RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	PDR11	P40550	1411 aa		5.53	□□□□□ -1.52
SIR2	YDL042C	CAR1	P00812	333 aa	Known RBP	5.53	□□□□□ -1.52
SIR2	YDL042C	EXO70	P19658	623 aa		5.53	□□□□□ -1.52
SIR2	YDL042C	YME2	P32843	850 aa		5.53	□□□□□ -1.52
SIR2	YDL042C	SIP2	P34164	415 aa	Known RBP	5.53	□□□□□ -1.52
SIR2	YDL042C	CBP4	P37267	147 aa		5.53	□□□□□ -1.52
SIR2	YDL042C	SRP72	P38688	640 aa	Known RBP	5.53	□□□□□ -1.52
SIR2	YDL042C	FMS1	P50264	508 aa		5.53	□□□□□ -1.52
SIR2	YDL042C	KAP120	Q02932	1032 aa		5.53	□□□□□ -1.52
SIR2	YDL042C	RLI1	Q03195	608 aa	Known RBP	5.53	□□□□□ -1.52
SIR2	YDL042C	RRP45	Q05636	305 aa	Known RBP	5.53	□□□□□ -1.52
SIR2	YDL042C	KEL3	Q08979	651 aa	Predicted RBP	5.53	□□□□□ -1.52
SIR2	YDL042C	YDL009C	Q12210	107 aa		5.53	□□□□□ -1.52
SIR2	YDL042C	IKS1	P47042	667 aa		5.52	□□□□□ -1.53
SIR2	YDL042C	YLR345W	Q06137	509 aa		5.52	□□□□□ -1.53
SIR2	YDL042C	GRS2	Q06817	618 aa		5.52	□□□□□ -1.53
SIR2	YDL042C	RKM5	Q12367	367 aa		5.52	□□□□□ -1.53
SIR2	YDL042C	GPH1	P06738	902 aa	Known RBP	5.51	□□□□□ -1.53
SIR2	YDL042C	SNT1	P25357	1226 aa		5.51	□□□□□ -1.53
SIR2	YDL042C	SEC1	P30619	724 aa	Known RBP	5.51	□□□□□ -1.53
SIR2	YDL042C	GYP6	P32806	458 aa		5.51	□□□□□ -1.53
SIR2	YDL042C	NTC20	P38302	140 aa	Predicted RBP	5.51	□□□□□ -1.53
SIR2	YDL042C	SNM1	P40993	198 aa		5.51	□□□□□ -1.53
SIR2	YDL042C	RSC1	P53236	928 aa		5.51	□□□□□ -1.53
SIR2	YDL042C	IRC15	Q02733	499 aa		5.51	□□□□□ -1.53
SIR2	YDL042C	SOV1	Q04748	898 aa		5.51	□□□□□ -1.53
SIR2	YDL042C	RRD2	Q12461	358 aa		5.51	□□□□□ -1.53
SIR2	YDL042C	GCN2	P15442	1659 aa		5.5	□□□□□ -1.53
SIR2	YDL042C	LEU4	P06208	619 aa	Known RBP	5.5	□□□□□ -1.53
SIR2	YDL042C	CLB1	P24868	471 aa		5.5	□□□□□ -1.53
SIR2	YDL042C	URA7	P28274	579 aa	Known RBP	5.5	□□□□□ -1.53
SIR2	YDL042C	ARA1	P38115	344 aa		5.5	□□□□□ -1.53
SIR2	YDL042C	FAU1	P40099	211 aa		5.5	□□□□□ -1.53
SIR2	YDL042C	YGL138C	P53122	345 aa		5.5	□□□□□ -1.53
SIR2	YDL042C	KTR5	P53966	522 aa	Predicted RBP	5.5	□□□□□ -1.53
SIR2	YDL042C	DON1	Q05610	365 aa		5.5	□□□□□ -1.53
SIR2	YDL042C	HOM3	P10869	527 aa		5.5	□□□□□ -1.53
SIR2	YDL042C	BUB3	P26449	341 aa		5.5	□□□□□ -1.53
SIR2	YDL042C	TFB1	P32776	642 aa		5.5	□□□□□ -1.53
SIR2	YDL042C	NIP100	P33420	868 aa		5.5	□□□□□ -1.53
SIR2	YDL042C	VHC1	P38329	1120 aa		5.5	□□□□□ -1.53
SIR2	YDL042C	YML6	P51998	286 aa		5.5	□□□□□ -1.53
SIR2	YDL042C	VPS74	Q06385	345 aa		5.5	□□□□□ -1.53
SIR2	YDL042C	USO1	P25386	1790 aa		5.49	□□□□□ -1.53
SIR2	YDL042C	REC114	P32841	428 aa		5.49	□□□□□ -1.53
SIR2	YDL042C	TFG2	P41896	400 aa	Predicted RBP	5.49	□□□□□ -1.53
SIR2	YDL042C	COS5	P47187	383 aa		5.49	□□□□□ -1.53
SIR2	YDL042C	NCS2	P53923	493 aa	Predicted RBP	5.49	□□□□□ -1.53
SIR2	YDL042C	RPM2	Q02773	1202 aa		5.49	□□□□□ -1.53
SIR2	YDL042C	COS7	Q07788	383 aa		5.49	□□□□□ -1.53
SIR2	YDL042C	MRS3	P10566	314 aa		5.48	□□□□□ -1.53
SIR2	YDL042C	SRV2	P17555	526 aa	Known RBP	5.48	□□□□□ -1.53
SIR2	YDL042C	ERV1	P27882	189 aa		5.48	□□□□□ -1.53
SIR2	YDL042C	PTR2	P32901	601 aa		5.48	□□□□□ -1.53
SIR2	YDL042C	YJL070C	P40361	888 aa		5.48	□□□□□ -1.53
SIR2	YDL042C	ZIM17	P42844	174 aa		5.48	□□□□□ -1.53
SIR2	YDL042C	OGG1	P53397	376 aa	Predicted RBP	5.48	□□□□□ -1.53
SIR2	YDL042C	TY1B-NL2	Q99337	1749 aa	Known RBP	5.47	□□□□□ -1.53
SIR2	YDL042C	RIP1	P08067	215 aa		5.47	□□□□□ -1.53
SIR2	YDL042C	PRP21	P32524	280 aa	Predicted RBP	5.47	□□□□□ -1.53
SIR2	YDL042C	APE3	P37302	537 aa	Known RBP	5.47	□□□□□ -1.53
SIR2	YDL042C	ELP2	P42935	788 aa		5.47	□□□□□ -1.53
SIR2	YDL042C	CAK1	P43568	368 aa	Predicted RBP	5.47	□□□□□ -1.53
SIR2	YDL042C	SKO1	Q02100	647 aa		5.47	□□□□□ -1.53
SIR2	YDL042C	AIM32	Q04689	311 aa		5.47	□□□□□ -1.53
SIR2	YDL042C	DAP1	Q12091	152 aa		5.47	□□□□□ -1.53
SIR2	YDL042C	NDC1	P32500	655 aa		5.47	□□□□□ -1.53
SIR2	YDL042C	ART5	P53244	586 aa	Known RBP	5.47	□□□□□ -1.53
SIR2	YDL042C	VAM3	Q12241	283 aa		5.47	□□□□□ -1.53
SIR2	YDL042C	MTF1	P14908	341 aa	Known RBP	5.46	□□□□□ -1.54
SIR2	YDL042C	PIM1	P36775	1133 aa		5.46	□□□□□ -1.54
SIR2	YDL042C	HSP31	Q04432	237 aa		5.46	□□□□□ -1.54
SIR2	YDL042C	HSP42	Q12329	375 aa		5.46	□□□□□ -1.54
SIR2	YDL042C	FRE2	P36033	711 aa		5.45	□□□□□ -1.54
SIR2	YDL042C	CCT2	P39076	527 aa	Known RBP	5.45	□□□□□ -1.54
SIR2	YDL042C	RPS0B	P46654	252 aa	Known RBP	5.45	□□□□□ -1.54
SIR2	YDL042C	RTT101	P47050	842 aa		5.45	□□□□□ -1.54
SIR2	YDL042C	TCB2	P48231	1178 aa		5.45	□□□□□ -1.54
SIR2	YDL042C	HCR1	Q05775	265 aa	Known RBP	5.45	□□□□□ -1.54
SIR2	YDL042C	YLR278C	Q05854	1341 aa		5.45	□□□□□ -1.54
SIR2	YDL042C	CPR2	P23285	205 aa		5.44	□□□□□ -1.54
SIR2	YDL042C	YCR022C	P25620	114 aa		5.44	□□□□□ -1.54
SIR2	YDL042C	RSM22	P36056	628 aa		5.44	□□□□□ -1.54
SIR2	YDL042C	ISC1	P40015	477 aa	Known RBP	5.44	□□□□□ -1.54
SIR2	YDL042C	GWT1	P47026	490 aa		5.44	□□□□□ -1.54
SIR2	YDL042C	DSL1	P53847	754 aa		5.44	□□□□□ -1.54
SIR2	YDL042C	PEX5	P35056	612 aa		5.43	□□□□□ -1.54
SIR2	YDL042C	SHO1	P40073	367 aa		5.43	□□□□□ -1.54
SIR2	YDL042C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	5.43	□□□□□ -1.54	not detected
SIR2	YDL042C	SIN4	P32259	974 aa		5.43	□□□□□ -1.54
SIR2	YDL042C	HIR2	P32480	875 aa		5.43	□□□□□ -1.54
SIR2	YDL042C	RRT2	P38332	387 aa		5.43	□□□□□ -1.54
SIR2	YDL042C	MTC4	P38335	694 aa	Known RBP	5.43	□□□□□ -1.54
SIR2	YDL042C	RTT107	P38850	1070 aa		5.43	□□□□□ -1.54
SIR2	YDL042C	HOT1	Q03213	719 aa		5.43	□□□□□ -1.54
SIR2	YDL042C	YDR387C	Q04162	555 aa		5.43	□□□□□ -1.54
SIR2	YDL042C	CFT1	Q06632	1357 aa	Known RBP	5.42	□□□□□ -1.54
SIR2	YDL042C	SEC63	P14906	663 aa		5.42	□□□□□ -1.54
SIR2	YDL042C	URA4	P20051	364 aa		5.42	□□□□□ -1.54
SIR2	YDL042C	KRE2	P27809	442 aa		5.42	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 51.9 ms