.79
SHU2YDR078C PHO86P46956 311 aa3.85□□□□□ -1.79
SHU2YDR078C TOF1P53840 1238 aa3.85□□□□□ -1.79
SHU2YDR078C YIF1P53845 314 aaKnown RBP3.85□□□□□ -1.79
SHU2YDR078C IRC15Q02733 499 aa3.85□□□□□ -1.79
SHU2YDR078C RLI1Q03195 608 aaKnown RBP3.85□□□□□ -1.79
SHU2YDR078C RPN9Q04062 393 aaKnown RBP3.85□□□□□ -1.79
SHU2YDR078C YDR387CQ04162 555 aa3.85□□□□□ -1.79
SHU2YDR078C VPS74Q06385 345 aa3.85□□□□□ -1.79
SHU2YDR078C CSR2Q12734 1121 aa3.85□□□□□ -1.79
SHU2YDR078C RPL6BP05739 176 aaKnown RBP3.84□□□□□ -1.79
SHU2YDR078C PHO84P25297 587 aaKnown RBP3.84□□□□□ -1.79
SHU2YDR078C RIM1P32445 135 aaKnown RBP3.84□□□□□ -1.79
SHU2YDR078C YSW1P38280 609 aa3.84□□□□□ -1.79
SHU2YDR078C GDT1P38301 280 aaPredicted RBP3.84□□□□□ -1.79
SHU2YDR078C ARC40P38328 384 aaKnown RBP3.84□□□□□ -1.79
SHU2YDR078C WSS1P38838 269 aa3.84□□□□□ -1.79
SHU2YDR078C PCP1P53259 346 aa3.84□□□□□ -1.79
SHU2YDR078C RPL6AQ02326 176 aaKnown RBP3.84□□□□□ -1.79
SHU2YDR078C TAF12Q03761 539 aa3.84□□□□□ -1.79
SHU2YDR078C PPM1Q04081 328 aa3.84□□□□□ -1.79
SHU2YDR078C YDR341CQ05506 607 aaKnown RBP3.84□□□□□ -1.79
SHU2YDR078C NDL1Q06568 189 aa3.84□□□□□ -1.79
SHU2YDR078C BUG1Q12191 341 aa3.84□□□□□ -1.79
SHU2YDR078C PDE2P06776 526 aa3.83□□□□□ -1.8
SHU2YDR078C SMY1P32364 656 aaKnown RBP3.83□□□□□ -1.8
SHU2YDR078C SIP2P34164 415 aaKnown RBP3.83□□□□□ -1.8
SHU2YDR078C ADH5P38113 351 aaKnown RBP3.83□□□□□ -1.8
SHU2YDR078C PFF1P38244 976 aa3.83□□□□□ -1.8
SHU2YDR078C RRP4P38792 359 aaKnown RBP3.83□□□□□ -1.8
SHU2YDR078C ISC1P40015 477 aaKnown RBP3.83□□□□□ -1.8
SHU2YDR078C ELP2P42935 788 aa3.83□□□□□ -1.8
SHU2YDR078C PNG1Q02890 363 aa3.83□□□□□ -1.8
SHU2YDR078C DIG1Q03063 452 aaKnown RBP3.83□□□□□ -1.8
SHU2YDR078C RUP1Q12242 671 aa3.83□□□□□ -1.8
SHU2YDR078C TFB5Q3E7C1 72 aaPredicted RBP3.83□□□□□ -1.8
SHU2YDR078C VMA2P16140 517 aaKnown RBP3.82□□□□□ -1.8
SHU2YDR078C SPC110P32380 944 aa3.82□□□□□ -1.8
SHU2YDR078C TOA1P32773 286 aa3.82□□□□□ -1.8
SHU2YDR078C FRE2P36033 711 aa3.82□□□□□ -1.8
SHU2YDR078C RSM22P36056 628 aa3.82□□□□□ -1.8
SHU2YDR078C UIP5P36137 443 aa3.82□□□□□ -1.8
SHU2YDR078C MRPL4P36517 319 aa3.82□□□□□ -1.8
SHU2YDR078C SIF2P38262 535 aa3.82□□□□□ -1.8
SHU2YDR078C YAL037WP39728 267 aa3.82□□□□□ -1.8
SHU2YDR078C GAT2P40209 560 aa3.82□□□□□ -1.8
SHU2YDR078C DIM1P41819 318 aaKnown RBP3.82□□□□□ -1.8
SHU2YDR078C GWT1P47026 490 aa3.82□□□□□ -1.8
SHU2YDR078C YIP1P53039 248 aa3.82□□□□□ -1.8
SHU2YDR078C MEH1Q02205 184 aa3.82□□□□□ -1.8
SHU2YDR078C RPM2Q02773 1202 aa3.82□□□□□ -1.8
SHU2YDR078C GIP3Q03016 1276 aa3.82□□□□□ -1.8
SHU2YDR078C GEP3Q08622 556 aa3.82□□□□□ -1.8
SHU2YDR078C ALG1P16661 449 aa3.81□□□□□ -1.8
SHU2YDR078C DAP2P18962 818 aa3.81□□□□□ -1.8
SHU2YDR078C CTR86P25355 563 aa3.81□□□□□ -1.8
SHU2YDR078C YCR043CP25361 127 aa3.81□□□□□ -1.8
SHU2YDR078C HSP104P31539 908 aaKnown RBP3.81□□□□□ -1.8
SHU2YDR078C TRS65P32893 560 aa3.81□□□□□ -1.8
SHU2YDR078C YCR041WP37265 110 aa3.81□□□□□ -1.8
SHU2YDR078C GPI16P38875 610 aa3.81□□□□□ -1.8
SHU2YDR078C STN1P38960 494 aa3.81□□□□□ -1.8
SHU2YDR078C YIL169CP40442 995 aa3.81□□□□□ -1.8
SHU2YDR078C YPS6P40583 537 aa3.81□□□□□ -1.8
SHU2YDR078C TES1P41903 349 aaKnown RBP3.81□□□□□ -1.8
SHU2YDR078C EPL1P43572 832 aa3.81□□□□□ -1.8
SHU2YDR078C IKS1P47042 667 aa3.81□□□□□ -1.8
SHU2YDR078C YDR541CQ03049 344 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms