RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	RFC3	P38629	340 aa		5.23	□□□□□ -1.57
RPN5	YDL147W	POP2	P39008	433 aa		5.23	□□□□□ -1.57
RPN5	YDL147W	PCI8	P40512	444 aa		5.23	□□□□□ -1.57
RPN5	YDL147W	MDM30	Q05930	598 aa		5.23	□□□□□ -1.57
RPN5	YDL147W	HIS4	P00815	799 aa	Known RBP	5.23	□□□□□ -1.57
RPN5	YDL147W	SEC63	P14906	663 aa		5.23	□□□□□ -1.57
RPN5	YDL147W	RAD24	P32641	659 aa		5.23	□□□□□ -1.57
RPN5	YDL147W	FRE1	P32791	686 aa		5.23	□□□□□ -1.57
RPN5	YDL147W	RPS0A	P32905	252 aa	Known RBP	5.23	□□□□□ -1.57
RPN5	YDL147W	PFF1	P38244	976 aa		5.23	□□□□□ -1.57
RPN5	YDL147W	GND1	P38720	489 aa	Known RBP	5.23	□□□□□ -1.57
RPN5	YDL147W	AZF1	P41696	914 aa		5.23	□□□□□ -1.57
RPN5	YDL147W	ELP2	P42935	788 aa		5.23	□□□□□ -1.57
RPN5	YDL147W	TOF1	P53840	1238 aa		5.23	□□□□□ -1.57
RPN5	YDL147W	KTR5	P53966	522 aa	Predicted RBP	5.23	□□□□□ -1.57
RPN5	YDL147W	IRC15	Q02733	499 aa		5.23	□□□□□ -1.57
RPN5	YDL147W	RPN9	Q04062	393 aa	Known RBP	5.23	□□□□□ -1.57
RPN5	YDL147W	MRPL51	Q06090	140 aa	Predicted RBP	5.23	□□□□□ -1.57
RPN5	YDL147W	VPS74	Q06385	345 aa		5.23	□□□□□ -1.57
RPN5	YDL147W	REX4	Q08237	289 aa		5.23	□□□□□ -1.57
RPN5	YDL147W	PPZ1	P26570	692 aa		5.22	□□□□□ -1.57
RPN5	YDL147W	ERG1	P32476	496 aa	Known RBP	5.22	□□□□□ -1.57
RPN5	YDL147W	TRS65	P32893	560 aa		5.22	□□□□□ -1.57
RPN5	YDL147W	SOR1	P35497	357 aa	Known RBP	5.22	□□□□□ -1.57
RPN5	YDL147W	ISC1	P40015	477 aa	Known RBP	5.22	□□□□□ -1.57
RPN5	YDL147W	BNA5	Q05979	453 aa		5.22	□□□□□ -1.57
RPN5	YDL147W	SYO1	Q07395	620 aa		5.22	□□□□□ -1.57
RPN5	YDL147W	SOR2	Q07786	357 aa		5.22	□□□□□ -1.57
RPN5	YDL147W	YDL009C	Q12210	107 aa		5.22	□□□□□ -1.57
RPN5	YDL147W	RKM5	Q12367	367 aa		5.22	□□□□□ -1.57
RPN5	YDL147W	YCP4	P25349	247 aa	Known RBP	5.21	□□□□□ -1.58
RPN5	YDL147W	MRPL4	P36517	319 aa		5.21	□□□□□ -1.58
RPN5	YDL147W	PCP1	P53259	346 aa		5.21	□□□□□ -1.58
RPN5	YDL147W	PNG1	Q02890	363 aa		5.21	□□□□□ -1.58
RPN5	YDL147W	TFB5	Q3E7C1	72 aa	Predicted RBP	5.21	□□□□□ -1.58
RPN5	YDL147W	ADE4	P04046	510 aa	Known RBP	5.2	□□□□□ -1.58
RPN5	YDL147W	POT1	P27796	417 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
RPN5	YDL147W	HSP104	P31539	908 aa	Known RBP	5.2	□□□□□ -1.58
RPN5	YDL147W	ECM25	P32525	599 aa		5.2	□□□□□ -1.58
RPN5	YDL147W	FRE2	P36033	711 aa		5.2	□□□□□ -1.58
RPN5	YDL147W	UIP5	P36137	443 aa		5.2	□□□□□ -1.58
RPN5	YDL147W	YSW1	P38280	609 aa		5.2	□□□□□ -1.58
RPN5	YDL147W	PCF11	P39081	626 aa	Predicted RBP	5.2	□□□□□ -1.58
RPN5	YDL147W	YIR014W	P40570	242 aa		5.2	□□□□□ -1.58
RPN5	YDL147W	TRS85	P46944	698 aa		5.2	□□□□□ -1.58
RPN5	YDL147W	PHO86	P46956	311 aa		5.2	□□□□□ -1.58
RPN5	YDL147W	RBA50	Q04418	439 aa		5.2	□□□□□ -1.58
RPN5	YDL147W	YLR281C	Q05863	155 aa		5.2	□□□□□ -1.58
RPN5	YDL147W	DSE3	Q08729	430 aa		5.2	□□□□□ -1.58
RPN5	YDL147W	TAD3	Q9URQ3	322 aa		5.2	□□□□□ -1.58
RPN5	YDL147W	YAR066W	P0CX18	203 aa		5.19	□□□□□ -1.58
RPN5	YDL147W	YHR214W	P0CX19	203 aa		5.19	□□□□□ -1.58
RPN5	YDL147W	ALG1	P16661	449 aa		5.19	□□□□□ -1.58
RPN5	YDL147W	SMY1	P32364	656 aa	Known RBP	5.19	□□□□□ -1.58
RPN5	YDL147W	ASK1	P35734	292 aa		5.19	□□□□□ -1.58
RPN5	YDL147W	VPS52	P39904	641 aa		5.19	□□□□□ -1.58
RPN5	YDL147W	GUF1	P46943	645 aa		5.19	□□□□□ -1.58
RPN5	YDL147W	YMR087W	Q04299	284 aa		5.19	□□□□□ -1.58
RPN5	YDL147W	YDR341C	Q05506	607 aa	Known RBP	5.19	□□□□□ -1.58
RPN5	YDL147W	YLL056C	Q12177	298 aa		5.19	□□□□□ -1.58
RPN5	YDL147W	RUP1	Q12242	671 aa		5.19	□□□□□ -1.58
RPN5	YDL147W	CSR2	Q12734	1121 aa		5.19	□□□□□ -1.58
RPN5	YDL147W	SIF2	P38262	535 aa		5.18	□□□□□ -1.58
RPN5	YDL147W	PCA1	P38360	1216 aa		5.18	□□□□□ -1.58
RPN5	YDL147W	MLH1	P38920	769 aa		5.18	□□□□□ -1.58
RPN5	YDL147W	BRO1	P48582	844 aa		5.18	□□□□□ -1.58
RPN5	YDL147W	SCW4	P53334	386 aa	Known RBP	5.18	□□□□□ -1.58
RPN5	YDL147W	NDL1	Q06568	189 aa		5.18	□□□□□ -1.58
RPN5	YDL147W	YFH1	Q07540	174 aa		5.18	□□□□□ -1.58
RPN5	YDL147W	MLH2	Q07980	695 aa		5.18	□□□□□ -1.58
RPN5	YDL147W	CYB2	P00175	591 aa		5.17	□□□□□ -1.58
RPN5	YDL147W	GLN3	P18494	730 aa		5.17	□□□□□ -1.58
RPN5	YDL147W	YCR100C	P25606	316 aa		5.17	□□□□□ -1.58
RPN5	YDL147W	PHO91	P27514	894 aa		5.17	□□□□□ -1.58
RPN5	YDL147W	RRP4	P38792	359 aa	Known RBP	5.17	□□□□□ -1.58
RPN5	YDL147W	GAT2	P40209	560 aa		5.17	□□□□□ -1.58
RPN5	YDL147W	FYV8	P46949	817 aa	Known RBP	5.17	□□□□□ -1.58
RPN5	YDL147W	HMS2	P47175	358 aa		5.17	□□□□□ -1.58
RPN5	YDL147W	YIP1	P53039	248 aa		5.17	□□□□□ -1.58
RPN5	YDL147W	GIP3	Q03016	1276 aa		5.17	□□□□□ -1.58
RPN5	YDL147W	YDR541C	Q03049	344 aa		5.17	□□□□□ -1.58
RPN5	YDL147W	RLI1	Q03195	608 aa	Known RBP	5.17	□□□□□ -1.58
RPN5	YDL147W	TAF12	Q03761	539 aa		5.17	□□□□□ -1.58
RPN5	YDL147W	YPT1	P01123	206 aa	Known RBP	5.16	□□□□□ -1.58
RPN5	YDL147W	YFL068W	P0CX99	160 aa		5.16	□□□□□ -1.58
RPN5	YDL147W	YLL066W-A	P0CY00	160 aa		5.16	□□□□□ -1.58
RPN5	YDL147W	YLL067W-A	P0CY01	160 aa		5.16	□□□□□ -1.58
RPN5	YDL147W	AMD1	P15274	810 aa	Known RBP	5.16	□□□□□ -1.58
RPN5	YDL147W	CYS4	P32582	507 aa	Known RBP	5.16	□□□□□ -1.58
RPN5	YDL147W	SIP2	P34164	415 aa	Known RBP	5.16	□□□□□ -1.58
RPN5	YDL147W	RIM2	P38127	377 aa		5.16	□□□□□ -1.58
RPN5	YDL147W	CHS6	P40955	746 aa		5.16	□□□□□ -1.58
RPN5	YDL147W	DIM1	P41819	318 aa	Known RBP	5.16	□□□□□ -1.58
RPN5	YDL147W	YMR034C	Q05131	434 aa	Predicted RBP	5.16	□□□□□ -1.58
RPN5	YDL147W	DBP9	Q06218	594 aa	Known RBP	5.16	□□□□□ -1.58
RPN5	YDL147W	NSE1	Q07913	336 aa		5.16	□□□□□ -1.58
RPN5	YDL147W	MUM3	Q08750	479 aa		5.16	□□□□□ -1.58
RPN5	YDL147W	COX3	P00420	269 aa		5.15	□□□□□ -1.59
RPN5	YDL147W	DAP2	P18962	818 aa		5.15	□□□□□ -1.59
RPN5	YDL147W	YCR041W	P37265	110 aa		5.15	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms